RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.45□□□□□ -1.7
RNF38-210ENST00000611646 DNAJC25Q9H1X3 360 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 DACT1Q9NYF0 836 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 RAI14Q9P0K7 980 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 DBF4Q9UBU7 674 aaPredicted RBP4.45□□□□□ -1.7
RNF38-210ENST00000611646 ITSN2Q9NZM3 1697 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 ADAMTS12P58397 1594 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 ABCC10Q5T3U5 1492 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 UHRF1BP1Q6BDS2 1440 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 NSD2O96028 1365 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 POLR3GO15318 223 aaPredicted RBP4.45□□□□□ -1.7
RNF38-210ENST00000611646 GSPT1P15170 499 aaKnown RBP4.45□□□□□ -1.7
RNF38-210ENST00000611646 ZNF165P49910 485 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 PTPN14Q15678 1187 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 IMMTQ16891 758 aaKnown RBP4.45□□□□□ -1.7
RNF38-210ENST00000611646 ARHGAP45Q92619 1136 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 AIDAQ96BJ3 306 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 BRMS1Q9HCU9 246 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 LRP2BPQ9P2M1 347 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 IQSEC3Q9UPP2 1182 aaPredicted RBP4.45□□□□□ -1.7
RNF38-210ENST00000611646 RXRAP19793 462 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 LARP1Q6PKG0 1096 aaKnown RBP4.45□□□□□ -1.7
RNF38-210ENST00000611646 CCDC129Q6ZRS4 1044 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 CCDC186Q7Z3E2 898 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 TMC6Q7Z403 805 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 MTERF4Q7Z6M4 381 aaKnown RBP4.45□□□□□ -1.7
RNF38-210ENST00000611646 MICU3Q86XE3 530 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 EVI5LQ96CN4 794 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 C8orf76Q96K31 380 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 EYA1Q99502 592 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 ZHX3Q9H4I2 956 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 URI1O94763 535 aaPredicted RBP4.45□□□□□ -1.7
RNF38-210ENST00000611646 XBP1P17861 261 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 CHMLP26374 656 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 DNA2P51530 1060 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 UBE2HP62256 183 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 ATP8B2P98198 1209 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 IKQ13123 557 aaPredicted RBP4.45□□□□□ -1.7
RNF38-210ENST00000611646 HSP90B2PQ58FF3 399 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 LUZP1Q86V48 1076 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 GAS2L3Q86XJ1 694 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 ANKLE2Q86XL3 938 aa4.45□□□□□ -1.7
RNF38-210ENST00000611646 MARCKSP29966 332 aaPredicted RBP4.44□□□□□ -1.7
RNF38-210ENST00000611646 NOLC1Q14978 699 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNF38-210ENST00000611646 CCDC70Q6NSX1 233 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 COPS6Q7L5N1 327 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 PPFIBP1Q86W92 1011 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 TRIM22Q8IYM9 498 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 ANKRD24Q8TF21 1146 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 XAGE3Q8WTP9 111 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 NEK1Q96PY6 1258 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 SCAND2PQ9GZW5 306 aaPredicted RBP4.44□□□□□ -1.7
RNF38-210ENST00000611646 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNF38-210ENST00000611646 F13A1P00488 732 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 PTGS1P23219 599 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 KRT32Q14532 448 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 Q6ZUG5 572 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 SH2B1Q9NRF2 756 aaPredicted RBP4.44□□□□□ -1.7
RNF38-210ENST00000611646 NUP160Q12769 1436 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 ASXL2Q76L83 1435 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 KIF21AQ7Z4S6 1674 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 SFPQP23246 707 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNF38-210ENST00000611646 AXDND1Q5T1B0 1012 aaPredicted RBP4.44□□□□□ -1.7
RNF38-210ENST00000611646 ERCC4Q92889 916 aaPredicted RBP4.44□□□□□ -1.7
RNF38-210ENST00000611646 CCDC47Q96A33 483 aaKnown RBP4.44□□□□□ -1.7
RNF38-210ENST00000611646 CEP89Q96ST8 783 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 RUFY1Q96T51 708 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 UBAC1Q9BSL1 405 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 U3KPZ7 1027 aaPredicted RBP4.44□□□□□ -1.7
RNF38-210ENST00000611646 ARHGEF12Q9NZN5 1544 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 PIK3R4Q99570 1358 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 SSBP05455 408 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNF38-210ENST00000611646 IL13P35225 146 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 RBM25P49756 843 aaKnown RBP4.44□□□□□ -1.7
RNF38-210ENST00000611646 ENOX2Q16206 610 aaKnown RBP4.44□□□□□ -1.7
RNF38-210ENST00000611646 FILIP1LQ4L180 1135 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 TANGO6Q9C0B7 1094 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 PDCL3Q9H2J4 239 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 LGR6Q9HBX8 967 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 USP16Q9Y5T5 823 aa4.44□□□□□ -1.7
RNF38-210ENST00000611646 ZNF213O14771 459 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 NBPF7P0C2Y1 421 aaPredicted RBP4.43□□□□□ -1.7
RNF38-210ENST00000611646 SYT1P21579 422 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 EPS15P42566 896 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 APOBRQ0VD83 1088 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 JMYQ8N9B5 988 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 FAM227BQ96M60 508 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 CENPHQ9H3R5 247 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 RNF216Q9NWF9 866 aaPredicted RBP4.43□□□□□ -1.7
RNF38-210ENST00000611646 PALD1Q9ULE6 856 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 ABCA5Q8WWZ7 1642 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 SBNO2Q9Y2G9 1366 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 OFD1O75665 1012 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 NFATC2IPQ8NCF5 419 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 EDC3Q96F86 508 aaKnown RBP4.43□□□□□ -1.7
RNF38-210ENST00000611646 BICC1Q9H694 974 aaKnown RBP4.43□□□□□ -1.7
RNF38-210ENST00000611646 CGNQ9P2M7 1197 aaKnown RBP4.43□□□□□ -1.7
RNF38-210ENST00000611646 ZKSCAN5Q9Y2L8 839 aa4.43□□□□□ -1.7
RNF38-210ENST00000611646 CFAP65Q6ZU64 1925 aaKnown RBP4.43□□□□□ -1.7
RNF38-210ENST00000611646 SAMD9Q5K651 1589 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms