RNA–Protein interactions for RNA: ENST00000626422.2

MECP2-215, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-215ENST00000626422 SETDB2Q96T68 719 aa16.88■□□□□ 0.29
MECP2-215ENST00000626422 TAOK3Q9H2K8 898 aa16.88■□□□□ 0.29
MECP2-215ENST00000626422 STYK1Q6J9G0 422 aa16.87■□□□□ 0.29
MECP2-215ENST00000626422 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
MECP2-215ENST00000626422 CNBD1Q8NA66 436 aa16.87■□□□□ 0.29
MECP2-215ENST00000626422 FMNL2Q96PY5 1086 aa16.87■□□□□ 0.29
MECP2-215ENST00000626422 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
MECP2-215ENST00000626422 DZIP3Q86Y13 1208 aaKnown RBP16.86■□□□□ 0.29
MECP2-215ENST00000626422 GAS2L2Q8NHY3 880 aa16.86■□□□□ 0.29
MECP2-215ENST00000626422 C7orf43Q8WVR3 580 aa16.86■□□□□ 0.29
MECP2-215ENST00000626422 CNKSR1Q969H4 720 aa16.86■□□□□ 0.29
MECP2-215ENST00000626422 SCN4AP35499 1836 aa16.86■□□□□ 0.29
MECP2-215ENST00000626422 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
MECP2-215ENST00000626422 OLFM4Q6UX06 510 aa16.85■□□□□ 0.29
MECP2-215ENST00000626422 MASTLQ96GX5 879 aa16.85■□□□□ 0.29
MECP2-215ENST00000626422 CREBZFQ9NS37 354 aa16.85■□□□□ 0.29
MECP2-215ENST00000626422 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
MECP2-215ENST00000626422 ST5P78524 1137 aa16.84■□□□□ 0.29
MECP2-215ENST00000626422 NPHP1O15259 732 aa16.83■□□□□ 0.28
MECP2-215ENST00000626422 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.28
MECP2-215ENST00000626422 PASKQ96RG2 1323 aa16.83■□□□□ 0.28
MECP2-215ENST00000626422 FOXN1O15353 648 aa16.82■□□□□ 0.28
MECP2-215ENST00000626422 TAF1DQ9H5J8 278 aaPredicted RBP16.82■□□□□ 0.28
MECP2-215ENST00000626422 ZNF541Q9H0D2 1346 aa16.81■□□□□ 0.28
MECP2-215ENST00000626422 NBPF26B4DH59 902 aa16.81■□□□□ 0.28
MECP2-215ENST00000626422 ITGBL1O95965 494 aaPredicted RBP16.81■□□□□ 0.28
MECP2-215ENST00000626422 PRKAR2BP31323 418 aa16.81■□□□□ 0.28
MECP2-215ENST00000626422 NBPF10Q6P3W6 841 aaKnown RBP16.81■□□□□ 0.28
MECP2-215ENST00000626422 NBPF5PQ86XG9 351 aaPredicted RBP16.81■□□□□ 0.28
MECP2-215ENST00000626422 NBPF15Q8N660 670 aa16.81■□□□□ 0.28
MECP2-215ENST00000626422 RSPH6AQ9H0K4 717 aa16.81■□□□□ 0.28
MECP2-215ENST00000626422 ADAMTSL1Q8N6G6 1762 aa16.81■□□□□ 0.28
MECP2-215ENST00000626422 CNTNAP1P78357 1384 aa16.8■□□□□ 0.28
MECP2-215ENST00000626422 KLRG2A4D1S0 409 aaPredicted RBP16.8■□□□□ 0.28
MECP2-215ENST00000626422 SOGA3Q5TF21 947 aa16.8■□□□□ 0.28
MECP2-215ENST00000626422 NPM2Q86SE8 214 aaKnown RBP16.8■□□□□ 0.28
MECP2-215ENST00000626422 L3MBTL3Q96JM7 780 aaPredicted RBP16.8■□□□□ 0.28
MECP2-215ENST00000626422 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
MECP2-215ENST00000626422 NPC1L1Q9UHC9 1359 aa16.79■□□□□ 0.28
MECP2-215ENST00000626422 FAM177BA6PVY3 158 aa16.79■□□□□ 0.28
MECP2-215ENST00000626422 CCDC93Q567U6 631 aa16.79■□□□□ 0.28
MECP2-215ENST00000626422 CLEC4GQ6UXB4 293 aa16.79■□□□□ 0.28
MECP2-215ENST00000626422 MCM10Q7L590 875 aa16.79■□□□□ 0.28
MECP2-215ENST00000626422 LDHDQ86WU2 507 aa16.79■□□□□ 0.28
MECP2-215ENST00000626422 NPR1P16066 1061 aa16.78■□□□□ 0.28
MECP2-215ENST00000626422 VEGFBP49765 207 aa16.78■□□□□ 0.28
MECP2-215ENST00000626422 FKBP4Q02790 459 aaKnown RBP eCLIP16.78■□□□□ 0.28
MECP2-215ENST00000626422 DCTN1Q14203 1278 aa16.78■□□□□ 0.28
MECP2-215ENST00000626422 HLFQ16534 295 aa16.78■□□□□ 0.28
MECP2-215ENST00000626422 IQCA1LA6NCM1 817 aa16.77■□□□□ 0.28
MECP2-215ENST00000626422 SNRPA1P09661 255 aaKnown RBP16.77■□□□□ 0.28
MECP2-215ENST00000626422 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.28
MECP2-215ENST00000626422 NIP7Q9Y221 180 aaKnown RBP eCLIP16.77■□□□□ 0.28
MECP2-215ENST00000626422 NUP98P52948 1817 aa16.76■□□□□ 0.27
MECP2-215ENST00000626422 TPTE2Q6XPS3 522 aa16.76■□□□□ 0.27
MECP2-215ENST00000626422 COL4A5P29400 1685 aa16.75■□□□□ 0.27
MECP2-215ENST00000626422 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
MECP2-215ENST00000626422 SYNE4Q8N205 404 aa16.75■□□□□ 0.27
MECP2-215ENST00000626422 HACL1Q9UJ83 578 aa16.75■□□□□ 0.27
MECP2-215ENST00000626422 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
MECP2-215ENST00000626422 RNF123Q5XPI4 1314 aa16.74■□□□□ 0.27
MECP2-215ENST00000626422 LTBP1Q14766 1721 aa16.74■□□□□ 0.27
MECP2-215ENST00000626422 SNED1Q8TER0 1413 aa16.74■□□□□ 0.27
MECP2-215ENST00000626422 EPHX2P34913 555 aa16.74■□□□□ 0.27
MECP2-215ENST00000626422 SLC51AQ86UW1 340 aa16.74■□□□□ 0.27
MECP2-215ENST00000626422 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
MECP2-215ENST00000626422 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
MECP2-215ENST00000626422 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
MECP2-215ENST00000626422 LAMB4A4D0S4 1761 aa16.74■□□□□ 0.27
MECP2-215ENST00000626422 FZD9O00144 591 aa16.73■□□□□ 0.27
MECP2-215ENST00000626422 IARSP41252 1262 aaKnown RBP16.73■□□□□ 0.27
MECP2-215ENST00000626422 MAP1SQ66K74 1059 aaPredicted RBP16.73■□□□□ 0.27
MECP2-215ENST00000626422 RTKN2Q8IZC4 609 aa16.73■□□□□ 0.27
MECP2-215ENST00000626422 PRDM10Q9NQV6 1147 aa16.73■□□□□ 0.27
MECP2-215ENST00000626422 CNTROBQ8N137 903 aa16.72■□□□□ 0.27
MECP2-215ENST00000626422 WBP1LQ9NX94 342 aa16.72■□□□□ 0.27
MECP2-215ENST00000626422 U2AF1L5P0DN76 240 aaPredicted RBP16.71■□□□□ 0.27
MECP2-215ENST00000626422 ALDH1B1P30837 517 aa16.71■□□□□ 0.27
MECP2-215ENST00000626422 LBX1P52954 281 aa16.71■□□□□ 0.27
MECP2-215ENST00000626422 U2AF1Q01081 240 aaKnown RBP eCLIP16.71■□□□□ 0.27
MECP2-215ENST00000626422 FMR1Q06787 632 aaKnown RBP eCLIP16.71■□□□□ 0.27
MECP2-215ENST00000626422 NUTM1Q86Y26 1132 aa16.71■□□□□ 0.27
MECP2-215ENST00000626422 NGEFQ8N5V2 710 aa16.71■□□□□ 0.27
MECP2-215ENST00000626422 RTF1Q92541 710 aaKnown RBP16.71■□□□□ 0.27
MECP2-215ENST00000626422 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
MECP2-215ENST00000626422 ABCC12Q96J65 1359 aa16.71■□□□□ 0.27
MECP2-215ENST00000626422 KDM3BQ7LBC6 1761 aa16.71■□□□□ 0.27
MECP2-215ENST00000626422 CTCFP49711 727 aaPredicted RBP16.7■□□□□ 0.26
MECP2-215ENST00000626422 DEFB115Q30KQ5 88 aa16.7■□□□□ 0.26
MECP2-215ENST00000626422 RASSF10A6NK89 507 aa16.69■□□□□ 0.26
MECP2-215ENST00000626422 RGL2O15211 777 aa16.69■□□□□ 0.26
MECP2-215ENST00000626422 PPP2R1AP30153 589 aa16.69■□□□□ 0.26
MECP2-215ENST00000626422 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
MECP2-215ENST00000626422 CRY2Q49AN0 593 aa16.69■□□□□ 0.26
MECP2-215ENST00000626422 GPC2Q8N158 579 aa16.69■□□□□ 0.26
MECP2-215ENST00000626422 NUDCQ9Y266 331 aa16.69■□□□□ 0.26
MECP2-215ENST00000626422 GTF2E1P29083 439 aaPredicted RBP16.68■□□□□ 0.26
MECP2-215ENST00000626422 TTLL7Q6ZT98 887 aa16.68■□□□□ 0.26
MECP2-215ENST00000626422 PNMA8AQ86V59 439 aaPredicted RBP16.68■□□□□ 0.26
MECP2-215ENST00000626422 AIDAQ96BJ3 306 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms