RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 LINS1Q8NG48 757 aa24.34■■□□□ 1.49
TREX1-205ENST00000625293 LRRCC1Q9C099 1032 aa24.34■■□□□ 1.49
TREX1-205ENST00000625293 UTYO14607 1347 aa24.33■■□□□ 1.49
TREX1-205ENST00000625293 CDC45O75419 566 aa24.33■■□□□ 1.49
TREX1-205ENST00000625293 MARCH10Q8NA82 808 aaPredicted RBP24.33■■□□□ 1.49
TREX1-205ENST00000625293 KCPQ6ZWJ8 1503 aa24.32■■□□□ 1.48
TREX1-205ENST00000625293 EXOC5O00471 708 aa24.32■■□□□ 1.48
TREX1-205ENST00000625293 MTX1Q13505 466 aa24.32■■□□□ 1.48
TREX1-205ENST00000625293 TNS2Q63HR2 1409 aa24.32■■□□□ 1.48
TREX1-205ENST00000625293 RBM25P49756 843 aaKnown RBP24.31■■□□□ 1.48
TREX1-205ENST00000625293 XAGE3Q8WTP9 111 aa24.31■■□□□ 1.48
TREX1-205ENST00000625293 PDE1AP54750 535 aa24.3■■□□□ 1.48
TREX1-205ENST00000625293 AIMP1Q12904 312 aaKnown RBP24.3■■□□□ 1.48
TREX1-205ENST00000625293 CWF19L2Q2TBE0 894 aaKnown RBP24.3■■□□□ 1.48
TREX1-205ENST00000625293 CDCA7Q9BWT1 371 aaPredicted RBP24.3■■□□□ 1.48
TREX1-205ENST00000625293 WNK3Q9BYP7 1800 aa24.3■■□□□ 1.48
TREX1-205ENST00000625293 TOGARAM1Q9Y4F4 1720 aa24.3■■□□□ 1.48
TREX1-205ENST00000625293 MYL6BP14649 208 aa24.29■■□□□ 1.48
TREX1-205ENST00000625293 DAXXQ9UER7 740 aaPredicted RBP24.29■■□□□ 1.48
TREX1-205ENST00000625293 ERBB4Q15303 1308 aa24.29■■□□□ 1.48
TREX1-205ENST00000625293 RAB11FIP3O75154 756 aa24.29■■□□□ 1.48
TREX1-205ENST00000625293 TRIM37O94972 964 aa24.29■■□□□ 1.48
TREX1-205ENST00000625293 IGKV5-2P06315 115 aa24.29■■□□□ 1.48
TREX1-205ENST00000625293 COPS6Q7L5N1 327 aa24.29■■□□□ 1.48
TREX1-205ENST00000625293 DDX54Q8TDD1 881 aaKnown RBP24.29■■□□□ 1.48
TREX1-205ENST00000625293 SRGAP3O43295 1099 aa24.28■■□□□ 1.48
TREX1-205ENST00000625293 SDSP20132 328 aa24.27■■□□□ 1.48
TREX1-205ENST00000625293 BECN1Q14457 450 aa24.27■■□□□ 1.48
TREX1-205ENST00000625293 FAM196AQ6ZSG2 479 aa24.27■■□□□ 1.48
TREX1-205ENST00000625293 PTF1AQ7RTS3 328 aa24.27■■□□□ 1.48
TREX1-205ENST00000625293 RIC3Q7Z5B4 369 aa24.27■■□□□ 1.48
TREX1-205ENST00000625293 DEFB132Q7Z7B7 95 aa24.27■■□□□ 1.48
TREX1-205ENST00000625293 C9orf78Q9NZ63 289 aaPredicted RBP24.27■■□□□ 1.48
TREX1-205ENST00000625293 GRM8O00222 908 aa24.26■■□□□ 1.47
TREX1-205ENST00000625293 METTL22Q9BUU2 404 aaPredicted RBP24.26■■□□□ 1.47
TREX1-205ENST00000625293 HDAC5Q9UQL6 1122 aa24.26■■□□□ 1.47
TREX1-205ENST00000625293 STAP2Q9UGK3 403 aa24.26■■□□□ 1.47
TREX1-205ENST00000625293 KAZALD1Q96I82 304 aa24.24■■□□□ 1.47
TREX1-205ENST00000625293 BCL11AQ9H165 835 aa24.24■■□□□ 1.47
TREX1-205ENST00000625293 NEURL1BA8MQ27 555 aa24.24■■□□□ 1.47
TREX1-205ENST00000625293 SURF6O75683 361 aaKnown RBP24.24■■□□□ 1.47
TREX1-205ENST00000625293 ANKRD13DQ6ZTN6 518 aa24.24■■□□□ 1.47
TREX1-205ENST00000625293 EIF5BO60841 1220 aaKnown RBP24.23■■□□□ 1.47
TREX1-205ENST00000625293 MX1P20591 662 aa24.23■■□□□ 1.47
TREX1-205ENST00000625293 SUCLG2Q96I99 432 aa24.23■■□□□ 1.47
TREX1-205ENST00000625293 TBC1D2Q9BYX2 928 aa24.23■■□□□ 1.47
TREX1-205ENST00000625293 AOX1Q06278 1338 aa24.23■■□□□ 1.47
TREX1-205ENST00000625293 TUBGCP6Q96RT7 1819 aa24.22■■□□□ 1.47
TREX1-205ENST00000625293 NBPF26B4DH59 902 aa24.22■■□□□ 1.47
TREX1-205ENST00000625293 PIP4K2AP48426 406 aaPredicted RBP24.22■■□□□ 1.47
TREX1-205ENST00000625293 NEXNQ0ZGT2 675 aa24.22■■□□□ 1.47
TREX1-205ENST00000625293 NBPF14Q5TI25 921 aa24.22■■□□□ 1.47
TREX1-205ENST00000625293 NBPF10Q6P3W6 841 aaKnown RBP24.22■■□□□ 1.47
TREX1-205ENST00000625293 NBPF15Q8N660 670 aa24.22■■□□□ 1.47
TREX1-205ENST00000625293 RHPN1Q8TCX5 695 aa24.22■■□□□ 1.47
TREX1-205ENST00000625293 GCKRQ14397 625 aa24.21■■□□□ 1.47
TREX1-205ENST00000625293 KIF1BPQ96EK5 621 aa24.21■■□□□ 1.47
TREX1-205ENST00000625293 MYD88Q99836 296 aa24.21■■□□□ 1.47
TREX1-205ENST00000625293 HSP90AB4PQ58FF6 505 aa24.2■■□□□ 1.46
TREX1-205ENST00000625293 CCDC125Q86Z20 511 aa24.2■■□□□ 1.46
TREX1-205ENST00000625293 ACSBG1Q96GR2 724 aa24.2■■□□□ 1.46
TREX1-205ENST00000625293 ARFGEF2Q9Y6D5 1785 aa24.19■■□□□ 1.46
TREX1-205ENST00000625293 KCNQ2O43526 872 aa24.19■■□□□ 1.46
TREX1-205ENST00000625293 KIF2CQ99661 725 aa24.19■■□□□ 1.46
TREX1-205ENST00000625293 PLBD2Q8NHP8 589 aa24.19■■□□□ 1.46
TREX1-205ENST00000625293 IL1RAPL2Q9NP60 686 aa24.19■■□□□ 1.46
TREX1-205ENST00000625293 TMOD3Q9NYL9 352 aa24.19■■□□□ 1.46
TREX1-205ENST00000625293 COL15A1P39059 1388 aa24.18■■□□□ 1.46
TREX1-205ENST00000625293 EN1Q05925 392 aaPredicted RBP24.18■■□□□ 1.46
TREX1-205ENST00000625293 SF3B2Q13435 895 aaKnown RBP24.18■■□□□ 1.46
TREX1-205ENST00000625293 TSHZ3Q63HK5 1081 aa24.18■■□□□ 1.46
TREX1-205ENST00000625293 BICC1Q9H694 974 aaKnown RBP24.18■■□□□ 1.46
TREX1-205ENST00000625293 PTCD1O75127 700 aaKnown RBP24.16■■□□□ 1.46
TREX1-205ENST00000625293 APBA3O96018 575 aa24.16■■□□□ 1.46
TREX1-205ENST00000625293 PIGBQ92521 554 aa24.16■■□□□ 1.46
TREX1-205ENST00000625293 USP42Q9H9J4 1324 aaKnown RBP24.15■■□□□ 1.46
TREX1-205ENST00000625293 CASC1Q6TDU7 716 aa24.15■■□□□ 1.46
TREX1-205ENST00000625293 SNX21Q969T3 373 aa24.14■■□□□ 1.46
TREX1-205ENST00000625293 NUP188Q5SRE5 1749 aa24.14■■□□□ 1.45
TREX1-205ENST00000625293 A1BGP04217 495 aa24.14■■□□□ 1.45
TREX1-205ENST00000625293 NBR1Q14596 966 aa24.14■■□□□ 1.45
TREX1-205ENST00000625293 VSIG10Q8N0Z9 540 aa24.14■■□□□ 1.45
TREX1-205ENST00000625293 NUTM1Q86Y26 1132 aa24.13■■□□□ 1.45
TREX1-205ENST00000625293 PI4K2BQ8TCG2 481 aa24.13■■□□□ 1.45
TREX1-205ENST00000625293 USP26Q9BXU7 913 aa24.13■■□□□ 1.45
TREX1-205ENST00000625293 KAT6BQ8WYB5 2073 aa24.13■■□□□ 1.45
TREX1-205ENST00000625293 EZH2Q15910 746 aaKnown RBP24.12■■□□□ 1.45
TREX1-205ENST00000625293 TTLL7Q6ZT98 887 aa24.12■■□□□ 1.45
TREX1-205ENST00000625293 ERC1Q8IUD2 1116 aa24.12■■□□□ 1.45
TREX1-205ENST00000625293 ATG3Q9NT62 314 aa24.12■■□□□ 1.45
TREX1-205ENST00000625293 PA2G4Q9UQ80 394 aaKnown RBP24.12■■□□□ 1.45
TREX1-205ENST00000625293 BCL9O00512 1426 aa24.12■■□□□ 1.45
TREX1-205ENST00000625293 SBF2Q86WG5 1849 aa24.12■■□□□ 1.45
TREX1-205ENST00000625293 CASP7P55210 303 aa24.11■■□□□ 1.45
TREX1-205ENST00000625293 EPHA10Q5JZY3 1008 aa24.11■■□□□ 1.45
TREX1-205ENST00000625293 ASAP1Q9ULH1 1129 aa24.11■■□□□ 1.45
TREX1-205ENST00000625293 ITGB4P16144 1822 aa24.11■■□□□ 1.45
TREX1-205ENST00000625293 ANTXR1Q9H6X2 564 aa24.11■■□□□ 1.45
TREX1-205ENST00000625293 TNS1Q9HBL0 1735 aaKnown RBP24.1■■□□□ 1.45
TREX1-205ENST00000625293 BAG6P46379 1132 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms