RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 AK2P54819 239 aa17.5■□□□□ 0.39
CLN6-215ENST00000636674 CCDC183Q5T5S1 534 aa17.5■□□□□ 0.39
CLN6-215ENST00000636674 CHPF2Q9P2E5 772 aa17.5■□□□□ 0.39
CLN6-215ENST00000636674 RGPD2P0DJD1 1756 aa17.5■□□□□ 0.39
CLN6-215ENST00000636674 RUFY3Q7L099 469 aa17.5■□□□□ 0.39
CLN6-215ENST00000636674 RASEFQ8IZ41 740 aa17.5■□□□□ 0.39
CLN6-215ENST00000636674 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
CLN6-215ENST00000636674 PDCL3Q9H2J4 239 aa17.5■□□□□ 0.39
CLN6-215ENST00000636674 CAMTA1Q9Y6Y1 1673 aa17.49■□□□□ 0.39
CLN6-215ENST00000636674 PI4KAP2A4QPH2 592 aa17.49■□□□□ 0.39
CLN6-215ENST00000636674 PIP4K2BP78356 416 aa17.49■□□□□ 0.39
CLN6-215ENST00000636674 PI4KAP1Q8N8J0 262 aa17.49■□□□□ 0.39
CLN6-215ENST00000636674 RUFY2Q8WXA3 655 aa17.49■□□□□ 0.39
CLN6-215ENST00000636674 TM6SF1Q9BZW5 370 aa17.49■□□□□ 0.39
CLN6-215ENST00000636674 SIPA1L3O60292 1781 aaPredicted RBP17.49■□□□□ 0.39
CLN6-215ENST00000636674 STX6O43752 255 aa17.48■□□□□ 0.39
CLN6-215ENST00000636674 MAP4K4O95819 1239 aaPredicted RBP17.48■□□□□ 0.39
CLN6-215ENST00000636674 UBE2HP62256 183 aa17.48■□□□□ 0.39
CLN6-215ENST00000636674 XPCQ01831 940 aaPredicted RBP17.48■□□□□ 0.39
CLN6-215ENST00000636674 LTV1Q96GA3 475 aaPredicted RBP17.48■□□□□ 0.39
CLN6-215ENST00000636674 GDPD2Q9HCC8 539 aa17.48■□□□□ 0.39
CLN6-215ENST00000636674 ATP6V1DQ9Y5K8 247 aa17.48■□□□□ 0.39
CLN6-215ENST00000636674 ALDH1L1O75891 902 aa17.48■□□□□ 0.39
CLN6-215ENST00000636674 F13A1P00488 732 aa17.48■□□□□ 0.39
CLN6-215ENST00000636674 NUTM2GQ5VZR2 741 aa17.48■□□□□ 0.39
CLN6-215ENST00000636674 ADAMTS7Q9UKP4 1686 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 SYT1P21579 422 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 VPS53Q5VIR6 699 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 USHBP1Q8N6Y0 703 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 DCCP43146 1447 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 HEG1Q9ULI3 1381 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
CLN6-215ENST00000636674 AKAP4Q5JQC9 854 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 ERC1Q8IUD2 1116 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 SH2B1Q9NRF2 756 aaPredicted RBP17.47■□□□□ 0.39
CLN6-215ENST00000636674 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 HDAC5Q9UQL6 1122 aa17.47■□□□□ 0.39
CLN6-215ENST00000636674 R3HCC1Q9Y3T6 440 aaKnown RBP17.47■□□□□ 0.39
CLN6-215ENST00000636674 NBPF6Q5VWK0 638 aa17.46■□□□□ 0.39
CLN6-215ENST00000636674 CWC27Q6UX04 472 aaKnown RBP17.46■□□□□ 0.39
CLN6-215ENST00000636674 C14orf37Q86TY3 774 aa17.46■□□□□ 0.39
CLN6-215ENST00000636674 CLASRPQ8N2M8 674 aaKnown RBP17.46■□□□□ 0.39
CLN6-215ENST00000636674 ZSCAN31Q96LW9 406 aaPredicted RBP17.46■□□□□ 0.39
CLN6-215ENST00000636674 NBPF4Q96M43 638 aa17.46■□□□□ 0.39
CLN6-215ENST00000636674 C19orf44Q9H6X5 657 aa17.46■□□□□ 0.39
CLN6-215ENST00000636674 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
CLN6-215ENST00000636674 ECHDC1Q9NTX5 307 aa17.46■□□□□ 0.39
CLN6-215ENST00000636674 DBF4Q9UBU7 674 aaPredicted RBP17.46■□□□□ 0.39
CLN6-215ENST00000636674 SMC3Q9UQE7 1217 aa17.46■□□□□ 0.39
CLN6-215ENST00000636674 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
CLN6-215ENST00000636674 ROBO1Q9Y6N7 1651 aa17.46■□□□□ 0.38
CLN6-215ENST00000636674 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
CLN6-215ENST00000636674 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
CLN6-215ENST00000636674 ZSWIM6Q9HCJ5 1215 aa17.45■□□□□ 0.38
CLN6-215ENST00000636674 PHF8Q9UPP1 1060 aa17.45■□□□□ 0.38
CLN6-215ENST00000636674 PDIA4P13667 645 aaKnown RBP17.44■□□□□ 0.38
CLN6-215ENST00000636674 CASTP20810 708 aaKnown RBP17.44■□□□□ 0.38
CLN6-215ENST00000636674 MAP7D2Q96T17 732 aa17.44■□□□□ 0.38
CLN6-215ENST00000636674 SNRKQ9NRH2 765 aa17.44■□□□□ 0.38
CLN6-215ENST00000636674 SPG7Q9UQ90 795 aa17.44■□□□□ 0.38
CLN6-215ENST00000636674 KIAA2012Q0VF49 1180 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 TEFQ10587 303 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 SASS6Q6UVJ0 657 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 EVI5LQ96CN4 794 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.43■□□□□ 0.38
CLN6-215ENST00000636674 SLIT3O75094 1523 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 BTBD11A6QL63 1104 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 FOXD4L6Q3SYB3 417 aaPredicted RBP17.43■□□□□ 0.38
CLN6-215ENST00000636674 FOXD4L3Q6VB84 417 aaPredicted RBP17.43■□□□□ 0.38
CLN6-215ENST00000636674 CADPS2Q86UW7 1296 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 KCNH5Q8NCM2 988 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 FUCA2Q9BTY2 467 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 MRC1P22897 1456 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 PXDNQ92626 1479 aa17.43■□□□□ 0.38
CLN6-215ENST00000636674 UTYO14607 1347 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 KCNQ3O43525 872 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 LARGE1O95461 756 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 PTMAP06454 111 aaKnown RBP17.42■□□□□ 0.38
CLN6-215ENST00000636674 OS9Q13438 667 aaPredicted RBP17.42■□□□□ 0.38
CLN6-215ENST00000636674 NECTIN1Q15223 517 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 AMOTQ4VCS5 1084 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 MTMR6Q9Y217 621 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 CCDC171Q6TFL3 1326 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 UQCRHLA0A096LP55 91 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 HIP1O00291 1037 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 DYNC1I1O14576 645 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 UQCRHP07919 91 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 PTH1RQ03431 593 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 PLEKHO1Q53GL0 409 aaPredicted RBP17.42■□□□□ 0.38
CLN6-215ENST00000636674 KSR2Q6VAB6 950 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 PDRG1Q9NUG6 133 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 CYP46A1Q9Y6A2 500 aa17.42■□□□□ 0.38
CLN6-215ENST00000636674 ATF3P18847 181 aa17.41■□□□□ 0.38
CLN6-215ENST00000636674 HSPA1LP34931 641 aa17.41■□□□□ 0.38
CLN6-215ENST00000636674 ZNF530Q6P9A1 599 aaPredicted RBP17.41■□□□□ 0.38
CLN6-215ENST00000636674 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
CLN6-215ENST00000636674 GJB2P29033 226 aa17.4■□□□□ 0.38
CLN6-215ENST00000636674 SLAIN2Q9P270 581 aa17.4■□□□□ 0.38
CLN6-215ENST00000636674 MAP3K2Q9Y2U5 619 aa17.4■□□□□ 0.38
CLN6-215ENST00000636674 JCADQ9P266 1359 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms