RNA–Protein interactions for RNA: ENST00000618048.2

KCNMA1-224, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-224ENST00000618048 VEGFAP15692 232 aaPredicted RBP28.49■■■□□ 2.15
KCNMA1-224ENST00000618048 CLEC4GQ6UXB4 293 aa28.48■■■□□ 2.15
KCNMA1-224ENST00000618048 ZNF652Q9Y2D9 606 aa28.48■■■□□ 2.15
KCNMA1-224ENST00000618048 FER1L6Q2WGJ9 1857 aa28.47■■■□□ 2.15
KCNMA1-224ENST00000618048 HTRA3P83110 453 aa28.47■■■□□ 2.15
KCNMA1-224ENST00000618048 STYK1Q6J9G0 422 aa28.47■■■□□ 2.15
KCNMA1-224ENST00000618048 CNKSR1Q969H4 720 aa28.47■■■□□ 2.15
KCNMA1-224ENST00000618048 SRGNP10124 158 aa28.46■■■□□ 2.15
KCNMA1-224ENST00000618048 NBPF5PQ86XG9 351 aaPredicted RBP28.45■■■□□ 2.14
KCNMA1-224ENST00000618048 ARFGEF2Q9Y6D5 1785 aa28.45■■■□□ 2.14
KCNMA1-224ENST00000618048 LTBP3Q9NS15 1303 aa28.44■■■□□ 2.14
KCNMA1-224ENST00000618048 ERFEQ4G0M1 354 aa28.44■■■□□ 2.14
KCNMA1-224ENST00000618048 DPY19L2Q6NUT2 758 aa28.44■■■□□ 2.14
KCNMA1-224ENST00000618048 PRPF40BQ6NWY9 871 aaKnown RBP28.44■■■□□ 2.14
KCNMA1-224ENST00000618048 KLRG1Q96E93 195 aa28.44■■■□□ 2.14
KCNMA1-224ENST00000618048 MASTLQ96GX5 879 aa28.44■■■□□ 2.14
KCNMA1-224ENST00000618048 CACNA1SQ13698 1873 aa28.44■■■□□ 2.14
KCNMA1-224ENST00000618048 NBPF26B4DH59 902 aa28.43■■■□□ 2.14
KCNMA1-224ENST00000618048 NEFMP07197 916 aa28.43■■■□□ 2.14
KCNMA1-224ENST00000618048 TAF7Q15545 349 aaPredicted RBP28.43■■■□□ 2.14
KCNMA1-224ENST00000618048 NBPF10Q6P3W6 841 aaKnown RBP28.43■■■□□ 2.14
KCNMA1-224ENST00000618048 NBPF15Q8N660 670 aa28.43■■■□□ 2.14
KCNMA1-224ENST00000618048 TAOK3Q9H2K8 898 aa28.43■■■□□ 2.14
KCNMA1-224ENST00000618048 SLX4Q8IY92 1834 aa28.43■■■□□ 2.14
KCNMA1-224ENST00000618048 LAMB4A4D0S4 1761 aa28.42■■■□□ 2.14
KCNMA1-224ENST00000618048 DICER1Q9UPY3 1922 aaKnown RBP28.42■■■□□ 2.14
KCNMA1-224ENST00000618048 SOGA3Q5TF21 947 aa28.42■■■□□ 2.14
KCNMA1-224ENST00000618048 RGL2O15211 777 aa28.41■■■□□ 2.14
KCNMA1-224ENST00000618048 NIP7Q9Y221 180 aaKnown RBP eCLIP28.4■■■□□ 2.14
KCNMA1-224ENST00000618048 MIS18AQ9NYP9 233 aa28.38■■■□□ 2.13
KCNMA1-224ENST00000618048 DLG5Q8TDM6 1919 aa28.37■■■□□ 2.13
KCNMA1-224ENST00000618048 KDM3BQ7LBC6 1761 aa28.37■■■□□ 2.13
KCNMA1-224ENST00000618048 TPTE2Q6XPS3 522 aa28.37■■■□□ 2.13
KCNMA1-224ENST00000618048 JMYQ8N9B5 988 aa28.37■■■□□ 2.13
KCNMA1-224ENST00000618048 PNISRQ8TF01 805 aaKnown RBP28.37■■■□□ 2.13
KCNMA1-224ENST00000618048 POTECB2RU33 542 aa28.36■■■□□ 2.13
KCNMA1-224ENST00000618048 NPR1P16066 1061 aa28.36■■■□□ 2.13
KCNMA1-224ENST00000618048 CCDC93Q567U6 631 aa28.34■■■□□ 2.13
KCNMA1-224ENST00000618048 KLRG2A4D1S0 409 aaPredicted RBP28.33■■■□□ 2.13
KCNMA1-224ENST00000618048 FAM177BA6PVY3 158 aa28.33■■■□□ 2.13
KCNMA1-224ENST00000618048 HLFQ16534 295 aa28.33■■■□□ 2.13
KCNMA1-224ENST00000618048 C7orf43Q8WVR3 580 aa28.33■■■□□ 2.13
KCNMA1-224ENST00000618048 PLEKHF1Q96S99 279 aa28.33■■■□□ 2.13
KCNMA1-224ENST00000618048 NFE2L2Q16236 605 aa28.32■■■□□ 2.12
KCNMA1-224ENST00000618048 MAPK8IP3Q9UPT6 1336 aa28.3■■■□□ 2.12
KCNMA1-224ENST00000618048 DDNO94850 711 aaPredicted RBP28.3■■■□□ 2.12
KCNMA1-224ENST00000618048 GTF2E1P29083 439 aaPredicted RBP28.3■■■□□ 2.12
KCNMA1-224ENST00000618048 EIF4A1P60842 406 aaKnown RBP28.29■■■□□ 2.12
KCNMA1-224ENST00000618048 NGEFQ8N5V2 710 aa28.29■■■□□ 2.12
KCNMA1-224ENST00000618048 THUMPD2Q9BTF0 503 aaKnown RBP28.29■■■□□ 2.12
KCNMA1-224ENST00000618048 PNNQ9H307 717 aaKnown RBP28.28■■■□□ 2.12
KCNMA1-224ENST00000618048 ERVV-1B6SEH8 477 aa28.27■■■□□ 2.12
KCNMA1-224ENST00000618048 FKBP4Q02790 459 aaKnown RBP eCLIP28.27■■■□□ 2.12
KCNMA1-224ENST00000618048 MAP3K15Q6ZN16 1313 aa28.26■■■□□ 2.11
KCNMA1-224ENST00000618048 KIF6Q6ZMV9 814 aa28.26■■■□□ 2.11
KCNMA1-224ENST00000618048 NYXQ9GZU5 481 aa28.26■■■□□ 2.11
KCNMA1-224ENST00000618048 RRP7AQ9Y3A4 280 aaKnown RBP28.26■■■□□ 2.11
KCNMA1-224ENST00000618048 ABCC12Q96J65 1359 aa28.25■■■□□ 2.11
KCNMA1-224ENST00000618048 ALDH1B1P30837 517 aa28.25■■■□□ 2.11
KCNMA1-224ENST00000618048 RTKN2Q8IZC4 609 aa28.25■■■□□ 2.11
KCNMA1-224ENST00000618048 CHADLQ6NUI6 762 aa28.24■■■□□ 2.11
KCNMA1-224ENST00000618048 OLFM4Q6UX06 510 aa28.24■■■□□ 2.11
KCNMA1-224ENST00000618048 ZNF277Q9NRM2 450 aaPredicted RBP28.24■■■□□ 2.11
KCNMA1-224ENST00000618048 NUP98P52948 1817 aa28.24■■■□□ 2.11
KCNMA1-224ENST00000618048 IQCA1LA6NCM1 817 aa28.23■■■□□ 2.11
KCNMA1-224ENST00000618048 MYL6BP14649 208 aa28.23■■■□□ 2.11
KCNMA1-224ENST00000618048 TTLL7Q6ZT98 887 aa28.23■■■□□ 2.11
KCNMA1-224ENST00000618048 CRY2Q49AN0 593 aa28.22■■■□□ 2.11
KCNMA1-224ENST00000618048 NUTM1Q86Y26 1132 aa28.22■■■□□ 2.11
KCNMA1-224ENST00000618048 L3MBTL3Q96JM7 780 aaPredicted RBP28.22■■■□□ 2.11
KCNMA1-224ENST00000618048 IBTKQ9P2D0 1353 aaPredicted RBP28.22■■■□□ 2.11
KCNMA1-224ENST00000618048 POTEIP0CG38 1075 aa28.21■■■□□ 2.11
KCNMA1-224ENST00000618048 POTEJP0CG39 1038 aa28.21■■■□□ 2.11
KCNMA1-224ENST00000618048 ZBTB3Q9H5J0 574 aa28.21■■■□□ 2.11
KCNMA1-224ENST00000618048 ERBB4Q15303 1308 aa28.2■■■□□ 2.11
KCNMA1-224ENST00000618048 SCN4AP35499 1836 aa28.2■■■□□ 2.11
KCNMA1-224ENST00000618048 RIC1Q4ADV7 1423 aa28.2■■■□□ 2.11
KCNMA1-224ENST00000618048 GPTP24298 496 aa28.2■■■□□ 2.1
KCNMA1-224ENST00000618048 ZNF541Q9H0D2 1346 aa28.19■■■□□ 2.1
KCNMA1-224ENST00000618048 UBN2Q6ZU65 1347 aa28.18■■■□□ 2.1
KCNMA1-224ENST00000618048 TAF1DQ9H5J8 278 aaPredicted RBP28.18■■■□□ 2.1
KCNMA1-224ENST00000618048 TSPYL4Q9UJ04 414 aa28.18■■■□□ 2.1
KCNMA1-224ENST00000618048 IARSP41252 1262 aaKnown RBP28.17■■■□□ 2.1
KCNMA1-224ENST00000618048 COL13A1Q5TAT6 717 aaPredicted RBP28.17■■■□□ 2.1
KCNMA1-224ENST00000618048 LDHDQ86WU2 507 aa28.17■■■□□ 2.1
KCNMA1-224ENST00000618048 RPGRQ92834 1020 aaKnown RBP28.17■■■□□ 2.1
KCNMA1-224ENST00000618048 CREBZFQ9NS37 354 aa28.17■■■□□ 2.1
KCNMA1-224ENST00000618048 SNED1Q8TER0 1413 aa28.17■■■□□ 2.1
KCNMA1-224ENST00000618048 SYNE4Q8N205 404 aa28.16■■■□□ 2.1
KCNMA1-224ENST00000618048 SUSD4Q5VX71 490 aa28.15■■■□□ 2.1
KCNMA1-224ENST00000618048 GIGYF2Q6Y7W6 1299 aaKnown RBP28.15■■■□□ 2.1
KCNMA1-224ENST00000618048 PSMD1Q99460 953 aa28.15■■■□□ 2.1
KCNMA1-224ENST00000618048 HSPA1AP0DMV8 641 aaKnown RBP28.14■■■□□ 2.1
KCNMA1-224ENST00000618048 HSPA1BP0DMV9 641 aaKnown RBP28.14■■■□□ 2.1
KCNMA1-224ENST00000618048 RIPK4P57078 832 aa28.14■■■□□ 2.1
KCNMA1-224ENST00000618048 RALBP1Q15311 655 aa28.14■■■□□ 2.1
KCNMA1-224ENST00000618048 CC2D2BQ6DHV5 1058 aa28.14■■■□□ 2.1
KCNMA1-224ENST00000618048 ZNF34Q8IZ26 560 aa28.14■■■□□ 2.1
KCNMA1-224ENST00000618048 HACL1Q9UJ83 578 aa28.14■■■□□ 2.1
KCNMA1-224ENST00000618048 NTSR2O95665 410 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms