RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
TMCO3-209ENST00000619336 LDHDQ86WU2 507 aa19.73■□□□□ 0.75
TMCO3-209ENST00000619336 MASTLQ96GX5 879 aa19.73■□□□□ 0.75
TMCO3-209ENST00000619336 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
TMCO3-209ENST00000619336 IQCA1LA6NCM1 817 aa19.72■□□□□ 0.75
TMCO3-209ENST00000619336 SOGA3Q5TF21 947 aa19.72■□□□□ 0.75
TMCO3-209ENST00000619336 NPM2Q86SE8 214 aaKnown RBP19.72■□□□□ 0.75
TMCO3-209ENST00000619336 TAF1DQ9H5J8 278 aaPredicted RBP19.72■□□□□ 0.75
TMCO3-209ENST00000619336 GNAT3A8MTJ3 354 aa19.71■□□□□ 0.75
TMCO3-209ENST00000619336 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
TMCO3-209ENST00000619336 DZIP3Q86Y13 1208 aaKnown RBP19.71■□□□□ 0.75
TMCO3-209ENST00000619336 L3MBTL3Q96JM7 780 aaPredicted RBP19.71■□□□□ 0.75
TMCO3-209ENST00000619336 FMNL2Q96PY5 1086 aa19.71■□□□□ 0.75
TMCO3-209ENST00000619336 KCNQ3O43525 872 aa19.7■□□□□ 0.74
TMCO3-209ENST00000619336 PIP4K2AP48426 406 aaPredicted RBP19.7■□□□□ 0.74
TMCO3-209ENST00000619336 VEGFBP49765 207 aa19.7■□□□□ 0.74
TMCO3-209ENST00000619336 EAPPQ56P03 285 aaPredicted RBP19.7■□□□□ 0.74
TMCO3-209ENST00000619336 AIDAQ96BJ3 306 aa19.7■□□□□ 0.74
TMCO3-209ENST00000619336 PRDM10Q9NQV6 1147 aa19.7■□□□□ 0.74
TMCO3-209ENST00000619336 COL3A1P02461 1466 aaPredicted RBP19.7■□□□□ 0.74
TMCO3-209ENST00000619336 ZNF541Q9H0D2 1346 aa19.7■□□□□ 0.74
TMCO3-209ENST00000619336 U2SURPO15042 1029 aaKnown RBP19.69■□□□□ 0.74
TMCO3-209ENST00000619336 CCDC93Q567U6 631 aa19.69■□□□□ 0.74
TMCO3-209ENST00000619336 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
TMCO3-209ENST00000619336 C7orf43Q8WVR3 580 aa19.69■□□□□ 0.74
TMCO3-209ENST00000619336 TMEM88BA6NKF7 163 aa19.68■□□□□ 0.74
TMCO3-209ENST00000619336 CTCFP49711 727 aaPredicted RBP19.68■□□□□ 0.74
TMCO3-209ENST00000619336 NBPF5PQ86XG9 351 aaPredicted RBP19.68■□□□□ 0.74
TMCO3-209ENST00000619336 ZNF277Q9NRM2 450 aaPredicted RBP19.68■□□□□ 0.74
TMCO3-209ENST00000619336 ITGBL1O95965 494 aaPredicted RBP19.67■□□□□ 0.74
TMCO3-209ENST00000619336 OLFM4Q6UX06 510 aa19.67■□□□□ 0.74
TMCO3-209ENST00000619336 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
TMCO3-209ENST00000619336 ADAMTSL1Q8N6G6 1762 aa19.67■□□□□ 0.74
TMCO3-209ENST00000619336 FKBP4Q02790 459 aaKnown RBP eCLIP19.66■□□□□ 0.74
TMCO3-209ENST00000619336 HACL1Q9UJ83 578 aa19.66■□□□□ 0.74
TMCO3-209ENST00000619336 CLEC11AQ9Y240 323 aa19.66■□□□□ 0.74
TMCO3-209ENST00000619336 USP16Q9Y5T5 823 aa19.66■□□□□ 0.74
TMCO3-209ENST00000619336 PRAMEF22A3QJZ6 481 aa19.65■□□□□ 0.74
TMCO3-209ENST00000619336 BTBD11A6QL63 1104 aa19.65■□□□□ 0.74
TMCO3-209ENST00000619336 NPR1P16066 1061 aa19.65■□□□□ 0.74
TMCO3-209ENST00000619336 LBX1P52954 281 aa19.65■□□□□ 0.74
TMCO3-209ENST00000619336 CNGB1Q14028 1251 aaPredicted RBP19.65■□□□□ 0.74
TMCO3-209ENST00000619336 CEMIPQ8WUJ3 1361 aa19.65■□□□□ 0.74
TMCO3-209ENST00000619336 PER1O15534 1290 aaPredicted RBP19.64■□□□□ 0.73
TMCO3-209ENST00000619336 EPHX2P34913 555 aa19.64■□□□□ 0.73
TMCO3-209ENST00000619336 WBP1LQ9NX94 342 aa19.64■□□□□ 0.73
TMCO3-209ENST00000619336 RNF123Q5XPI4 1314 aa19.64■□□□□ 0.73
TMCO3-209ENST00000619336 FAM177BA6PVY3 158 aa19.62■□□□□ 0.73
TMCO3-209ENST00000619336 MAP1SQ66K74 1059 aaPredicted RBP19.62■□□□□ 0.73
TMCO3-209ENST00000619336 CLEC4GQ6UXB4 293 aa19.62■□□□□ 0.73
TMCO3-209ENST00000619336 ZNF652Q9Y2D9 606 aa19.62■□□□□ 0.73
TMCO3-209ENST00000619336 CNTROBQ8N137 903 aa19.61■□□□□ 0.73
TMCO3-209ENST00000619336 PHACTR3Q96KR7 559 aa19.61■□□□□ 0.73
TMCO3-209ENST00000619336 NIP7Q9Y221 180 aaKnown RBP eCLIP19.61■□□□□ 0.73
TMCO3-209ENST00000619336 KLRG2A4D1S0 409 aaPredicted RBP19.6■□□□□ 0.73
TMCO3-209ENST00000619336 RASSF10A6NK89 507 aa19.6■□□□□ 0.73
TMCO3-209ENST00000619336 HSPA8P11142 646 aaKnown RBP19.6■□□□□ 0.73
TMCO3-209ENST00000619336 IARSP41252 1262 aaKnown RBP19.6■□□□□ 0.73
TMCO3-209ENST00000619336 DEFB115Q30KQ5 88 aa19.6■□□□□ 0.73
TMCO3-209ENST00000619336 RTKN2Q8IZC4 609 aa19.6■□□□□ 0.73
TMCO3-209ENST00000619336 PRKAR2BP31323 418 aa19.59■□□□□ 0.73
TMCO3-209ENST00000619336 TPTE2Q6XPS3 522 aa19.59■□□□□ 0.73
TMCO3-209ENST00000619336 PNMA8AQ86V59 439 aaPredicted RBP19.59■□□□□ 0.73
TMCO3-209ENST00000619336 SYNE4Q8N205 404 aa19.59■□□□□ 0.73
TMCO3-209ENST00000619336 FZD9O00144 591 aa19.58■□□□□ 0.72
TMCO3-209ENST00000619336 SNRPA1P09661 255 aaKnown RBP19.58■□□□□ 0.72
TMCO3-209ENST00000619336 ABT1Q9ULW3 272 aaKnown RBP19.58■□□□□ 0.72
TMCO3-209ENST00000619336 WDR33Q9C0J8 1336 aaKnown RBP19.57■□□□□ 0.72
TMCO3-209ENST00000619336 NBPF26B4DH59 902 aa19.57■□□□□ 0.72
TMCO3-209ENST00000619336 NBPF10Q6P3W6 841 aaKnown RBP19.57■□□□□ 0.72
TMCO3-209ENST00000619336 GPC2Q8N158 579 aa19.57■□□□□ 0.72
TMCO3-209ENST00000619336 NBPF15Q8N660 670 aa19.57■□□□□ 0.72
TMCO3-209ENST00000619336 ABHD8Q96I13 439 aa19.57■□□□□ 0.72
TMCO3-209ENST00000619336 LTBP1Q14766 1721 aa19.56■□□□□ 0.72
TMCO3-209ENST00000619336 COL4A5P29400 1685 aa19.56■□□□□ 0.72
TMCO3-209ENST00000619336 HLFQ16534 295 aa19.56■□□□□ 0.72
TMCO3-209ENST00000619336 MCM10Q7L590 875 aa19.56■□□□□ 0.72
TMCO3-209ENST00000619336 RSPH6AQ9H0K4 717 aa19.56■□□□□ 0.72
TMCO3-209ENST00000619336 SNED1Q8TER0 1413 aa19.56■□□□□ 0.72
TMCO3-209ENST00000619336 ALDH1B1P30837 517 aa19.55■□□□□ 0.72
TMCO3-209ENST00000619336 MAP2K1Q02750 393 aaPredicted RBP19.55■□□□□ 0.72
TMCO3-209ENST00000619336 GJA3Q9Y6H8 435 aa19.55■□□□□ 0.72
TMCO3-209ENST00000619336 GTF2E1P29083 439 aaPredicted RBP19.54■□□□□ 0.72
TMCO3-209ENST00000619336 FMR1Q06787 632 aaKnown RBP eCLIP19.54■□□□□ 0.72
TMCO3-209ENST00000619336 FAM161AQ3B820 660 aa19.54■□□□□ 0.72
TMCO3-209ENST00000619336 JDP2Q8WYK2 163 aa19.54■□□□□ 0.72
TMCO3-209ENST00000619336 DDX21Q9NR30 783 aaKnown RBP eCLIP19.54■□□□□ 0.72
TMCO3-209ENST00000619336 ABCC12Q96J65 1359 aa19.54■□□□□ 0.72
TMCO3-209ENST00000619336 THSD7BQ9C0I4 1608 aa19.54■□□□□ 0.72
TMCO3-209ENST00000619336 RTF1Q92541 710 aaKnown RBP19.53■□□□□ 0.72
TMCO3-209ENST00000619336 PSMD1Q99460 953 aa19.53■□□□□ 0.72
TMCO3-209ENST00000619336 NPC1L1Q9UHC9 1359 aa19.53■□□□□ 0.72
TMCO3-209ENST00000619336 LAMB4A4D0S4 1761 aa19.52■□□□□ 0.72
TMCO3-209ENST00000619336 RGL2O15211 777 aa19.52■□□□□ 0.72
TMCO3-209ENST00000619336 EIF6P56537 245 aaKnown RBP19.52■□□□□ 0.72
TMCO3-209ENST00000619336 DCTN1Q14203 1278 aa19.52■□□□□ 0.72
TMCO3-209ENST00000619336 PAXIP1Q6ZW49 1069 aaPredicted RBP19.52■□□□□ 0.72
TMCO3-209ENST00000619336 NUTM1Q86Y26 1132 aa19.52■□□□□ 0.72
TMCO3-209ENST00000619336 SLC34A2O95436 690 aa19.51■□□□□ 0.71
TMCO3-209ENST00000619336 LMOD1P29536 600 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms