RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 ITPK1Q13572 414 aa16.74■□□□□ 0.27
NEAT1-204ENST00000612303 CCDC87Q9NVE4 849 aa16.74■□□□□ 0.27
NEAT1-204ENST00000612303 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
NEAT1-204ENST00000612303 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
NEAT1-204ENST00000612303 HMGB2P26583 209 aaKnown RBP16.73■□□□□ 0.27
NEAT1-204ENST00000612303 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
NEAT1-204ENST00000612303 TTLL7Q6ZT98 887 aa16.73■□□□□ 0.27
NEAT1-204ENST00000612303 PTF1AQ7RTS3 328 aa16.73■□□□□ 0.27
NEAT1-204ENST00000612303 CRKLP46109 303 aaKnown RBP16.72■□□□□ 0.27
NEAT1-204ENST00000612303 EIF5P55010 431 aaKnown RBP16.72■□□□□ 0.27
NEAT1-204ENST00000612303 RC3H1Q5TC82 1133 aaKnown RBP16.72■□□□□ 0.27
NEAT1-204ENST00000612303 POTEAQ6S8J7 498 aa16.72■□□□□ 0.27
NEAT1-204ENST00000612303 KIF6Q6ZMV9 814 aa16.72■□□□□ 0.27
NEAT1-204ENST00000612303 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
NEAT1-204ENST00000612303 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
NEAT1-204ENST00000612303 ZBTB1Q9Y2K1 713 aa16.72■□□□□ 0.27
NEAT1-204ENST00000612303 NUP188Q5SRE5 1749 aa16.72■□□□□ 0.27
NEAT1-204ENST00000612303 UTYO14607 1347 aa16.71■□□□□ 0.27
NEAT1-204ENST00000612303 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
NEAT1-204ENST00000612303 IGKV5-2P06315 115 aa16.71■□□□□ 0.27
NEAT1-204ENST00000612303 UBTFL1P0CB47 393 aaPredicted RBP16.71■□□□□ 0.27
NEAT1-204ENST00000612303 CNTNAP4Q9C0A0 1308 aa16.7■□□□□ 0.26
NEAT1-204ENST00000612303 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
NEAT1-204ENST00000612303 ERVV-1B6SEH8 477 aa16.7■□□□□ 0.26
NEAT1-204ENST00000612303 TRIM28Q13263 835 aaKnown RBP16.7■□□□□ 0.26
NEAT1-204ENST00000612303 MYD88Q99836 296 aa16.7■□□□□ 0.26
NEAT1-204ENST00000612303 C1orf115Q9H7X2 142 aa16.7■□□□□ 0.26
NEAT1-204ENST00000612303 C9orf78Q9NZ63 289 aaPredicted RBP16.7■□□□□ 0.26
NEAT1-204ENST00000612303 MAP3K15Q6ZN16 1313 aa16.7■□□□□ 0.26
NEAT1-204ENST00000612303 GRM8O00222 908 aa16.69■□□□□ 0.26
NEAT1-204ENST00000612303 TCIRG1Q13488 830 aa16.69■□□□□ 0.26
NEAT1-204ENST00000612303 GCKRQ14397 625 aa16.69■□□□□ 0.26
NEAT1-204ENST00000612303 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
NEAT1-204ENST00000612303 HSP90AB3PQ58FF7 597 aa16.69■□□□□ 0.26
NEAT1-204ENST00000612303 CEP85Q6P2H3 762 aa16.69■□□□□ 0.26
NEAT1-204ENST00000612303 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
NEAT1-204ENST00000612303 SMC5Q8IY18 1101 aa16.69■□□□□ 0.26
NEAT1-204ENST00000612303 CCNL1Q9UK58 526 aaPredicted RBP16.69■□□□□ 0.26
NEAT1-204ENST00000612303 AFDNP55196 1824 aaKnown RBP16.68■□□□□ 0.26
NEAT1-204ENST00000612303 TAF1LQ8IZX4 1826 aa16.68■□□□□ 0.26
NEAT1-204ENST00000612303 A0A087WZG4 1122 aa16.68■□□□□ 0.26
NEAT1-204ENST00000612303 HMMRO75330 724 aa16.68■□□□□ 0.26
NEAT1-204ENST00000612303 TRIM37O94972 964 aa16.68■□□□□ 0.26
NEAT1-204ENST00000612303 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
NEAT1-204ENST00000612303 GCC1Q96CN9 775 aa16.68■□□□□ 0.26
NEAT1-204ENST00000612303 RGL2O15211 777 aa16.67■□□□□ 0.26
NEAT1-204ENST00000612303 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
NEAT1-204ENST00000612303 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
NEAT1-204ENST00000612303 SLC27A3Q5K4L6 730 aa16.67■□□□□ 0.26
NEAT1-204ENST00000612303 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
NEAT1-204ENST00000612303 CCDC191Q8NCU4 936 aa16.67■□□□□ 0.26
NEAT1-204ENST00000612303 ISCA1Q9BUE6 129 aa16.67■□□□□ 0.26
NEAT1-204ENST00000612303 ZBTB3Q9H5J0 574 aa16.67■□□□□ 0.26
NEAT1-204ENST00000612303 LRRFIP2Q9Y608 721 aaKnown RBP16.67■□□□□ 0.26
NEAT1-204ENST00000612303 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
NEAT1-204ENST00000612303 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
NEAT1-204ENST00000612303 NUP98P52948 1817 aa16.66■□□□□ 0.26
NEAT1-204ENST00000612303 COL15A1P39059 1388 aa16.65■□□□□ 0.26
NEAT1-204ENST00000612303 PLSCR1O15162 318 aa16.65■□□□□ 0.26
NEAT1-204ENST00000612303 RPS6KA4O75676 772 aa16.65■□□□□ 0.26
NEAT1-204ENST00000612303 DCTPP1Q9H773 170 aa16.65■□□□□ 0.26
NEAT1-204ENST00000612303 CWC25Q9NXE8 425 aaPredicted RBP16.65■□□□□ 0.26
NEAT1-204ENST00000612303 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
NEAT1-204ENST00000612303 H7C1W4 665 aa16.64■□□□□ 0.25
NEAT1-204ENST00000612303 MTX1Q13505 466 aa16.64■□□□□ 0.25
NEAT1-204ENST00000612303 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
NEAT1-204ENST00000612303 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
NEAT1-204ENST00000612303 SSH3Q8TE77 659 aa16.62■□□□□ 0.25
NEAT1-204ENST00000612303 ARXQ96QS3 562 aa16.62■□□□□ 0.25
NEAT1-204ENST00000612303 PDZRN3Q9UPQ7 1066 aa16.62■□□□□ 0.25
NEAT1-204ENST00000612303 TBC1D2BQ9UPU7 963 aa16.62■□□□□ 0.25
NEAT1-204ENST00000612303 CAMTA2O94983 1202 aa16.61■□□□□ 0.25
NEAT1-204ENST00000612303 CASP7P55210 303 aa16.61■□□□□ 0.25
NEAT1-204ENST00000612303 KCNQ4P56696 695 aa16.61■□□□□ 0.25
NEAT1-204ENST00000612303 NUCB1Q02818 461 aa16.61■□□□□ 0.25
NEAT1-204ENST00000612303 POLA2Q14181 598 aa16.61■□□□□ 0.25
NEAT1-204ENST00000612303 HLFQ16534 295 aa16.61■□□□□ 0.25
NEAT1-204ENST00000612303 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
NEAT1-204ENST00000612303 PPP1R42Q7Z4L9 355 aa16.6■□□□□ 0.25
NEAT1-204ENST00000612303 ZNF34Q8IZ26 560 aa16.6■□□□□ 0.25
NEAT1-204ENST00000612303 SUCLG2Q96I99 432 aa16.6■□□□□ 0.25
NEAT1-204ENST00000612303 LRRC4BQ9NT99 713 aa16.6■□□□□ 0.25
NEAT1-204ENST00000612303 ZNF652Q9Y2D9 606 aa16.6■□□□□ 0.25
NEAT1-204ENST00000612303 RTCBQ9Y3I0 505 aaKnown RBP16.6■□□□□ 0.25
NEAT1-204ENST00000612303 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
NEAT1-204ENST00000612303 PCCAP05165 728 aaPredicted RBP16.59■□□□□ 0.25
NEAT1-204ENST00000612303 ADRA2BP18089 450 aa16.59■□□□□ 0.25
NEAT1-204ENST00000612303 TXNRD1Q16881 649 aa16.59■□□□□ 0.25
NEAT1-204ENST00000612303 UBE3BQ7Z3V4 1068 aa16.59■□□□□ 0.25
NEAT1-204ENST00000612303 NLRP10Q86W26 655 aa16.59■□□□□ 0.25
NEAT1-204ENST00000612303 KAZALD1Q96I82 304 aa16.59■□□□□ 0.25
NEAT1-204ENST00000612303 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
NEAT1-204ENST00000612303 BCORQ6W2J9 1755 aa16.59■□□□□ 0.25
NEAT1-204ENST00000612303 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
NEAT1-204ENST00000612303 GNPATO15228 680 aa16.58■□□□□ 0.24
NEAT1-204ENST00000612303 APBA3O96018 575 aa16.58■□□□□ 0.24
NEAT1-204ENST00000612303 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.24
NEAT1-204ENST00000612303 PARP10Q53GL7 1025 aa16.58■□□□□ 0.24
NEAT1-204ENST00000612303 ZBTB38Q8NAP3 1195 aaPredicted RBP16.58■□□□□ 0.24
NEAT1-204ENST00000612303 AK7Q96M32 723 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms