RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 DRC1Q96MC2 740 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 SRRTQ9BXP5 876 aaKnown RBP15.07■□□□□ 0
USP6NL-205ENST00000609104 C11orf95C9JLR9 678 aaPredicted RBP15.07■□□□□ 0
USP6NL-205ENST00000609104 HSF2BPO75031 334 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 COMMD10Q9Y6G5 202 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 MAP3K12Q12852 859 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 CUL5Q93034 780 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 PUS7Q96PZ0 661 aaKnown RBP15.07■□□□□ 0
USP6NL-205ENST00000609104 CALML4Q96GE6 196 aa15.07■□□□□ 0
USP6NL-205ENST00000609104 GOLGA8AA7E2F4 631 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 F6X3S4 739 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 PRC1O43663 620 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 ATP2C2O75185 946 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 SSH1Q8WYL5 1049 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 MMRN2Q9H8L6 949 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 C9orf84Q5VXU9 1444 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 ZC3H6P61129 1189 aaKnown RBP15.06■□□□□ 0
USP6NL-205ENST00000609104 SPECC1LQ69YQ0 1117 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 VAT1LQ9HCJ6 419 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 DDX19AQ9NUU7 478 aaKnown RBP15.06■□□□□ 0
USP6NL-205ENST00000609104 ZNF652Q9Y2D9 606 aa15.06■□□□□ 0
USP6NL-205ENST00000609104 HFM1A2PYH4 1435 aa15.05■□□□□ 0
USP6NL-205ENST00000609104 STX6O43752 255 aa15.05■□□□□ 0
USP6NL-205ENST00000609104 ZNF830Q96NB3 372 aaPredicted RBP15.05■□□□□ 0
USP6NL-205ENST00000609104 PAIP2Q9BPZ3 127 aaKnown RBP15.05■□□□□ 0
USP6NL-205ENST00000609104 PUF60Q9UHX1 559 aaKnown RBP15.05■□□□□ -0
USP6NL-205ENST00000609104 CCDC194A0A1B0GVG4 234 aa15.05■□□□□ -0
USP6NL-205ENST00000609104 MYO1BO43795 1136 aa15.05■□□□□ -0
USP6NL-205ENST00000609104 SLC4A8Q2Y0W8 1093 aa15.05■□□□□ -0
USP6NL-205ENST00000609104 CCDC40Q4G0X9 1142 aa15.05■□□□□ -0
USP6NL-205ENST00000609104 SYCP3Q8IZU3 236 aa15.05■□□□□ -0
USP6NL-205ENST00000609104 RARSP54136 660 aaKnown RBP15.05■□□□□ -0
USP6NL-205ENST00000609104 BMS1Q14692 1282 aaKnown RBP15.05■□□□□ -0
USP6NL-205ENST00000609104 CCDC12Q8WUD4 166 aaPredicted RBP15.05■□□□□ -0
USP6NL-205ENST00000609104 PRDM11Q9NQV5 511 aa15.05■□□□□ -0
USP6NL-205ENST00000609104 PAXBP1Q9Y5B6 917 aa15.05■□□□□ -0
USP6NL-205ENST00000609104 A0A1W2PRG0 241 aa15.05■□□□□ -0
USP6NL-205ENST00000609104 GNG11P61952 73 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 AMPD3Q01432 767 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 IFIT5Q13325 482 aaKnown RBP15.04■□□□□ -0
USP6NL-205ENST00000609104 CETN1Q12798 172 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 TAF7Q15545 349 aaPredicted RBP15.04■□□□□ -0
USP6NL-205ENST00000609104 BAG4O95429 457 aaKnown RBP15.04■□□□□ -0
USP6NL-205ENST00000609104 MNAT1P51948 309 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 GIMAP6Q6P9H5 292 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 TTC16Q8NEE8 873 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 IGF1RP08069 1367 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 ANKRD18BA2A2Z9 1011 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 PPFIA3O75145 1194 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 TCP11L1Q9NUJ3 509 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
USP6NL-205ENST00000609104 ZNF165P49910 485 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 GOLGA6L9A6NEM1 432 aa15.04■□□□□ -0
USP6NL-205ENST00000609104 ZPR1O75312 459 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
USP6NL-205ENST00000609104 UBE2HP62256 183 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 ZSCAN23Q3MJ62 389 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 TMEM67Q5HYA8 995 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 DYNC1I1O14576 645 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 SLC5A1P13866 664 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 CEP112Q8N8E3 955 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 GRIPAP1Q4V328 841 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 SPATA24Q86W54 205 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 UBASH3AP57075 661 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 PPP1R14CQ8TAE6 165 aa15.03■□□□□ -0
USP6NL-205ENST00000609104 TBC1D9Q6ZT07 1266 aa15.02■□□□□ -0
USP6NL-205ENST00000609104 ALDH1L2Q3SY69 923 aa15.02■□□□□ -0
USP6NL-205ENST00000609104 FAM114A1Q8IWE2 563 aa15.02■□□□□ -0
USP6NL-205ENST00000609104 C6orf163Q5TEZ5 329 aa15.02□□□□□ -0.01
USP6NL-205ENST00000609104 WDR78Q5VTH9 848 aa15.02□□□□□ -0.01
USP6NL-205ENST00000609104 RNF216Q9NWF9 866 aaPredicted RBP15.02□□□□□ -0.01
USP6NL-205ENST00000609104 EVI5LQ96CN4 794 aa15.02□□□□□ -0.01
USP6NL-205ENST00000609104 KIF20AO95235 890 aa15.02□□□□□ -0.01
USP6NL-205ENST00000609104 RAB11FIP4Q86YS3 637 aa15.02□□□□□ -0.01
USP6NL-205ENST00000609104 TIGD1Q96MW7 591 aa15.02□□□□□ -0.01
USP6NL-205ENST00000609104 USP16Q9Y5T5 823 aa15.02□□□□□ -0.01
USP6NL-205ENST00000609104 IDEP14735 1019 aa15.02□□□□□ -0.01
USP6NL-205ENST00000609104 USHBP1Q8N6Y0 703 aa15.02□□□□□ -0.01
USP6NL-205ENST00000609104 THEMISQ8N1K5 641 aaPredicted RBP15.02□□□□□ -0.01
USP6NL-205ENST00000609104 FERP16591 822 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 ZBTB9Q96C00 473 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 IKBKGQ9Y6K9 419 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 DNAAF4Q8WXU2 420 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 DDX23Q9BUQ8 820 aaKnown RBP15.01□□□□□ -0.01
USP6NL-205ENST00000609104 HSP90AA4PQ58FG1 418 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 KANK3Q6NY19 840 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 CCDC155Q8N6L0 562 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 RNF41Q9H4P4 317 aaPredicted RBP15.01□□□□□ -0.01
USP6NL-205ENST00000609104 PIP4K2BP78356 416 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 EHMT1Q9H9B1 1298 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 EHBP1L1Q8N3D4 1523 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 HAND2P61296 217 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 SLC26A6Q9BXS9 759 aa15.01□□□□□ -0.01
USP6NL-205ENST00000609104 GOLIM4O00461 696 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 MCM6Q14566 821 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 SYNJ2O15056 1496 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 GTF2A1P52655 376 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms