RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 DZIP3Q86Y13 1208 aaKnown RBP10.66□□□□□ -0.7
MECP2-220ENST00000631210 PLBD2Q8NHP8 589 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 CHMP4AQ9BY43 222 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 STK32BQ9NY57 414 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 NARFQ9UHQ1 456 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 N4BP2Q86UW6 1770 aaPredicted RBP10.66□□□□□ -0.7
MECP2-220ENST00000631210 COL24A1Q17RW2 1714 aa10.66□□□□□ -0.7
MECP2-220ENST00000631210 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 ABCC4O15439 1325 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 PTPRCP08575 1304 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 PI4KAP2A4QPH2 592 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 ERVV-1B6SEH8 477 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 GYS1P13807 737 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 TRAPPC3LQ5T215 181 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 C20orf194Q5TEA3 1177 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 KSR2Q6VAB6 950 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 ANKRD13DQ6ZTN6 518 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 PI4KAP1Q8N8J0 262 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 ARHGAP45Q92619 1136 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 TFCP2L1Q9NZI6 479 aa10.65□□□□□ -0.7
MECP2-220ENST00000631210 KIF16BQ96L93 1317 aa10.64□□□□□ -0.71
MECP2-220ENST00000631210 RGL2O15211 777 aa10.64□□□□□ -0.71
MECP2-220ENST00000631210 IGKV5-2P06315 115 aa10.64□□□□□ -0.71
MECP2-220ENST00000631210 HMGB2P26583 209 aaKnown RBP10.64□□□□□ -0.71
MECP2-220ENST00000631210 RRP1P56182 461 aaKnown RBP10.64□□□□□ -0.71
MECP2-220ENST00000631210 USPL1Q5W0Q7 1092 aa10.64□□□□□ -0.71
MECP2-220ENST00000631210 ATF7IPQ6VMQ6 1270 aa10.64□□□□□ -0.71
MECP2-220ENST00000631210 GIGYF2Q6Y7W6 1299 aaKnown RBP10.64□□□□□ -0.71
MECP2-220ENST00000631210 ISCA1Q9BUE6 129 aa10.64□□□□□ -0.71
MECP2-220ENST00000631210 ZBTB3Q9H5J0 574 aa10.64□□□□□ -0.71
MECP2-220ENST00000631210 MAP3K2Q9Y2U5 619 aa10.64□□□□□ -0.71
MECP2-220ENST00000631210 ZNF330Q9Y3S2 320 aaPredicted RBP10.64□□□□□ -0.71
MECP2-220ENST00000631210 UBN2Q6ZU65 1347 aa10.63□□□□□ -0.71
MECP2-220ENST00000631210 A0A087WZG4 1122 aa10.63□□□□□ -0.71
MECP2-220ENST00000631210 FKBP5Q13451 457 aaPredicted RBP10.63□□□□□ -0.71
MECP2-220ENST00000631210 FKBP8Q14318 412 aa10.63□□□□□ -0.71
MECP2-220ENST00000631210 BEND3Q5T5X7 828 aa10.63□□□□□ -0.71
MECP2-220ENST00000631210 ZKSCAN2Q63HK3 967 aa10.63□□□□□ -0.71
MECP2-220ENST00000631210 ZNF34Q8IZ26 560 aa10.63□□□□□ -0.71
MECP2-220ENST00000631210 DNAAF4Q8WXU2 420 aa10.63□□□□□ -0.71
MECP2-220ENST00000631210 FRAT1Q92837 279 aaPredicted RBP10.63□□□□□ -0.71
MECP2-220ENST00000631210 METTL22Q9BUU2 404 aaPredicted RBP10.63□□□□□ -0.71
MECP2-220ENST00000631210 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
MECP2-220ENST00000631210 ATP10DQ9P241 1426 aa10.63□□□□□ -0.71
MECP2-220ENST00000631210 PXDNLA1KZ92 1463 aa10.62□□□□□ -0.71
MECP2-220ENST00000631210 TM4SF1P30408 202 aa10.62□□□□□ -0.71
MECP2-220ENST00000631210 RFC4P35249 363 aa10.62□□□□□ -0.71
MECP2-220ENST00000631210 TCIRG1Q13488 830 aa10.62□□□□□ -0.71
MECP2-220ENST00000631210 R3HDM1Q15032 1099 aaKnown RBP10.62□□□□□ -0.71
MECP2-220ENST00000631210 TBC1D9BQ66K14 1250 aa10.62□□□□□ -0.71
MECP2-220ENST00000631210 FLAD1Q8NFF5 587 aa10.62□□□□□ -0.71
MECP2-220ENST00000631210 API5Q9BZZ5 524 aaKnown RBP10.62□□□□□ -0.71
MECP2-220ENST00000631210 IBTKQ9P2D0 1353 aaPredicted RBP10.62□□□□□ -0.71
MECP2-220ENST00000631210 PSDA5PKW4 1024 aaPredicted RBP10.61□□□□□ -0.71
MECP2-220ENST00000631210 DDR1Q08345 913 aa10.61□□□□□ -0.71
MECP2-220ENST00000631210 TRIM28Q13263 835 aaKnown RBP10.61□□□□□ -0.71
MECP2-220ENST00000631210 NFIXQ14938 502 aa10.61□□□□□ -0.71
MECP2-220ENST00000631210 CWF19L2Q2TBE0 894 aaKnown RBP10.61□□□□□ -0.71
MECP2-220ENST00000631210 INTS3Q68E01 1043 aaKnown RBP10.61□□□□□ -0.71
MECP2-220ENST00000631210 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
MECP2-220ENST00000631210 KIF6Q6ZMV9 814 aa10.61□□□□□ -0.71
MECP2-220ENST00000631210 RIC3Q7Z5B4 369 aa10.61□□□□□ -0.71
MECP2-220ENST00000631210 PANK1Q8TE04 598 aa10.61□□□□□ -0.71
MECP2-220ENST00000631210 CLUAP1Q96AJ1 413 aa10.61□□□□□ -0.71
MECP2-220ENST00000631210 NRXN2Q9P2S2 1712 aa10.61□□□□□ -0.71
MECP2-220ENST00000631210 NEURL1BA8MQ27 555 aa10.6□□□□□ -0.71
MECP2-220ENST00000631210 ATP5J2-PTCD1G3V325 749 aa10.6□□□□□ -0.71
MECP2-220ENST00000631210 IPO8O15397 1037 aaKnown RBP10.6□□□□□ -0.71
MECP2-220ENST00000631210 DDX58O95786 925 aaKnown RBP10.6□□□□□ -0.71
MECP2-220ENST00000631210 CASP7P55210 303 aa10.6□□□□□ -0.71
MECP2-220ENST00000631210 PDE3AQ14432 1141 aa10.6□□□□□ -0.71
MECP2-220ENST00000631210 NLRP10Q86W26 655 aa10.6□□□□□ -0.71
MECP2-220ENST00000631210 TMEM57Q8N5G2 664 aa10.6□□□□□ -0.71
MECP2-220ENST00000631210 MYD88Q99836 296 aa10.6□□□□□ -0.71
MECP2-220ENST00000631210 SGIP1Q9BQI5 828 aa10.6□□□□□ -0.71
MECP2-220ENST00000631210 AFDNP55196 1824 aaKnown RBP10.6□□□□□ -0.71
MECP2-220ENST00000631210 ZPR1O75312 459 aa10.59□□□□□ -0.71
MECP2-220ENST00000631210 CENPBP07199 599 aaPredicted RBP10.59□□□□□ -0.71
MECP2-220ENST00000631210 GPTP24298 496 aa10.59□□□□□ -0.71
MECP2-220ENST00000631210 SUSD4Q5VX71 490 aa10.59□□□□□ -0.71
MECP2-220ENST00000631210 DZIP1LQ8IYY4 767 aaKnown RBP10.59□□□□□ -0.71
MECP2-220ENST00000631210 SYNE4Q8N205 404 aa10.59□□□□□ -0.71
MECP2-220ENST00000631210 LINS1Q8NG48 757 aa10.59□□□□□ -0.71
MECP2-220ENST00000631210 UTYO14607 1347 aa10.58□□□□□ -0.71
MECP2-220ENST00000631210 POLRMTO00411 1230 aaKnown RBP10.58□□□□□ -0.72
MECP2-220ENST00000631210 ALDH1L1O75891 902 aa10.58□□□□□ -0.72
MECP2-220ENST00000631210 NTSR2O95665 410 aa10.58□□□□□ -0.72
MECP2-220ENST00000631210 MSL1Q68DK7 614 aa10.58□□□□□ -0.72
MECP2-220ENST00000631210 SLC16A10Q8TF71 515 aa10.58□□□□□ -0.72
MECP2-220ENST00000631210 ARXQ96QS3 562 aa10.58□□□□□ -0.72
MECP2-220ENST00000631210 USP44Q9H0E7 712 aa10.58□□□□□ -0.72
MECP2-220ENST00000631210 H7C1W4 665 aa10.57□□□□□ -0.72
MECP2-220ENST00000631210 ZBTB7BO15156 539 aaPredicted RBP10.57□□□□□ -0.72
MECP2-220ENST00000631210 PTGER2P43116 358 aa10.57□□□□□ -0.72
MECP2-220ENST00000631210 GCKRQ14397 625 aa10.57□□□□□ -0.72
MECP2-220ENST00000631210 HSP90AB3PQ58FF7 597 aa10.57□□□□□ -0.72
MECP2-220ENST00000631210 SLC4A10Q6U841 1118 aa10.57□□□□□ -0.72
MECP2-220ENST00000631210 NLGN1Q8N2Q7 840 aa10.57□□□□□ -0.72
MECP2-220ENST00000631210 CCDC191Q8NCU4 936 aa10.57□□□□□ -0.72
MECP2-220ENST00000631210 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms