RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 IL16Q14005 1332 aa28.28■■■□□ 2.12
SCN1B-206ENST00000638536 HDGFL1Q5TGJ6 251 aa28.28■■■□□ 2.12
SCN1B-206ENST00000638536 WDR63Q8IWG1 891 aa28.28■■■□□ 2.12
SCN1B-206ENST00000638536 CHPF2Q9P2E5 772 aa28.28■■■□□ 2.12
SCN1B-206ENST00000638536 SERPINB2P05120 415 aa28.27■■■□□ 2.12
SCN1B-206ENST00000638536 HOXB7P09629 217 aa28.27■■■□□ 2.12
SCN1B-206ENST00000638536 WWC3Q9ULE0 1092 aa28.26■■■□□ 2.11
SCN1B-206ENST00000638536 ZBTB3Q9H5J0 574 aa28.25■■■□□ 2.11
SCN1B-206ENST00000638536 DDX21Q9NR30 783 aaKnown RBP eCLIP28.25■■■□□ 2.11
SCN1B-206ENST00000638536 ZNF521Q96K83 1311 aa28.24■■■□□ 2.11
SCN1B-206ENST00000638536 CLEC4GQ6UXB4 293 aa28.24■■■□□ 2.11
SCN1B-206ENST00000638536 MAP3K15Q6ZN16 1313 aa28.24■■■□□ 2.11
SCN1B-206ENST00000638536 FANCIQ9NVI1 1328 aa28.24■■■□□ 2.11
SCN1B-206ENST00000638536 CCDC24Q8N4L8 307 aa28.23■■■□□ 2.11
SCN1B-206ENST00000638536 CARMIL3Q8ND23 1372 aa28.23■■■□□ 2.11
SCN1B-206ENST00000638536 PXDNLA1KZ92 1463 aa28.23■■■□□ 2.11
SCN1B-206ENST00000638536 A0A0G2JLW4 131 aa28.22■■■□□ 2.11
SCN1B-206ENST00000638536 AIMP1Q12904 312 aaKnown RBP28.22■■■□□ 2.11
SCN1B-206ENST00000638536 COPS6Q7L5N1 327 aa28.22■■■□□ 2.11
SCN1B-206ENST00000638536 XAGE3Q8WTP9 111 aa28.21■■■□□ 2.11
SCN1B-206ENST00000638536 SETDB2Q96T68 719 aa28.21■■■□□ 2.11
SCN1B-206ENST00000638536 PELP1Q8IZL8 1130 aaKnown RBP28.21■■■□□ 2.11
SCN1B-206ENST00000638536 ANKRD31Q8N7Z5 1873 aa28.2■■■□□ 2.11
SCN1B-206ENST00000638536 ERVV-1B6SEH8 477 aa28.2■■■□□ 2.1
SCN1B-206ENST00000638536 YBX3P16989 372 aaKnown RBP eCLIP28.2■■■□□ 2.1
SCN1B-206ENST00000638536 KIF6Q6ZMV9 814 aa28.2■■■□□ 2.1
SCN1B-206ENST00000638536 ZNF652Q9Y2D9 606 aa28.2■■■□□ 2.1
SCN1B-206ENST00000638536 DPEP1P16444 411 aa28.19■■■□□ 2.1
SCN1B-206ENST00000638536 NIP7Q9Y221 180 aaKnown RBP eCLIP28.19■■■□□ 2.1
SCN1B-206ENST00000638536 BRCA1P38398 1863 aaKnown RBP28.19■■■□□ 2.1
SCN1B-206ENST00000638536 PRR5LQ6MZQ0 368 aa28.18■■■□□ 2.1
SCN1B-206ENST00000638536 DBF4Q9UBU7 674 aaPredicted RBP28.18■■■□□ 2.1
SCN1B-206ENST00000638536 KCNA3P22001 575 aa28.18■■■□□ 2.1
SCN1B-206ENST00000638536 TGFB2P61812 414 aa28.18■■■□□ 2.1
SCN1B-206ENST00000638536 TCERG1O14776 1098 aaKnown RBP28.17■■■□□ 2.1
SCN1B-206ENST00000638536 RGL2O15211 777 aa28.17■■■□□ 2.1
SCN1B-206ENST00000638536 CHRNA5P30532 468 aa28.17■■■□□ 2.1
SCN1B-206ENST00000638536 GPR162Q16538 588 aa28.17■■■□□ 2.1
SCN1B-206ENST00000638536 TWISTNBQ3B726 338 aaPredicted RBP28.17■■■□□ 2.1
SCN1B-206ENST00000638536 FAM177BA6PVY3 158 aa28.16■■■□□ 2.1
SCN1B-206ENST00000638536 EXOSC9Q06265 439 aaKnown RBP28.16■■■□□ 2.1
SCN1B-206ENST00000638536 GIGYF2Q6Y7W6 1299 aaKnown RBP28.16■■■□□ 2.1
SCN1B-206ENST00000638536 PHAXQ9H814 394 aaKnown RBP28.16■■■□□ 2.1
SCN1B-206ENST00000638536 GPTP24298 496 aa28.15■■■□□ 2.1
SCN1B-206ENST00000638536 UBN2Q6ZU65 1347 aa28.14■■■□□ 2.1
SCN1B-206ENST00000638536 GOLGA2Q08379 1002 aa28.13■■■□□ 2.09
SCN1B-206ENST00000638536 HYPKQ9NX55 129 aa28.13■■■□□ 2.09
SCN1B-206ENST00000638536 ATP10DQ9P241 1426 aa28.12■■■□□ 2.09
SCN1B-206ENST00000638536 DCAF8L1A6NGE4 600 aa28.12■■■□□ 2.09
SCN1B-206ENST00000638536 NBPF5PQ86XG9 351 aaPredicted RBP28.12■■■□□ 2.09
SCN1B-206ENST00000638536 ZNF34Q8IZ26 560 aa28.12■■■□□ 2.09
SCN1B-206ENST00000638536 CNBD1Q8NA66 436 aa28.12■■■□□ 2.09
SCN1B-206ENST00000638536 VAMP4O75379 141 aa28.11■■■□□ 2.09
SCN1B-206ENST00000638536 CCDC30Q5VVM6 783 aa28.11■■■□□ 2.09
SCN1B-206ENST00000638536 ANKRD36CQ5JPF3 1778 aa28.11■■■□□ 2.09
SCN1B-206ENST00000638536 CDCA7LQ96GN5 454 aa28.1■■■□□ 2.09
SCN1B-206ENST00000638536 MYH16Q9H6N6 1097 aa28.1■■■□□ 2.09
SCN1B-206ENST00000638536 COL11A2P13942 1736 aaPredicted RBP28.09■■■□□ 2.09
SCN1B-206ENST00000638536 SUSD4Q5VX71 490 aa28.09■■■□□ 2.09
SCN1B-206ENST00000638536 ARFGEF2Q9Y6D5 1785 aa28.08■■■□□ 2.09
SCN1B-206ENST00000638536 ANKRD13DQ6ZTN6 518 aa28.08■■■□□ 2.09
SCN1B-206ENST00000638536 ZNF428Q96B54 188 aa28.08■■■□□ 2.09
SCN1B-206ENST00000638536 DLEC1Q9Y238 1755 aa28.08■■■□□ 2.09
SCN1B-206ENST00000638536 NPHP1O15259 732 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 NUTM1Q86Y26 1132 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 PLBD2Q8NHP8 589 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 BRIP1Q9BX63 1249 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 TPTE2Q6XPS3 522 aa28.07■■■□□ 2.08
SCN1B-206ENST00000638536 CHD4Q14839 1912 aa28.06■■■□□ 2.08
SCN1B-206ENST00000638536 G2E3Q7L622 706 aa28.06■■■□□ 2.08
SCN1B-206ENST00000638536 C2CD5Q86YS7 1000 aa28.06■■■□□ 2.08
SCN1B-206ENST00000638536 BCS1LQ9Y276 419 aa28.06■■■□□ 2.08
SCN1B-206ENST00000638536 CACNA1FO60840 1977 aa28.05■■■□□ 2.08
SCN1B-206ENST00000638536 SLFN5Q08AF3 891 aa28.05■■■□□ 2.08
SCN1B-206ENST00000638536 TCIRG1Q13488 830 aa28.05■■■□□ 2.08
SCN1B-206ENST00000638536 PIM2Q9P1W9 311 aa28.05■■■□□ 2.08
SCN1B-206ENST00000638536 ST5P78524 1137 aa28.04■■■□□ 2.08
SCN1B-206ENST00000638536 ABCC12Q96J65 1359 aa28.04■■■□□ 2.08
SCN1B-206ENST00000638536 TNRC6CQ9HCJ0 1690 aaKnown RBP28.03■■■□□ 2.08
SCN1B-206ENST00000638536 NTSR2O95665 410 aa28.03■■■□□ 2.08
SCN1B-206ENST00000638536 SLC4A2P04920 1241 aa28.03■■■□□ 2.08
SCN1B-206ENST00000638536 ERFEQ4G0M1 354 aa28.03■■■□□ 2.08
SCN1B-206ENST00000638536 ARFGEF1Q9Y6D6 1849 aa28.03■■■□□ 2.08
SCN1B-206ENST00000638536 E9PSI1 815 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 ATP5J2-PTCD1G3V325 749 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 H0YIN7 160 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 PDE6BP35913 854 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 NLRP10Q86W26 655 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 STK31Q9BXU1 1019 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 CACNA1SQ13698 1873 aa28.02■■■□□ 2.08
SCN1B-206ENST00000638536 GRIN3BO60391 1043 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 HSP90AB3PQ58FF7 597 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 RIC3Q7Z5B4 369 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 SYNE4Q8N205 404 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 CHMP4AQ9BY43 222 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 GTF2E1P29083 439 aaPredicted RBP28■■■□□ 2.07
SCN1B-206ENST00000638536 PARP10Q53GL7 1025 aa28■■■□□ 2.07
SCN1B-206ENST00000638536 DALRD3Q5D0E6 543 aaKnown RBP28■■■□□ 2.07
SCN1B-206ENST00000638536 TRMT2AQ8IZ69 625 aaKnown RBP28■■■□□ 2.07
SCN1B-206ENST00000638536 ISCA1Q9BUE6 129 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms