RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SULT6B1Q6IMI4 303 aa18.63■□□□□ 0.57
HLA-C-210ENST00000640219 STYK1Q6J9G0 422 aa18.63■□□□□ 0.57
HLA-C-210ENST00000640219 BEGAINQ9BUH8 593 aa18.63■□□□□ 0.57
HLA-C-210ENST00000640219 LGR6Q9HBX8 967 aa18.63■□□□□ 0.57
HLA-C-210ENST00000640219 EIF5P55010 431 aaKnown RBP18.62■□□□□ 0.57
HLA-C-210ENST00000640219 PNMA8AQ86V59 439 aaPredicted RBP18.62■□□□□ 0.57
HLA-C-210ENST00000640219 VSIG10Q8N0Z9 540 aa18.62■□□□□ 0.57
HLA-C-210ENST00000640219 SLX4Q8IY92 1834 aa18.61■□□□□ 0.57
HLA-C-210ENST00000640219 ZNF541Q9H0D2 1346 aa18.61■□□□□ 0.57
HLA-C-210ENST00000640219 NPHP1O15259 732 aa18.61■□□□□ 0.57
HLA-C-210ENST00000640219 CFAP44Q96MT7 982 aa18.61■□□□□ 0.57
HLA-C-210ENST00000640219 RNMTO43148 476 aaKnown RBP18.6■□□□□ 0.57
HLA-C-210ENST00000640219 STARD3NLO95772 234 aa18.6■□□□□ 0.57
HLA-C-210ENST00000640219 SRGNP10124 158 aa18.6■□□□□ 0.57
HLA-C-210ENST00000640219 MASTLQ96GX5 879 aa18.6■□□□□ 0.57
HLA-C-210ENST00000640219 ADAMTSL1Q8N6G6 1762 aa18.6■□□□□ 0.57
HLA-C-210ENST00000640219 CCDC93Q567U6 631 aa18.59■□□□□ 0.57
HLA-C-210ENST00000640219 PAXIP1Q6ZW49 1069 aaPredicted RBP18.59■□□□□ 0.57
HLA-C-210ENST00000640219 CNBD1Q8NA66 436 aa18.59■□□□□ 0.57
HLA-C-210ENST00000640219 CAPNS2Q96L46 248 aa18.59■□□□□ 0.57
HLA-C-210ENST00000640219 ECE1P42892 770 aa18.58■□□□□ 0.56
HLA-C-210ENST00000640219 ST5P78524 1137 aa18.58■□□□□ 0.56
HLA-C-210ENST00000640219 SETDB2Q96T68 719 aa18.58■□□□□ 0.56
HLA-C-210ENST00000640219 DDX21Q9NR30 783 aaKnown RBP eCLIP18.58■□□□□ 0.56
HLA-C-210ENST00000640219 ZNF277Q9NRM2 450 aaPredicted RBP18.58■□□□□ 0.56
HLA-C-210ENST00000640219 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
HLA-C-210ENST00000640219 RNF123Q5XPI4 1314 aa18.57■□□□□ 0.56
HLA-C-210ENST00000640219 CACNA1SQ13698 1873 aa18.57■□□□□ 0.56
HLA-C-210ENST00000640219 CENPBP07199 599 aaPredicted RBP18.57■□□□□ 0.56
HLA-C-210ENST00000640219 FKBP4Q02790 459 aaKnown RBP eCLIP18.57■□□□□ 0.56
HLA-C-210ENST00000640219 GRM1Q13255 1194 aa18.57■□□□□ 0.56
HLA-C-210ENST00000640219 CNGB1Q14028 1251 aaPredicted RBP18.57■□□□□ 0.56
HLA-C-210ENST00000640219 C7orf43Q8WVR3 580 aa18.57■□□□□ 0.56
HLA-C-210ENST00000640219 GPR101Q96P66 508 aaPredicted RBP18.57■□□□□ 0.56
HLA-C-210ENST00000640219 ZNF330Q9Y3S2 320 aaPredicted RBP18.57■□□□□ 0.56
HLA-C-210ENST00000640219 MRC1P22897 1456 aa18.57■□□□□ 0.56
HLA-C-210ENST00000640219 CYP4F22Q6NT55 531 aa18.56■□□□□ 0.56
HLA-C-210ENST00000640219 TSKSQ9UJT2 592 aa18.56■□□□□ 0.56
HLA-C-210ENST00000640219 MCOLN1Q9GZU1 580 aa18.55■□□□□ 0.56
HLA-C-210ENST00000640219 THSD7BQ9C0I4 1608 aa18.55■□□□□ 0.56
HLA-C-210ENST00000640219 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
HLA-C-210ENST00000640219 SCN7AQ01118 1682 aa18.54■□□□□ 0.56
HLA-C-210ENST00000640219 TTC5Q8N0Z6 440 aa18.53■□□□□ 0.56
HLA-C-210ENST00000640219 GPC2Q8N158 579 aa18.53■□□□□ 0.56
HLA-C-210ENST00000640219 FZD9O00144 591 aa18.52■□□□□ 0.56
HLA-C-210ENST00000640219 IL13P35225 146 aa18.52■□□□□ 0.56
HLA-C-210ENST00000640219 FMR1Q06787 632 aaKnown RBP eCLIP18.52■□□□□ 0.56
HLA-C-210ENST00000640219 NPM2Q86SE8 214 aaKnown RBP18.52■□□□□ 0.56
HLA-C-210ENST00000640219 RTKN2Q8IZC4 609 aa18.52■□□□□ 0.56
HLA-C-210ENST00000640219 CAMTA2O94983 1202 aa18.51■□□□□ 0.55
HLA-C-210ENST00000640219 NPR1P16066 1061 aa18.51■□□□□ 0.55
HLA-C-210ENST00000640219 MAP2K2P36507 400 aa18.51■□□□□ 0.55
HLA-C-210ENST00000640219 IL6STP40189 918 aaPredicted RBP18.51■□□□□ 0.55
HLA-C-210ENST00000640219 IARSP41252 1262 aaKnown RBP18.51■□□□□ 0.55
HLA-C-210ENST00000640219 OLFM4Q6UX06 510 aa18.51■□□□□ 0.55
HLA-C-210ENST00000640219 TEX13AQ9BXU3 409 aaPredicted RBP18.51■□□□□ 0.55
HLA-C-210ENST00000640219 AOC2O75106 756 aa18.5■□□□□ 0.55
HLA-C-210ENST00000640219 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
HLA-C-210ENST00000640219 UBR2Q8IWV8 1755 aa18.5■□□□□ 0.55
HLA-C-210ENST00000640219 TNRC18O15417 2968 aaPredicted RBP18.49■□□□□ 0.55
HLA-C-210ENST00000640219 CA12O43570 354 aa18.49■□□□□ 0.55
HLA-C-210ENST00000640219 LMOD1P29536 600 aaPredicted RBP18.49■□□□□ 0.55
HLA-C-210ENST00000640219 CST9Q5W186 159 aa18.49■□□□□ 0.55
HLA-C-210ENST00000640219 SYNE4Q8N205 404 aa18.49■□□□□ 0.55
HLA-C-210ENST00000640219 ZNF496Q96IT1 587 aaPredicted RBP18.49■□□□□ 0.55
HLA-C-210ENST00000640219 TLL2Q9Y6L7 1015 aa18.49■□□□□ 0.55
HLA-C-210ENST00000640219 DGKZQ13574 1117 aa18.48■□□□□ 0.55
HLA-C-210ENST00000640219 AMER1Q5JTC6 1135 aaPredicted RBP18.48■□□□□ 0.55
HLA-C-210ENST00000640219 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
HLA-C-210ENST00000640219 NBPF5PQ86XG9 351 aaPredicted RBP18.48■□□□□ 0.55
HLA-C-210ENST00000640219 JDP2Q8WYK2 163 aa18.48■□□□□ 0.55
HLA-C-210ENST00000640219 KNSTRNQ9Y448 316 aa18.48■□□□□ 0.55
HLA-C-210ENST00000640219 GJA3Q9Y6H8 435 aa18.48■□□□□ 0.55
HLA-C-210ENST00000640219 HEG1Q9ULI3 1381 aa18.47■□□□□ 0.55
HLA-C-210ENST00000640219 TRAF5O00463 557 aa18.47■□□□□ 0.55
HLA-C-210ENST00000640219 A1BGP04217 495 aa18.47■□□□□ 0.55
HLA-C-210ENST00000640219 MTHFSDQ2M296 383 aaKnown RBP18.47■□□□□ 0.55
HLA-C-210ENST00000640219 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
HLA-C-210ENST00000640219 LTBP1Q14766 1721 aa18.46■□□□□ 0.55
HLA-C-210ENST00000640219 HMOX1P09601 288 aa18.46■□□□□ 0.55
HLA-C-210ENST00000640219 EIF6P56537 245 aaKnown RBP18.46■□□□□ 0.55
HLA-C-210ENST00000640219 KLRG2A4D1S0 409 aaPredicted RBP18.45■□□□□ 0.54
HLA-C-210ENST00000640219 PER1O15534 1290 aaPredicted RBP18.45■□□□□ 0.54
HLA-C-210ENST00000640219 EPS15P42566 896 aa18.45■□□□□ 0.54
HLA-C-210ENST00000640219 ZNF790Q6PG37 636 aa18.45■□□□□ 0.54
HLA-C-210ENST00000640219 CASP8AP2Q9UKL3 1982 aa18.43■□□□□ 0.54
HLA-C-210ENST00000640219 ALDH1B1P30837 517 aa18.43■□□□□ 0.54
HLA-C-210ENST00000640219 SCNN1DP51172 638 aa18.43■□□□□ 0.54
HLA-C-210ENST00000640219 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
HLA-C-210ENST00000640219 USP50Q70EL3 339 aaPredicted RBP18.43■□□□□ 0.54
HLA-C-210ENST00000640219 PSMD1Q99460 953 aa18.43■□□□□ 0.54
HLA-C-210ENST00000640219 TRPM7Q96QT4 1865 aa18.42■□□□□ 0.54
HLA-C-210ENST00000640219 PDE4DIPQ5VU43 2346 aa18.42■□□□□ 0.54
HLA-C-210ENST00000640219 TEFQ10587 303 aa18.42■□□□□ 0.54
HLA-C-210ENST00000640219 CLEC4GQ6UXB4 293 aa18.42■□□□□ 0.54
HLA-C-210ENST00000640219 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
HLA-C-210ENST00000640219 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
HLA-C-210ENST00000640219 SAPCD2Q86UD0 394 aa18.41■□□□□ 0.54
HLA-C-210ENST00000640219 ZNF652Q9Y2D9 606 aa18.41■□□□□ 0.54
HLA-C-210ENST00000640219 BCORQ6W2J9 1755 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms