RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 COPS6Q7L5N1 327 aa23.91■■□□□ 1.42
CIRBP-245ENST00000621399 STK31Q9BXU1 1019 aa23.91■■□□□ 1.42
CIRBP-245ENST00000621399 TCERG1O14776 1098 aaKnown RBP23.9■■□□□ 1.42
CIRBP-245ENST00000621399 XAGE3Q8WTP9 111 aa23.9■■□□□ 1.42
CIRBP-245ENST00000621399 ZNF652Q9Y2D9 606 aa23.89■■□□□ 1.41
CIRBP-245ENST00000621399 MAP3K15Q6ZN16 1313 aa23.88■■□□□ 1.41
CIRBP-245ENST00000621399 BICDL1Q6ZP65 573 aa23.88■■□□□ 1.41
CIRBP-245ENST00000621399 ZBTB3Q9H5J0 574 aa23.88■■□□□ 1.41
CIRBP-245ENST00000621399 ERVV-1B6SEH8 477 aa23.87■■□□□ 1.41
CIRBP-245ENST00000621399 CLEC4GQ6UXB4 293 aa23.87■■□□□ 1.41
CIRBP-245ENST00000621399 PARP3Q9Y6F1 533 aa23.87■■□□□ 1.41
CIRBP-245ENST00000621399 RGL2O15211 777 aa23.86■■□□□ 1.41
CIRBP-245ENST00000621399 SLC4A2P04920 1241 aa23.86■■□□□ 1.41
CIRBP-245ENST00000621399 TM4SF1P30408 202 aa23.86■■□□□ 1.41
CIRBP-245ENST00000621399 NFIXQ14938 502 aa23.86■■□□□ 1.41
CIRBP-245ENST00000621399 HLFQ16534 295 aa23.86■■□□□ 1.41
CIRBP-245ENST00000621399 TBC1D9BQ66K14 1250 aa23.86■■□□□ 1.41
CIRBP-245ENST00000621399 PHAXQ9H814 394 aaKnown RBP23.85■■□□□ 1.41
CIRBP-245ENST00000621399 DDR1Q08345 913 aa23.84■■□□□ 1.41
CIRBP-245ENST00000621399 ANKRD13DQ6ZTN6 518 aa23.83■■□□□ 1.41
CIRBP-245ENST00000621399 SETDB2Q96T68 719 aa23.83■■□□□ 1.41
CIRBP-245ENST00000621399 COL24A1Q17RW2 1714 aa23.83■■□□□ 1.41
CIRBP-245ENST00000621399 POLRMTO00411 1230 aaKnown RBP23.82■■□□□ 1.4
CIRBP-245ENST00000621399 GIGYF2Q6Y7W6 1299 aaKnown RBP23.82■■□□□ 1.4
CIRBP-245ENST00000621399 KLHL34Q8N239 644 aa23.82■■□□□ 1.4
CIRBP-245ENST00000621399 SCN7AQ01118 1682 aa23.82■■□□□ 1.4
CIRBP-245ENST00000621399 PLBD2Q8NHP8 589 aa23.81■■□□□ 1.4
CIRBP-245ENST00000621399 NIP7Q9Y221 180 aaKnown RBP eCLIP23.81■■□□□ 1.4
CIRBP-245ENST00000621399 SERPINB2P05120 415 aa23.8■■□□□ 1.4
CIRBP-245ENST00000621399 DDX58O95786 925 aaKnown RBP23.79■■□□□ 1.4
CIRBP-245ENST00000621399 CT47B1P0C2W7 299 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-245ENST00000621399 G2E3Q7L622 706 aa23.79■■□□□ 1.4
CIRBP-245ENST00000621399 RIC3Q7Z5B4 369 aa23.79■■□□□ 1.4
CIRBP-245ENST00000621399 ZNF428Q96B54 188 aa23.79■■□□□ 1.4
CIRBP-245ENST00000621399 YTHDC1Q96MU7 727 aaKnown RBP23.79■■□□□ 1.4
CIRBP-245ENST00000621399 FHDC1Q9C0D6 1143 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-245ENST00000621399 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
CIRBP-245ENST00000621399 BCORQ6W2J9 1755 aa23.78■■□□□ 1.4
CIRBP-245ENST00000621399 HSP90AB3PQ58FF7 597 aa23.78■■□□□ 1.4
CIRBP-245ENST00000621399 GPTP24298 496 aa23.77■■□□□ 1.4
CIRBP-245ENST00000621399 FLIIQ13045 1269 aa23.77■■□□□ 1.4
CIRBP-245ENST00000621399 ZNF34Q8IZ26 560 aa23.76■■□□□ 1.39
CIRBP-245ENST00000621399 ATP10DQ9P241 1426 aa23.76■■□□□ 1.39
CIRBP-245ENST00000621399 FAM177BA6PVY3 158 aa23.75■■□□□ 1.39
CIRBP-245ENST00000621399 NPHP1O15259 732 aa23.75■■□□□ 1.39
CIRBP-245ENST00000621399 TCIRG1Q13488 830 aa23.75■■□□□ 1.39
CIRBP-245ENST00000621399 KSR2Q6VAB6 950 aa23.75■■□□□ 1.39
CIRBP-245ENST00000621399 NBPF5PQ86XG9 351 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-245ENST00000621399 SSH1Q8WYL5 1049 aa23.75■■□□□ 1.39
CIRBP-245ENST00000621399 CD2APQ9Y5K6 639 aa23.75■■□□□ 1.39
CIRBP-245ENST00000621399 PI4KAP2A4QPH2 592 aa23.74■■□□□ 1.39
CIRBP-245ENST00000621399 FKBP5Q13451 457 aaPredicted RBP23.74■■□□□ 1.39
CIRBP-245ENST00000621399 ALDH1L2Q3SY69 923 aa23.74■■□□□ 1.39
CIRBP-245ENST00000621399 MRPL50Q8N5N7 158 aaKnown RBP23.74■■□□□ 1.39
CIRBP-245ENST00000621399 PI4KAP1Q8N8J0 262 aa23.74■■□□□ 1.39
CIRBP-245ENST00000621399 SYT17Q9BSW7 474 aa23.74■■□□□ 1.39
CIRBP-245ENST00000621399 TPTE2Q6XPS3 522 aa23.73■■□□□ 1.39
CIRBP-245ENST00000621399 CNBD1Q8NA66 436 aa23.73■■□□□ 1.39
CIRBP-245ENST00000621399 BCL2L13Q9BXK5 485 aa23.73■■□□□ 1.39
CIRBP-245ENST00000621399 MAP3K2Q9Y2U5 619 aa23.73■■□□□ 1.39
CIRBP-245ENST00000621399 PARP10Q53GL7 1025 aa23.72■■□□□ 1.39
CIRBP-245ENST00000621399 SMC4Q9NTJ3 1288 aa23.72■■□□□ 1.39
CIRBP-245ENST00000621399 UBN2Q6ZU65 1347 aa23.72■■□□□ 1.39
CIRBP-245ENST00000621399 GTF2E1P29083 439 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-245ENST00000621399 SUSD4Q5VX71 490 aa23.71■■□□□ 1.39
CIRBP-245ENST00000621399 PRR5LQ6MZQ0 368 aa23.71■■□□□ 1.39
CIRBP-245ENST00000621399 MYD88Q99836 296 aa23.71■■□□□ 1.39
CIRBP-245ENST00000621399 C10orf71Q711Q0 1435 aa23.7■■□□□ 1.38
CIRBP-245ENST00000621399 ADCY9O60503 1353 aa23.7■■□□□ 1.38
CIRBP-245ENST00000621399 ATP5J2-PTCD1G3V325 749 aa23.7■■□□□ 1.38
CIRBP-245ENST00000621399 ST5P78524 1137 aa23.7■■□□□ 1.38
CIRBP-245ENST00000621399 PPP1R42Q7Z4L9 355 aa23.7■■□□□ 1.38
CIRBP-245ENST00000621399 CCDC24Q8N4L8 307 aa23.7■■□□□ 1.38
CIRBP-245ENST00000621399 METTL22Q9BUU2 404 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-245ENST00000621399 NYXQ9GZU5 481 aa23.7■■□□□ 1.38
CIRBP-245ENST00000621399 NUP98P52948 1817 aa23.69■■□□□ 1.38
CIRBP-245ENST00000621399 RARSP54136 660 aaKnown RBP23.69■■□□□ 1.38
CIRBP-245ENST00000621399 NLRP10Q86W26 655 aa23.69■■□□□ 1.38
CIRBP-245ENST00000621399 NLGN2Q8NFZ4 835 aa23.69■■□□□ 1.38
CIRBP-245ENST00000621399 ISCA1Q9BUE6 129 aa23.69■■□□□ 1.38
CIRBP-245ENST00000621399 UTP14AQ9BVJ6 771 aaKnown RBP23.68■■□□□ 1.38
CIRBP-245ENST00000621399 TGFB2P61812 414 aa23.67■■□□□ 1.38
CIRBP-245ENST00000621399 NEXNQ0ZGT2 675 aa23.67■■□□□ 1.38
CIRBP-245ENST00000621399 DNAAF4Q8WXU2 420 aa23.67■■□□□ 1.38
CIRBP-245ENST00000621399 TRIM28Q13263 835 aaKnown RBP23.66■■□□□ 1.38
CIRBP-245ENST00000621399 NUTM1Q86Y26 1132 aa23.66■■□□□ 1.38
CIRBP-245ENST00000621399 BRIP1Q9BX63 1249 aa23.66■■□□□ 1.38
CIRBP-245ENST00000621399 IBTKQ9P2D0 1353 aaPredicted RBP23.65■■□□□ 1.38
CIRBP-245ENST00000621399 F6X3S4 739 aa23.65■■□□□ 1.38
CIRBP-245ENST00000621399 NTSR2O95665 410 aa23.65■■□□□ 1.38
CIRBP-245ENST00000621399 ERFEQ4G0M1 354 aa23.65■■□□□ 1.38
CIRBP-245ENST00000621399 TRMT112Q9UI30 125 aaKnown RBP23.65■■□□□ 1.38
CIRBP-245ENST00000621399 PTPRCP08575 1304 aa23.64■■□□□ 1.38
CIRBP-245ENST00000621399 A0A0G2JLW4 131 aa23.64■■□□□ 1.37
CIRBP-245ENST00000621399 PDE6BP35913 854 aa23.64■■□□□ 1.37
CIRBP-245ENST00000621399 NRXN2Q9P2S2 1712 aa23.64■■□□□ 1.37
CIRBP-245ENST00000621399 ARFGEF2Q9Y6D5 1785 aa23.63■■□□□ 1.37
CIRBP-245ENST00000621399 CCDC191Q8NCU4 936 aa23.63■■□□□ 1.37
CIRBP-245ENST00000621399 CWC25Q9NXE8 425 aaPredicted RBP23.63■■□□□ 1.37
CIRBP-245ENST00000621399 NOB1Q9ULX3 412 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms