RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
CHD2-218ENST00000629346 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
CHD2-218ENST00000629346 FMR1Q06787 632 aaKnown RBP eCLIP16.4■□□□□ 0.22
CHD2-218ENST00000629346 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
CHD2-218ENST00000629346 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
CHD2-218ENST00000629346 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
CHD2-218ENST00000629346 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
CHD2-218ENST00000629346 ECE1P42892 770 aa16.39■□□□□ 0.21
CHD2-218ENST00000629346 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
CHD2-218ENST00000629346 CACNA1SQ13698 1873 aa16.39■□□□□ 0.21
CHD2-218ENST00000629346 A0A087WZG4 1122 aa16.38■□□□□ 0.21
CHD2-218ENST00000629346 SRGNP10124 158 aa16.38■□□□□ 0.21
CHD2-218ENST00000629346 EIF5P55010 431 aaKnown RBP16.38■□□□□ 0.21
CHD2-218ENST00000629346 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
CHD2-218ENST00000629346 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
CHD2-218ENST00000629346 MASTLQ96GX5 879 aa16.38■□□□□ 0.21
CHD2-218ENST00000629346 ADAMTSL1Q8N6G6 1762 aa16.37■□□□□ 0.21
CHD2-218ENST00000629346 SCN11AQ9UI33 1791 aa16.37■□□□□ 0.21
CHD2-218ENST00000629346 AOC2O75106 756 aa16.37■□□□□ 0.21
CHD2-218ENST00000629346 CCDC93Q567U6 631 aa16.37■□□□□ 0.21
CHD2-218ENST00000629346 ST5P78524 1137 aa16.36■□□□□ 0.21
CHD2-218ENST00000629346 FKBP4Q02790 459 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHD2-218ENST00000629346 AKAP4Q5JQC9 854 aa16.36■□□□□ 0.21
CHD2-218ENST00000629346 OLFM4Q6UX06 510 aa16.36■□□□□ 0.21
CHD2-218ENST00000629346 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
CHD2-218ENST00000629346 POLR3GLQ9BT43 218 aa16.36■□□□□ 0.21
CHD2-218ENST00000629346 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
CHD2-218ENST00000629346 STARD3NLO95772 234 aa16.35■□□□□ 0.21
CHD2-218ENST00000629346 DGKZQ13574 1117 aa16.35■□□□□ 0.21
CHD2-218ENST00000629346 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
CHD2-218ENST00000629346 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
CHD2-218ENST00000629346 TRAF5O00463 557 aa16.33■□□□□ 0.2
CHD2-218ENST00000629346 CST9Q5W186 159 aa16.33■□□□□ 0.2
CHD2-218ENST00000629346 GJA3Q9Y6H8 435 aa16.33■□□□□ 0.2
CHD2-218ENST00000629346 FZD9O00144 591 aa16.32■□□□□ 0.2
CHD2-218ENST00000629346 GPC2Q8N158 579 aa16.32■□□□□ 0.2
CHD2-218ENST00000629346 THSD7BQ9C0I4 1608 aa16.32■□□□□ 0.2
CHD2-218ENST00000629346 PDE4DIPQ5VU43 2346 aa16.31■□□□□ 0.2
CHD2-218ENST00000629346 LMOD1P29536 600 aaPredicted RBP16.31■□□□□ 0.2
CHD2-218ENST00000629346 MAP2K2P36507 400 aa16.31■□□□□ 0.2
CHD2-218ENST00000629346 IARSP41252 1262 aaKnown RBP16.31■□□□□ 0.2
CHD2-218ENST00000629346 TTC5Q8N0Z6 440 aa16.31■□□□□ 0.2
CHD2-218ENST00000629346 SYNE4Q8N205 404 aa16.31■□□□□ 0.2
CHD2-218ENST00000629346 TLL2Q9Y6L7 1015 aa16.31■□□□□ 0.2
CHD2-218ENST00000629346 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
CHD2-218ENST00000629346 NPR1P16066 1061 aa16.3■□□□□ 0.2
CHD2-218ENST00000629346 NPM2Q86SE8 214 aaKnown RBP16.3■□□□□ 0.2
CHD2-218ENST00000629346 RTKN2Q8IZC4 609 aa16.3■□□□□ 0.2
CHD2-218ENST00000629346 LTBP1Q14766 1721 aa16.3■□□□□ 0.2
CHD2-218ENST00000629346 ARFGEF2Q9Y6D5 1785 aa16.29■□□□□ 0.2
CHD2-218ENST00000629346 CA12O43570 354 aa16.29■□□□□ 0.2
CHD2-218ENST00000629346 EPS15P42566 896 aa16.29■□□□□ 0.2
CHD2-218ENST00000629346 SOX10P56693 466 aa16.29■□□□□ 0.2
CHD2-218ENST00000629346 NBPF5PQ86XG9 351 aaPredicted RBP16.29■□□□□ 0.2
CHD2-218ENST00000629346 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
CHD2-218ENST00000629346 SCN7AQ01118 1682 aa16.29■□□□□ 0.2
CHD2-218ENST00000629346 CAMTA2O94983 1202 aa16.28■□□□□ 0.2
CHD2-218ENST00000629346 A1BGP04217 495 aa16.28■□□□□ 0.2
CHD2-218ENST00000629346 IL6STP40189 918 aaPredicted RBP16.28■□□□□ 0.2
CHD2-218ENST00000629346 EIF6P56537 245 aaKnown RBP16.28■□□□□ 0.2
CHD2-218ENST00000629346 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
CHD2-218ENST00000629346 MRC1P22897 1456 aa16.28■□□□□ 0.2
CHD2-218ENST00000629346 IL13P35225 146 aa16.27■□□□□ 0.2
CHD2-218ENST00000629346 HMOX1P09601 288 aa16.26■□□□□ 0.19
CHD2-218ENST00000629346 CIAPIN1Q6FI81 312 aa16.26■□□□□ 0.19
CHD2-218ENST00000629346 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
CHD2-218ENST00000629346 FAM177BA6PVY3 158 aa16.25■□□□□ 0.19
CHD2-218ENST00000629346 CELF2O95319 508 aaKnown RBP16.25■□□□□ 0.19
CHD2-218ENST00000629346 SCNN1DP51172 638 aa16.25■□□□□ 0.19
CHD2-218ENST00000629346 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
CHD2-218ENST00000629346 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
CHD2-218ENST00000629346 SAPCD2Q86UD0 394 aa16.25■□□□□ 0.19
CHD2-218ENST00000629346 DZIP3Q86Y13 1208 aaKnown RBP16.25■□□□□ 0.19
CHD2-218ENST00000629346 TEX13AQ9BXU3 409 aaPredicted RBP16.25■□□□□ 0.19
CHD2-218ENST00000629346 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
CHD2-218ENST00000629346 PRPF38BQ5VTL8 546 aaKnown RBP16.24■□□□□ 0.19
CHD2-218ENST00000629346 USP50Q70EL3 339 aaPredicted RBP16.24■□□□□ 0.19
CHD2-218ENST00000629346 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
CHD2-218ENST00000629346 UBR2Q8IWV8 1755 aa16.23■□□□□ 0.19
CHD2-218ENST00000629346 ZNF408Q9H9D4 720 aa16.23■□□□□ 0.19
CHD2-218ENST00000629346 TRPM7Q96QT4 1865 aa16.22■□□□□ 0.19
CHD2-218ENST00000629346 KLRG2A4D1S0 409 aaPredicted RBP16.22■□□□□ 0.19
CHD2-218ENST00000629346 ALDH1B1P30837 517 aa16.22■□□□□ 0.19
CHD2-218ENST00000629346 ZNF790Q6PG37 636 aa16.22■□□□□ 0.19
CHD2-218ENST00000629346 TPTE2Q6XPS3 522 aa16.22■□□□□ 0.19
CHD2-218ENST00000629346 ZIC5Q96T25 663 aa16.22■□□□□ 0.19
CHD2-218ENST00000629346 PANK3Q9H999 370 aa16.22■□□□□ 0.19
CHD2-218ENST00000629346 PSMD1Q99460 953 aa16.21■□□□□ 0.19
CHD2-218ENST00000629346 GLIS2Q9BZE0 524 aaPredicted RBP16.21■□□□□ 0.19
CHD2-218ENST00000629346 COL4A5P29400 1685 aa16.21■□□□□ 0.18
CHD2-218ENST00000629346 TEFQ10587 303 aa16.2■□□□□ 0.18
CHD2-218ENST00000629346 LARGE2Q8N3Y3 721 aa16.2■□□□□ 0.18
CHD2-218ENST00000629346 GTF2E1P29083 439 aaPredicted RBP16.19■□□□□ 0.18
CHD2-218ENST00000629346 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
CHD2-218ENST00000629346 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
CHD2-218ENST00000629346 ZNF652Q9Y2D9 606 aa16.19■□□□□ 0.18
CHD2-218ENST00000629346 CLEC4GQ6UXB4 293 aa16.18■□□□□ 0.18
CHD2-218ENST00000629346 HHIPL1Q96JK4 782 aa16.18■□□□□ 0.18
CHD2-218ENST00000629346 ADARB2Q9NS39 739 aaKnown RBP16.18■□□□□ 0.18
CHD2-218ENST00000629346 TCERG1O14776 1098 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms