RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 CCDC85AQ96PX6 553 aaPredicted RBP9.77□□□□□ -0.85
ALMS1-208ENST00000620466 PTPRTO14522 1441 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 PI4KAP2A4QPH2 592 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 FAM177A1Q8N128 213 aaPredicted RBP9.77□□□□□ -0.85
ALMS1-208ENST00000620466 PI4KAP1Q8N8J0 262 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 NUP133Q8WUM0 1156 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 U3KPZ7 1027 aaPredicted RBP9.77□□□□□ -0.85
ALMS1-208ENST00000620466 GUCY1B3Q02153 619 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 HSP90B2PQ58FF3 399 aa9.77□□□□□ -0.85
ALMS1-208ENST00000620466 PHF8Q9UPP1 1060 aa9.76□□□□□ -0.85
ALMS1-208ENST00000620466 ABCA8O94911 1581 aa9.76□□□□□ -0.85
ALMS1-208ENST00000620466 PRDM15P57071 1507 aaPredicted RBP9.76□□□□□ -0.85
ALMS1-208ENST00000620466 ANAPC15P60006 121 aa9.76□□□□□ -0.85
ALMS1-208ENST00000620466 MTHFSDQ2M296 383 aaKnown RBP9.76□□□□□ -0.85
ALMS1-208ENST00000620466 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
ALMS1-208ENST00000620466 PRIM1P49642 420 aaKnown RBP9.76□□□□□ -0.85
ALMS1-208ENST00000620466 ANO10Q9NW15 660 aa9.76□□□□□ -0.85
ALMS1-208ENST00000620466 CHPF2Q9P2E5 772 aa9.76□□□□□ -0.85
ALMS1-208ENST00000620466 GIMAP6Q6P9H5 292 aa9.76□□□□□ -0.85
ALMS1-208ENST00000620466 NACAP1Q9BZK3 213 aa9.76□□□□□ -0.85
ALMS1-208ENST00000620466 PDCL3Q9H2J4 239 aa9.76□□□□□ -0.85
ALMS1-208ENST00000620466 TFIP11Q9UBB9 837 aaKnown RBP9.76□□□□□ -0.85
ALMS1-208ENST00000620466 IFIT1P09914 478 aaKnown RBP9.75□□□□□ -0.85
ALMS1-208ENST00000620466 PPFIBP1Q86W92 1011 aa9.75□□□□□ -0.85
ALMS1-208ENST00000620466 PRDM10Q9NQV6 1147 aa9.75□□□□□ -0.85
ALMS1-208ENST00000620466 DDX19AQ9NUU7 478 aaKnown RBP9.75□□□□□ -0.85
ALMS1-208ENST00000620466 KDM5DQ9BY66 1539 aa9.75□□□□□ -0.85
ALMS1-208ENST00000620466 ZNF830Q96NB3 372 aaPredicted RBP9.75□□□□□ -0.85
ALMS1-208ENST00000620466 CCDC66A2RUB6 948 aa9.75□□□□□ -0.85
ALMS1-208ENST00000620466 ANXA1P04083 346 aa9.75□□□□□ -0.85
ALMS1-208ENST00000620466 HMGB1P09429 215 aaKnown RBP9.75□□□□□ -0.85
ALMS1-208ENST00000620466 MATR3P43243 847 aaKnown RBP eCLIP9.75□□□□□ -0.859e-6■■□□□ 13
ALMS1-208ENST00000620466 CBX1P83916 185 aa9.75□□□□□ -0.85
ALMS1-208ENST00000620466 NECAB1Q8N987 351 aa9.75□□□□□ -0.85
ALMS1-208ENST00000620466 HCLS1P14317 486 aaPredicted RBP9.75□□□□□ -0.85
ALMS1-208ENST00000620466 MPHOSPH10O00566 681 aaKnown RBP9.75□□□□□ -0.85
ALMS1-208ENST00000620466 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
ALMS1-208ENST00000620466 CCT2P78371 535 aaKnown RBP9.74□□□□□ -0.85
ALMS1-208ENST00000620466 RRAGDQ9NQL2 400 aaPredicted RBP9.74□□□□□ -0.85
ALMS1-208ENST00000620466 FOXO3O43524 673 aa9.74□□□□□ -0.85
ALMS1-208ENST00000620466 TNRQ92752 1358 aa9.74□□□□□ -0.85
ALMS1-208ENST00000620466 PTPN14Q15678 1187 aa9.74□□□□□ -0.85
ALMS1-208ENST00000620466 ATP10AO60312 1499 aa9.74□□□□□ -0.85
ALMS1-208ENST00000620466 CEBPAP49715 358 aaPredicted RBP9.74□□□□□ -0.85
ALMS1-208ENST00000620466 ERCC4Q92889 916 aaPredicted RBP9.74□□□□□ -0.85
ALMS1-208ENST00000620466 ZHX3Q9H4I2 956 aa9.74□□□□□ -0.85
ALMS1-208ENST00000620466 TRMT2AQ8IZ69 625 aaKnown RBP9.74□□□□□ -0.85
ALMS1-208ENST00000620466 IDH1O75874 414 aaKnown RBP9.74□□□□□ -0.85
ALMS1-208ENST00000620466 OTUD7AQ8TE49 926 aaPredicted RBP9.74□□□□□ -0.85
ALMS1-208ENST00000620466 PREX2Q70Z35 1606 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 CTAGE5O15320 804 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 PIP4K2AP48426 406 aaPredicted RBP9.73□□□□□ -0.85
ALMS1-208ENST00000620466 TDO2P48775 406 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 AKAP2Q9Y2D5 859 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 F13A1P00488 732 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 TNNT1P13805 278 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 IL13P35225 146 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 C8orf76Q96K31 380 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 C16orf45Q96MC5 204 aaPredicted RBP9.73□□□□□ -0.85
ALMS1-208ENST00000620466 NEK1Q96PY6 1258 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 UHRF1BP1LA0JNW5 1464 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 METTL24Q5JXM2 366 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 FSIP1Q8NA03 581 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 WASF1Q92558 559 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 CWC15Q9P013 229 aaKnown RBP9.73□□□□□ -0.85
ALMS1-208ENST00000620466 NCKAP5LQ9HCH0 1330 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 TTC37Q6PGP7 1564 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 DYNC1I1O14576 645 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 STX1AQ16623 288 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 CFAP100Q494V2 611 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 NOM1Q5C9Z4 860 aaKnown RBP9.73□□□□□ -0.85
ALMS1-208ENST00000620466 SOGA3Q5TF21 947 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 BICDL1Q6ZP65 573 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 TANGO6Q9C0B7 1094 aa9.73□□□□□ -0.85
ALMS1-208ENST00000620466 ERVK-7P63135 1459 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 TRPM2O94759 1503 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 AIDAQ96BJ3 306 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 HMG20BQ9P0W2 317 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 MPHOSPH8Q99549 860 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 NOL7Q9UMY1 257 aaKnown RBP9.72□□□□□ -0.85
ALMS1-208ENST00000620466 CHMLP26374 656 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 JARID2Q92833 1246 aaPredicted RBP9.72□□□□□ -0.85
ALMS1-208ENST00000620466 RBM8AQ9Y5S9 174 aaKnown RBP9.72□□□□□ -0.85
ALMS1-208ENST00000620466 A0A087WZG4 1122 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 GOLIM4O00461 696 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 TRPM1Q7Z4N2 1603 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 AK2P54819 239 aa9.72□□□□□ -0.85
ALMS1-208ENST00000620466 ZSCAN29Q8IWY8 852 aaPredicted RBP9.72□□□□□ -0.85
ALMS1-208ENST00000620466 ZKSCAN5Q9Y2L8 839 aa9.71□□□□□ -0.85
ALMS1-208ENST00000620466 SFPQP23246 707 aaKnown RBP eCLIP9.71□□□□□ -0.85
ALMS1-208ENST00000620466 DNM1Q05193 864 aaKnown RBP9.71□□□□□ -0.85
ALMS1-208ENST00000620466 UBAC1Q9BSL1 405 aa9.71□□□□□ -0.85
ALMS1-208ENST00000620466 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.85
ALMS1-208ENST00000620466 GOLGA8BA8MQT2 603 aa9.71□□□□□ -0.86
ALMS1-208ENST00000620466 G2E3Q7L622 706 aa9.71□□□□□ -0.86
ALMS1-208ENST00000620466 CGNQ9P2M7 1197 aaKnown RBP9.71□□□□□ -0.86
ALMS1-208ENST00000620466 FLT4P35916 1363 aa9.71□□□□□ -0.86
ALMS1-208ENST00000620466 ZNF521Q96K83 1311 aa9.71□□□□□ -0.86
ALMS1-208ENST00000620466 NMIQ13287 307 aaPredicted RBP9.71□□□□□ -0.86
ALMS1-208ENST00000620466 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms