RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 TRIM44Q96DX7 344 aaPredicted RBP6.39□□□□□ -1.39
SSX9-202ENST00000608568 DDX27Q96GQ7 796 aaKnown RBP6.39□□□□□ -1.39
SSX9-202ENST00000608568 PNPLA7Q6ZV29 1317 aa6.39□□□□□ -1.39
SSX9-202ENST00000608568 PCNTO95613 3336 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 FRAT2O75474 233 aaPredicted RBP6.38□□□□□ -1.39
SSX9-202ENST00000608568 C7P10643 843 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 TMF1P82094 1093 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 MKRN3Q13064 507 aaKnown RBP6.38□□□□□ -1.39
SSX9-202ENST00000608568 HS1BP3Q53T59 392 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 SMIM5Q71RC9 77 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 FAM9BQ8IZU0 186 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 IPO4Q8TEX9 1081 aaKnown RBP6.38□□□□□ -1.39
SSX9-202ENST00000608568 SLC39A7Q92504 469 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 CRISPLD2Q9H0B8 497 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 MYH16Q9H6N6 1097 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 C1orf115Q9H7X2 142 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 STK32BQ9NY57 414 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 METRNQ9UJH8 293 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 COL11A2P13942 1736 aaPredicted RBP6.38□□□□□ -1.39
SSX9-202ENST00000608568 BCORQ6W2J9 1755 aa6.38□□□□□ -1.39
SSX9-202ENST00000608568 SCN7AQ01118 1682 aa6.37□□□□□ -1.39
SSX9-202ENST00000608568 KDM6AO15550 1401 aaPredicted RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 A0A0U1RQG5 324 aaPredicted RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 CYP27B1O15528 508 aa6.37□□□□□ -1.39
SSX9-202ENST00000608568 CANXP27824 592 aaKnown RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 MLLT3P42568 568 aaPredicted RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 PRIM1P49642 420 aaKnown RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 FLIIQ13045 1269 aa6.37□□□□□ -1.39
SSX9-202ENST00000608568 ANP32BQ92688 251 aaKnown RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 FAM163AQ96GL9 167 aaPredicted RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 GTPBP4Q9BZE4 634 aaKnown RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 FHDC1Q9C0D6 1143 aaPredicted RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 PPP1R1BQ9UD71 204 aaPredicted RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 DICER1Q9UPY3 1922 aaKnown RBP6.37□□□□□ -1.39
SSX9-202ENST00000608568 TIAM2Q8IVF5 1701 aa6.36□□□□□ -1.39
SSX9-202ENST00000608568 NRXN2Q9P2S2 1712 aa6.36□□□□□ -1.39
SSX9-202ENST00000608568 COL3A1P02461 1466 aaPredicted RBP6.36□□□□□ -1.39
SSX9-202ENST00000608568 PALLDQ8WX93 1383 aa6.36□□□□□ -1.39
SSX9-202ENST00000608568 MAP3K5Q99683 1374 aa6.36□□□□□ -1.39
SSX9-202ENST00000608568 APBB1O00213 710 aa6.36□□□□□ -1.39
SSX9-202ENST00000608568 HSPA5P11021 654 aaKnown RBP6.36□□□□□ -1.39
SSX9-202ENST00000608568 XRCC6P12956 609 aaKnown RBP eCLIP6.36□□□□□ -1.39
SSX9-202ENST00000608568 ZCRB1Q8TBF4 217 aaKnown RBP6.36□□□□□ -1.39
SSX9-202ENST00000608568 SYTL4Q96C24 671 aaPredicted RBP6.36□□□□□ -1.39
SSX9-202ENST00000608568 SCUBE2Q9NQ36 999 aa6.36□□□□□ -1.39
SSX9-202ENST00000608568 RCAN3Q9UKA8 241 aa6.36□□□□□ -1.39
SSX9-202ENST00000608568 ARFGEF2Q9Y6D5 1785 aa6.36□□□□□ -1.39
SSX9-202ENST00000608568 KDRP35968 1356 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 KIF24Q5T7B8 1368 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 DYNC1I1O14576 645 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 OFD1O75665 1012 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 LETM1O95202 739 aaPredicted RBP6.35□□□□□ -1.39
SSX9-202ENST00000608568 DMTNQ08495 405 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 MSL1Q68DK7 614 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 NLGN2Q8NFZ4 835 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 PHF12Q96QT6 1004 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 FAM117AQ9C073 453 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 MTFR1LQ9H019 292 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 LAMB4A4D0S4 1761 aa6.35□□□□□ -1.39
SSX9-202ENST00000608568 MRC1P22897 1456 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 PCDH11XQ9BZA7 1347 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 PCDH11YQ9BZA8 1340 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 DDX11L8A8MPP1 907 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 YY1P25490 414 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 MCM5P33992 734 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 CSPP1Q1MSJ5 1256 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 ASTLQ6HA08 431 aaPredicted RBP6.34□□□□□ -1.39
SSX9-202ENST00000608568 EYA1Q99502 592 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 SYT17Q9BSW7 474 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 POLR3GLQ9BT43 218 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 POLKQ9UBT6 870 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 KCPQ6ZWJ8 1503 aa6.34□□□□□ -1.39
SSX9-202ENST00000608568 KDM3BQ7LBC6 1761 aa6.34□□□□□ -1.4
SSX9-202ENST00000608568 KDM2BQ8NHM5 1336 aa6.33□□□□□ -1.4
SSX9-202ENST00000608568 TATP17735 454 aaPredicted RBP6.33□□□□□ -1.4
SSX9-202ENST00000608568 CCDC173Q0VFZ6 552 aa6.33□□□□□ -1.4
SSX9-202ENST00000608568 EIF4A2Q14240 407 aaKnown RBP6.33□□□□□ -1.4
SSX9-202ENST00000608568 SKOR2Q2VWA4 1001 aaPredicted RBP6.33□□□□□ -1.4
SSX9-202ENST00000608568 COL23A1Q86Y22 540 aaPredicted RBP6.33□□□□□ -1.4
SSX9-202ENST00000608568 CCNL1Q9UK58 526 aaPredicted RBP6.33□□□□□ -1.4
SSX9-202ENST00000608568 NUP98P52948 1817 aa6.33□□□□□ -1.4
SSX9-202ENST00000608568 FER1L6Q2WGJ9 1857 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 IBTKQ9P2D0 1353 aaPredicted RBP6.32□□□□□ -1.4
SSX9-202ENST00000608568 CGNL1Q0VF96 1302 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 IGSF1Q8N6C5 1336 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 RGS3P49796 1198 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 SLC20A2Q08357 652 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 ITPK1Q13572 414 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 RALBP1Q15311 655 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 C8orf34Q49A92 452 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 SLC27A3Q5K4L6 730 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
SSX9-202ENST00000608568 KIAA1211Q6ZU35 1233 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 ZSCAN30Q86W11 494 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 IFNL1Q8IU54 200 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 AEBP1Q8IUX7 1158 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 LINC00116Q8NCU8 138 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 EXOC6Q8TAG9 804 aa6.32□□□□□ -1.4
SSX9-202ENST00000608568 PNISRQ8TF01 805 aaKnown RBP6.32□□□□□ -1.4
SSX9-202ENST00000608568 RAPGEF4Q8WZA2 1011 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms