RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 SOX12O15370 315 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 GPR37L1O60883 481 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SLC10A3P09131 477 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ATP6V1AP38606 617 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 EPS15P42566 896 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ARHGEF25Q86VW2 580 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 LINC00116Q8NCU8 138 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 JDP2Q8WYK2 163 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 NUDT16Q96DE0 195 aaKnown RBP4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ERO1AQ96HE7 468 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ASB2Q96Q27 587 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 GDF15Q99988 308 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 UBE2OQ9C0C9 1292 aaKnown RBP4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 EPHX3Q9H6B9 360 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 EFCC1Q9HA90 598 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ITSN1Q15811 1721 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 KNDC1Q76NI1 1749 aa4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SPTBN5Q9NRC6 3674 aaKnown RBP4.65□□□□□ -1.67
SCARNA4.1-201ENST00000628597 KIAA1551Q9HCM1 1747 aa4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CRYBG1Q9Y4K1 1723 aa4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 LOC102724428A0A0B4J2F2 783 aa4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ECM2O94769 699 aaPredicted RBP4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SIK1P57059 783 aa4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 MRPS5P82675 430 aaKnown RBP4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ARHGEF6Q15052 776 aa4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ZCRB1Q8TBF4 217 aaKnown RBP4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 MYLIPQ8WY64 445 aa4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ADARB2Q9NS39 739 aaKnown RBP4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 PDZRN3Q9UPQ7 1066 aa4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 KIF13BQ9NQT8 1826 aa4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CNTNAP4Q9C0A0 1308 aa4.64□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ANKRD50Q9ULJ7 1429 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 TIAM2Q8IVF5 1701 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 LAMB4A4D0S4 1761 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 RGPD8O14715 1765 aaPredicted RBP4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SLIT3O75094 1523 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 DDR1Q08345 913 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 USP48Q86UV5 1035 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ZC3H15Q8WU90 426 aaKnown RBP4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 UIMC1Q96RL1 719 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 KCNH6Q9H252 994 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SEMA6BQ9H3T3 888 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 U3KPZ7 1027 aaPredicted RBP4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 NUP155O75694 1391 aa4.63□□□□□ -1.67
SCARNA4.1-201ENST00000628597 USP54Q70EL1 1684 aa4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 FZD9O00144 591 aa4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 POLRMTO00411 1230 aaKnown RBP4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ALDH1A1P00352 501 aa4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ATXN8OSP0DMR3 200 aa4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SREBF2Q12772 1141 aa4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 FKBP8Q14318 412 aa4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CNKSR1Q969H4 720 aa4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ZNF277Q9NRM2 450 aaPredicted RBP4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 THEGQ9P2T0 379 aa4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ADGRF5Q8IZF2 1346 aa4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 RANBP2P49792 3224 aaKnown RBP4.62□□□□□ -1.67
SCARNA4.1-201ENST00000628597 EPG5Q9HCE0 2579 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ZNF318Q5VUA4 2279 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 PAPPA2Q9BXP8 1791 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 BRCA1P38398 1863 aaKnown RBP4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 FASNP49327 2511 aaKnown RBP4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 FAM86C2PA6NEL3 165 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 RPS6KA4O75676 772 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 TM4SF4P48230 202 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CCDC93Q567U6 631 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SLC51AQ86UW1 340 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 FBXL18Q96ME1 805 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CCDC61Q9Y6R9 512 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 PTPRZ1P23471 2315 aaPredicted RBP4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 TPRP12270 2363 aaKnown RBP4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 GPR179Q6PRD1 2367 aa4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 MKI67P46013 3256 aaKnown RBP4.61□□□□□ -1.67
SCARNA4.1-201ENST00000628597 LY75O60449 1722 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 C4AP0C0L4 1744 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ADAMTSL1Q8N6G6 1762 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ZBTB22O15209 634 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ZPR1O75312 459 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 FARP2O94887 1054 aaPredicted RBP4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 PDE6BP35913 854 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 IARSP41252 1262 aaKnown RBP4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SCNN1DP51172 638 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 FKBP4Q02790 459 aaKnown RBP eCLIP4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CSPP1Q1MSJ5 1256 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 RASAL3Q86YV0 1011 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 PPM1EQ8WY54 764 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CNTNAP3BQ96NU0 1288 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CDK19Q9BWU1 502 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CFHR5Q9BXR6 569 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CNTNAP3Q9BZ76 1288 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 PGAP2Q9UHJ9 254 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ZMYND8Q9ULU4 1186 aaPredicted RBP4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 CPSF1Q10570 1443 aaKnown RBP4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 C4BP0C0L5 1744 aa4.6□□□□□ -1.67
SCARNA4.1-201ENST00000628597 PLEKHG3A1L390 1219 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 PRR33A8MZF0 331 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 SERPINB2P05120 415 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 TM4SF1P30408 202 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 MAGEA10P43363 369 aaPredicted RBP4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 ID4P47928 161 aa4.59□□□□□ -1.67
SCARNA4.1-201ENST00000628597 DAPK1P53355 1430 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms