RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	ARFGEF2	Q9Y6D5	1785 aa		13.66	□□□□□ -0.22
SPTAN1-231	ENST00000636337	TRAF5	O00463	557 aa		13.65	□□□□□ -0.22
SPTAN1-231	ENST00000636337	CYP19A1	P11511	503 aa	Predicted RBP	13.65	□□□□□ -0.22
SPTAN1-231	ENST00000636337	BRPF1	P55201	1214 aa	Predicted RBP	13.65	□□□□□ -0.22
SPTAN1-231	ENST00000636337	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.65	□□□□□ -0.22
SPTAN1-231	ENST00000636337	PRR5L	Q6MZQ0	368 aa		13.65	□□□□□ -0.22
SPTAN1-231	ENST00000636337	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.65	□□□□□ -0.22
SPTAN1-231	ENST00000636337	EIF4A2	Q14240	407 aa	Known RBP	13.64	□□□□□ -0.23
SPTAN1-231	ENST00000636337	TBC1D9B	Q66K14	1250 aa		13.64	□□□□□ -0.23
SPTAN1-231	ENST00000636337	STYK1	Q6J9G0	422 aa		13.64	□□□□□ -0.23
SPTAN1-231	ENST00000636337	CCDC93	Q567U6	631 aa		13.63	□□□□□ -0.23
SPTAN1-231	ENST00000636337	C1orf141	Q5JVX7	400 aa		13.63	□□□□□ -0.23
SPTAN1-231	ENST00000636337	CIAPIN1	Q6FI81	312 aa		13.63	□□□□□ -0.23
SPTAN1-231	ENST00000636337	GPC2	Q8N158	579 aa		13.63	□□□□□ -0.23
SPTAN1-231	ENST00000636337	SRGN	P10124	158 aa		13.62	□□□□□ -0.23
SPTAN1-231	ENST00000636337	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
SPTAN1-231	ENST00000636337	MASTL	Q96GX5	879 aa		13.62	□□□□□ -0.23
SPTAN1-231	ENST00000636337	FZD9	O00144	591 aa		13.61	□□□□□ -0.23
SPTAN1-231	ENST00000636337	NPHP1	O15259	732 aa		13.61	□□□□□ -0.23
SPTAN1-231	ENST00000636337	CANX	P27824	592 aa	Known RBP	13.61	□□□□□ -0.23
SPTAN1-231	ENST00000636337	AMOT	Q4VCS5	1084 aa		13.61	□□□□□ -0.23
SPTAN1-231	ENST00000636337	SAPCD2	Q86UD0	394 aa		13.61	□□□□□ -0.23
SPTAN1-231	ENST00000636337	C7orf43	Q8WVR3	580 aa		13.61	□□□□□ -0.23
SPTAN1-231	ENST00000636337	GCC1	Q96CN9	775 aa		13.61	□□□□□ -0.23
SPTAN1-231	ENST00000636337	LMOD1	P29536	600 aa	Predicted RBP	13.6	□□□□□ -0.23
SPTAN1-231	ENST00000636337	CNBD1	Q8NA66	436 aa		13.6	□□□□□ -0.23
SPTAN1-231	ENST00000636337	POLK	Q9UBT6	870 aa		13.6	□□□□□ -0.23
SPTAN1-231	ENST00000636337	GJA3	Q9Y6H8	435 aa		13.6	□□□□□ -0.23
SPTAN1-231	ENST00000636337	SCN7A	Q01118	1682 aa		13.59	□□□□□ -0.23
SPTAN1-231	ENST00000636337	SCN11A	Q9UI33	1791 aa		13.59	□□□□□ -0.23
SPTAN1-231	ENST00000636337	IARS	P41252	1262 aa	Known RBP	13.59	□□□□□ -0.23
SPTAN1-231	ENST00000636337	OLFM4	Q6UX06	510 aa		13.59	□□□□□ -0.23
SPTAN1-231	ENST00000636337	NBPF15	Q8N660	670 aa		13.59	□□□□□ -0.23
SPTAN1-231	ENST00000636337	SLC24A1	O60721	1099 aa		13.58	□□□□□ -0.24
SPTAN1-231	ENST00000636337	CELF2	O95319	508 aa	Known RBP	13.58	□□□□□ -0.24
SPTAN1-231	ENST00000636337	EPS15	P42566	896 aa		13.58	□□□□□ -0.24
SPTAN1-231	ENST00000636337	ST5	P78524	1137 aa		13.58	□□□□□ -0.24
SPTAN1-231	ENST00000636337	SLC39A6	Q13433	755 aa		13.58	□□□□□ -0.24
SPTAN1-231	ENST00000636337	HABP4	Q5JVS0	413 aa	Known RBP	13.58	□□□□□ -0.24
SPTAN1-231	ENST00000636337	CARD14	Q9BXL6	1004 aa		13.58	□□□□□ -0.24
SPTAN1-231	ENST00000636337		A0A087WZG4	1122 aa		13.57	□□□□□ -0.24
SPTAN1-231	ENST00000636337	SCNN1D	P51172	638 aa		13.57	□□□□□ -0.24
SPTAN1-231	ENST00000636337	EIF5	P55010	431 aa	Known RBP	13.57	□□□□□ -0.24
SPTAN1-231	ENST00000636337	RTKN2	Q8IZC4	609 aa		13.57	□□□□□ -0.24
SPTAN1-231	ENST00000636337	HHIPL1	Q96JK4	782 aa		13.57	□□□□□ -0.24
SPTAN1-231	ENST00000636337	ZIC5	Q96T25	663 aa		13.57	□□□□□ -0.24
SPTAN1-231	ENST00000636337	BCOR	Q6W2J9	1755 aa		13.57	□□□□□ -0.24
SPTAN1-231	ENST00000636337	USP50	Q70EL3	339 aa	Predicted RBP	13.56	□□□□□ -0.24
SPTAN1-231	ENST00000636337	JDP2	Q8WYK2	163 aa		13.56	□□□□□ -0.24
SPTAN1-231	ENST00000636337	SETDB2	Q96T68	719 aa		13.56	□□□□□ -0.24
SPTAN1-231	ENST00000636337	SLC52A2	Q9HAB3	445 aa		13.56	□□□□□ -0.24
SPTAN1-231	ENST00000636337	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.56	□□□□□ -0.24
SPTAN1-231	ENST00000636337	TNNT2	P45379	298 aa	Predicted RBP	13.55	□□□□□ -0.24
SPTAN1-231	ENST00000636337	EIF6	P56537	245 aa	Known RBP	13.55	□□□□□ -0.24
SPTAN1-231	ENST00000636337	NOG	Q13253	232 aa		13.55	□□□□□ -0.24
SPTAN1-231	ENST00000636337	AEBP1	Q8IUX7	1158 aa		13.55	□□□□□ -0.24
SPTAN1-231	ENST00000636337	SYNE4	Q8N205	404 aa		13.55	□□□□□ -0.24
SPTAN1-231	ENST00000636337	ZNF408	Q9H9D4	720 aa		13.55	□□□□□ -0.24
SPTAN1-231	ENST00000636337	TBC1D2B	Q9UPU7	963 aa		13.55	□□□□□ -0.24
SPTAN1-231	ENST00000636337	NPR1	P16066	1061 aa		13.54	□□□□□ -0.24
SPTAN1-231	ENST00000636337	COL4A5	P29400	1685 aa		13.53	□□□□□ -0.24
SPTAN1-231	ENST00000636337	VSIG10	Q8N0Z9	540 aa		13.53	□□□□□ -0.24
SPTAN1-231	ENST00000636337	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.53	□□□□□ -0.24
SPTAN1-231	ENST00000636337	STARD3NL	O95772	234 aa		13.52	□□□□□ -0.25
SPTAN1-231	ENST00000636337	CTU1	Q7Z7A3	348 aa	Known RBP	13.52	□□□□□ -0.25
SPTAN1-231	ENST00000636337	LGR6	Q9HBX8	967 aa		13.52	□□□□□ -0.25
SPTAN1-231	ENST00000636337	SAGE1	Q9NXZ1	904 aa		13.52	□□□□□ -0.25
SPTAN1-231	ENST00000636337	MRC1	P22897	1456 aa		13.52	□□□□□ -0.25
SPTAN1-231	ENST00000636337	MKI67	P46013	3256 aa	Known RBP	13.51	□□□□□ -0.25
SPTAN1-231	ENST00000636337	HPS5	Q9UPZ3	1129 aa		13.51	□□□□□ -0.25
SPTAN1-231	ENST00000636337	TRPA1	O75762	1119 aa		13.5	□□□□□ -0.25
SPTAN1-231	ENST00000636337	AKAP4	Q5JQC9	854 aa		13.5	□□□□□ -0.25
SPTAN1-231	ENST00000636337	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.5	□□□□□ -0.25
SPTAN1-231	ENST00000636337	PSMD1	Q99460	953 aa		13.5	□□□□□ -0.25
SPTAN1-231	ENST00000636337	UBR2	Q8IWV8	1755 aa		13.5	□□□□□ -0.25
SPTAN1-231	ENST00000636337	CAMTA2	O94983	1202 aa		13.49	□□□□□ -0.25
SPTAN1-231	ENST00000636337	FXR1	P51114	621 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
SPTAN1-231	ENST00000636337	HUNK	P57058	714 aa		13.49	□□□□□ -0.25
SPTAN1-231	ENST00000636337	ADARB2	Q9NS39	739 aa	Known RBP	13.49	□□□□□ -0.25
SPTAN1-231	ENST00000636337	RNF186	Q9NXI6	227 aa		13.49	□□□□□ -0.25
SPTAN1-231	ENST00000636337	SNED1	Q8TER0	1413 aa		13.48	□□□□□ -0.25
SPTAN1-231	ENST00000636337	KLRG2	A4D1S0	409 aa	Predicted RBP	13.48	□□□□□ -0.25
SPTAN1-231	ENST00000636337	SULT6B1	Q6IMI4	303 aa		13.48	□□□□□ -0.25
SPTAN1-231	ENST00000636337	GPRC5D	Q9NZD1	345 aa		13.48	□□□□□ -0.25
SPTAN1-231	ENST00000636337	AKAP11	Q9UKA4	1901 aa		13.47	□□□□□ -0.25
SPTAN1-231	ENST00000636337	FAM155A	B1AL88	458 aa	Predicted RBP	13.47	□□□□□ -0.25
SPTAN1-231	ENST00000636337	RNMT	O43148	476 aa	Known RBP	13.47	□□□□□ -0.25
SPTAN1-231	ENST00000636337	IL6ST	P40189	918 aa	Predicted RBP	13.47	□□□□□ -0.25
SPTAN1-231	ENST00000636337	CDCA8	Q53HL2	280 aa		13.47	□□□□□ -0.25
SPTAN1-231	ENST00000636337	NPM2	Q86SE8	214 aa	Known RBP	13.47	□□□□□ -0.25
SPTAN1-231	ENST00000636337	LARGE2	Q8N3Y3	721 aa		13.47	□□□□□ -0.25
SPTAN1-231	ENST00000636337	ALDH1B1	P30837	517 aa		13.46	□□□□□ -0.25
SPTAN1-231	ENST00000636337	KIF23	Q02241	960 aa	Predicted RBP	13.46	□□□□□ -0.25
SPTAN1-231	ENST00000636337	DLL1	O00548	723 aa		13.45	□□□□□ -0.26
SPTAN1-231	ENST00000636337	RGMB	Q6NW40	437 aa		13.45	□□□□□ -0.26
SPTAN1-231	ENST00000636337	TTC5	Q8N0Z6	440 aa		13.45	□□□□□ -0.26
SPTAN1-231	ENST00000636337	PGAP2	Q9UHJ9	254 aa		13.45	□□□□□ -0.26
SPTAN1-231	ENST00000636337	CDC37L1	Q7L3B6	337 aa		13.44	□□□□□ -0.26
SPTAN1-231	ENST00000636337	DZIP3	Q86Y13	1208 aa	Known RBP	13.44	□□□□□ -0.26
SPTAN1-231	ENST00000636337	NIM1K	Q8IY84	436 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms