RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 CHL1O00533 1208 aa21.63■■□□□ 1.05
GTF2IP1-210ENST00000622829 AOPEPQ8N6M6 819 aa21.63■■□□□ 1.05
GTF2IP1-210ENST00000622829 MTMR6Q9Y217 621 aa21.63■■□□□ 1.05
GTF2IP1-210ENST00000622829 CACTINQ8WUQ7 758 aaKnown RBP21.63■■□□□ 1.05
GTF2IP1-210ENST00000622829 CHMP4CQ96CF2 233 aa21.63■■□□□ 1.05
GTF2IP1-210ENST00000622829 TOMM22Q9NS69 142 aa21.63■■□□□ 1.05
GTF2IP1-210ENST00000622829 PDCP20941 246 aa21.62■■□□□ 1.05
GTF2IP1-210ENST00000622829 RIC3Q7Z5B4 369 aa21.62■■□□□ 1.05
GTF2IP1-210ENST00000622829 TPM3P06753 285 aa21.62■■□□□ 1.05
GTF2IP1-210ENST00000622829 SYT10Q6XYQ8 523 aa21.62■■□□□ 1.05
GTF2IP1-210ENST00000622829 CERS3Q8IU89 383 aa21.62■■□□□ 1.05
GTF2IP1-210ENST00000622829 CCDC69A6NI79 296 aa21.62■■□□□ 1.05
GTF2IP1-210ENST00000622829 SGSM2O43147 1006 aa21.62■■□□□ 1.05
GTF2IP1-210ENST00000622829 RPGRIP1LQ68CZ1 1315 aa21.62■■□□□ 1.05
GTF2IP1-210ENST00000622829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 SOS1Q07889 1333 aaPredicted RBP21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 GLRX3O76003 335 aaKnown RBP21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 HSPA4P34932 840 aa21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 NMIQ13287 307 aaPredicted RBP21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 ABTB2Q8N961 1025 aa21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 BRPF1P55201 1214 aaPredicted RBP21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 CLEC17AQ6ZS10 378 aa21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 CCAR1Q8IX12 1150 aaKnown RBP21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 CCDC34Q96HJ3 373 aa21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 TPCN1Q9ULQ1 816 aa21.61■■□□□ 1.05
GTF2IP1-210ENST00000622829 KIF18AQ8NI77 898 aa21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 GTPBP4Q9BZE4 634 aaKnown RBP21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 USP44Q9H0E7 712 aa21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 USP27XA6NNY8 438 aa21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 PSMA5P28066 241 aa21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 CUL4AQ13619 759 aa21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 FSIP1Q8NA03 581 aa21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 PES1O00541 588 aaKnown RBP21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 LMOD1P29536 600 aaPredicted RBP21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 ANAPC15P60006 121 aa21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 ZSCAN25Q6NSZ9 544 aa21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 NCOA5Q9HCD5 579 aaKnown RBP21.6■■□□□ 1.05
GTF2IP1-210ENST00000622829 STK38Q15208 465 aa21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 HAND2P61296 217 aa21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 ERCC6LQ2NKX8 1250 aa21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 CYB5RLQ6IPT4 315 aa21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 DDX46Q7L014 1031 aaKnown RBP21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 DNAI1Q9UI46 699 aa21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 SERPINC1P01008 464 aa21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 TEX35Q5T0J7 233 aa21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 SLC52A1Q9NWF4 448 aa21.59■■□□□ 1.05
GTF2IP1-210ENST00000622829 CPLX1O14810 134 aa21.58■■□□□ 1.05
GTF2IP1-210ENST00000622829 NCBP1Q09161 790 aaKnown RBP21.58■■□□□ 1.05
GTF2IP1-210ENST00000622829 GNAT3A8MTJ3 354 aa21.58■■□□□ 1.04
GTF2IP1-210ENST00000622829 KRT222Q8N1A0 295 aa21.58■■□□□ 1.04
GTF2IP1-210ENST00000622829 ZNF853P0CG23 659 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 GOLGA8FQ08AF8 430 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 GOLGA8DPQ0D2H9 430 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 CREB3L3Q68CJ9 461 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 UBXN4Q92575 508 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 ECHDC1Q9NTX5 307 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 ACEP12821 1306 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 CCDC66A2RUB6 948 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 SCAND2PQ9GZW5 306 aaPredicted RBP21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 MRVI1Q9Y6F6 885 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 KCNQ3O43525 872 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 CHGBP05060 677 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 CCDC82Q8N4S0 544 aa21.57■■□□□ 1.04
GTF2IP1-210ENST00000622829 A0A1B0GVL5 298 aa21.56■■□□□ 1.04
GTF2IP1-210ENST00000622829 TULP1O00294 542 aaPredicted RBP21.56■■□□□ 1.04
GTF2IP1-210ENST00000622829 ZNF75DP51815 510 aa21.56■■□□□ 1.04
GTF2IP1-210ENST00000622829 WASHC4Q2M389 1173 aa21.56■■□□□ 1.04
GTF2IP1-210ENST00000622829 RNF216Q9NWF9 866 aaPredicted RBP21.56■■□□□ 1.04
GTF2IP1-210ENST00000622829 DNAAF4Q8WXU2 420 aa21.56■■□□□ 1.04
GTF2IP1-210ENST00000622829 HSP90AB3PQ58FF7 597 aa21.56■■□□□ 1.04
GTF2IP1-210ENST00000622829 EYA1Q99502 592 aa21.56■■□□□ 1.04
GTF2IP1-210ENST00000622829 MAP3K19Q56UN5 1328 aa21.56■■□□□ 1.04
GTF2IP1-210ENST00000622829 APPP05067 770 aa21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 CCDC144BQ3MJ40 725 aa21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 CFAP100Q494V2 611 aa21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 CCDC144CPQ8IYA2 1237 aa21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 ZSCAN31Q96LW9 406 aaPredicted RBP21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 OGFRQ9NZT2 677 aa21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 SNW1Q13573 536 aaKnown RBP21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 COL9A3Q14050 684 aaPredicted RBP21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 RAD50Q92878 1312 aa21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 TPM4P67936 248 aa21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 MAP3K2Q9Y2U5 619 aa21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
GTF2IP1-210ENST00000622829 SFPQP23246 707 aaKnown RBP eCLIP21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 SLFNL1Q499Z3 407 aa21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 ARHGAP29Q52LW3 1261 aa21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 SHROOM2Q13796 1616 aa21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 CPLX3Q8WVH0 158 aa21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 SEC62Q99442 399 aaKnown RBP21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 NOL10Q9BSC4 688 aaKnown RBP21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 EPC1Q9H2F5 836 aa21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 SMTNL1A8MU46 457 aa21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 HSP90AB4PQ58FF6 505 aa21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 DHX37Q8IY37 1157 aaKnown RBP21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 CEP57L1Q8IYX8 460 aa21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 SNRKQ9NRH2 765 aa21.54■■□□□ 1.04
GTF2IP1-210ENST00000622829 SYNE3Q6ZMZ3 975 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms