RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	SRGN	P10124	158 aa		28.15	■■■□□ 2.1
NECAB3-222	ENST00000607805	STYK1	Q6J9G0	422 aa		28.15	■■■□□ 2.1
NECAB3-222	ENST00000607805	NUP98	P52948	1817 aa		28.14	■■■□□ 2.1
NECAB3-222	ENST00000607805	PPP2R1A	P30153	589 aa		28.14	■■■□□ 2.1
NECAB3-222	ENST00000607805	CLEC4G	Q6UXB4	293 aa		28.14	■■■□□ 2.1
NECAB3-222	ENST00000607805	NUDC	Q9Y266	331 aa		28.14	■■■□□ 2.1
NECAB3-222	ENST00000607805	PIP4K2A	P48426	406 aa	Predicted RBP	28.13	■■■□□ 2.09
NECAB3-222	ENST00000607805	ZNF219	Q9P2Y4	722 aa	Predicted RBP	28.13	■■■□□ 2.09
NECAB3-222	ENST00000607805	KDM3B	Q7LBC6	1761 aa		28.13	■■■□□ 2.09
NECAB3-222	ENST00000607805	SNRPA1	P09661	255 aa	Known RBP	28.12	■■■□□ 2.09
NECAB3-222	ENST00000607805	MCM10	Q7L590	875 aa		28.12	■■■□□ 2.09
NECAB3-222	ENST00000607805	NPM2	Q86SE8	214 aa	Known RBP	28.12	■■■□□ 2.09
NECAB3-222	ENST00000607805	CNKSR1	Q969H4	720 aa		28.12	■■■□□ 2.09
NECAB3-222	ENST00000607805	SCN4A	P35499	1836 aa		28.11	■■■□□ 2.09
NECAB3-222	ENST00000607805	ST5	P78524	1137 aa		28.11	■■■□□ 2.09
NECAB3-222	ENST00000607805	ERFE	Q4G0M1	354 aa		28.11	■■■□□ 2.09
NECAB3-222	ENST00000607805	DPY19L2	Q6NUT2	758 aa		28.11	■■■□□ 2.09
NECAB3-222	ENST00000607805	MASTL	Q96GX5	879 aa		28.11	■■■□□ 2.09
NECAB3-222	ENST00000607805	NBPF26	B4DH59	902 aa		28.1	■■■□□ 2.09
NECAB3-222	ENST00000607805	HTATSF1	O43719	755 aa	Known RBP	28.1	■■■□□ 2.09
NECAB3-222	ENST00000607805	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.1	■■■□□ 2.09
NECAB3-222	ENST00000607805	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.1	■■■□□ 2.09	2e-6	■■□□□ 12.5
NECAB3-222	ENST00000607805	PRPF40B	Q6NWY9	871 aa	Known RBP	28.1	■■■□□ 2.09
NECAB3-222	ENST00000607805	NBPF10	Q6P3W6	841 aa	Known RBP	28.1	■■■□□ 2.09
NECAB3-222	ENST00000607805	NBPF15	Q8N660	670 aa		28.1	■■■□□ 2.09
NECAB3-222	ENST00000607805	C7orf43	Q8WVR3	580 aa		28.1	■■■□□ 2.09
NECAB3-222	ENST00000607805	KLRG2	A4D1S0	409 aa	Predicted RBP	28.09	■■■□□ 2.09
NECAB3-222	ENST00000607805	RGL2	O15211	777 aa		28.09	■■■□□ 2.09
NECAB3-222	ENST00000607805	TAOK3	Q9H2K8	898 aa		28.09	■■■□□ 2.09
NECAB3-222	ENST00000607805	RTF1	Q92541	710 aa	Known RBP	28.08	■■■□□ 2.09
NECAB3-222	ENST00000607805	DCTN1	Q14203	1278 aa		28.07	■■■□□ 2.08
NECAB3-222	ENST00000607805	SOGA3	Q5TF21	947 aa		28.06	■■■□□ 2.08
NECAB3-222	ENST00000607805	COL13A1	Q5TAT6	717 aa	Predicted RBP	28.05	■■■□□ 2.08
NECAB3-222	ENST00000607805	NBPF5P	Q86XG9	351 aa	Predicted RBP	28.05	■■■□□ 2.08
NECAB3-222	ENST00000607805	ZNF652	Q9Y2D9	606 aa		28.04	■■■□□ 2.08
NECAB3-222	ENST00000607805	NPHP1	O15259	732 aa		28.03	■■■□□ 2.08
NECAB3-222	ENST00000607805	DDN	O94850	711 aa	Predicted RBP	28.02	■■■□□ 2.08
NECAB3-222	ENST00000607805	TAF7	Q15545	349 aa	Predicted RBP	28.02	■■■□□ 2.08
NECAB3-222	ENST00000607805	NPR1	P16066	1061 aa		28.01	■■■□□ 2.07
NECAB3-222	ENST00000607805	TPTE2	Q6XPS3	522 aa		28	■■■□□ 2.07
NECAB3-222	ENST00000607805	NIP7	Q9Y221	180 aa	Known RBP eCLIP	28	■■■□□ 2.07
NECAB3-222	ENST00000607805	POTEI	P0CG38	1075 aa		27.99	■■■□□ 2.07
NECAB3-222	ENST00000607805	POTEJ	P0CG39	1038 aa		27.99	■■■□□ 2.07
NECAB3-222	ENST00000607805	HLF	Q16534	295 aa		27.99	■■■□□ 2.07
NECAB3-222	ENST00000607805	CCDC93	Q567U6	631 aa		27.98	■■■□□ 2.07
NECAB3-222	ENST00000607805	CHADL	Q6NUI6	762 aa		27.98	■■■□□ 2.07
NECAB3-222	ENST00000607805	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.98	■■■□□ 2.07
NECAB3-222	ENST00000607805	MIS18A	Q9NYP9	233 aa		27.98	■■■□□ 2.07
NECAB3-222	ENST00000607805	SNED1	Q8TER0	1413 aa		27.98	■■■□□ 2.07
NECAB3-222	ENST00000607805	ADAMTSL1	Q8N6G6	1762 aa		27.98	■■■□□ 2.07
NECAB3-222	ENST00000607805	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.95	■■■□□ 2.06	1e-6	■■■■■ 28.9
NECAB3-222	ENST00000607805	OLFM4	Q6UX06	510 aa		27.95	■■■□□ 2.06
NECAB3-222	ENST00000607805	PLEKHF1	Q96S99	279 aa		27.95	■■■□□ 2.06
NECAB3-222	ENST00000607805	CREBZF	Q9NS37	354 aa		27.93	■■■□□ 2.06
NECAB3-222	ENST00000607805	HSPA1A	P0DMV8	641 aa	Known RBP	27.92	■■■□□ 2.06
NECAB3-222	ENST00000607805	HSPA1B	P0DMV9	641 aa	Known RBP	27.92	■■■□□ 2.06
NECAB3-222	ENST00000607805	CRY2	Q49AN0	593 aa		27.92	■■■□□ 2.06
NECAB3-222	ENST00000607805	PASK	Q96RG2	1323 aa		27.92	■■■□□ 2.06
NECAB3-222	ENST00000607805	IQCA1L	A6NCM1	817 aa		27.91	■■■□□ 2.06
NECAB3-222	ENST00000607805	FAM177B	A6PVY3	158 aa		27.91	■■■□□ 2.06
NECAB3-222	ENST00000607805	ERVV-1	B6SEH8	477 aa		27.91	■■■□□ 2.06
NECAB3-222	ENST00000607805	EIF4A1	P60842	406 aa	Known RBP	27.91	■■■□□ 2.06
NECAB3-222	ENST00000607805	RTKN2	Q8IZC4	609 aa		27.91	■■■□□ 2.06
NECAB3-222	ENST00000607805	PNISR	Q8TF01	805 aa	Known RBP	27.91	■■■□□ 2.06
NECAB3-222	ENST00000607805	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.91	■■■□□ 2.06
NECAB3-222	ENST00000607805	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.91	■■■□□ 2.06
NECAB3-222	ENST00000607805	ZNF541	Q9H0D2	1346 aa		27.91	■■■□□ 2.06
NECAB3-222	ENST00000607805	ABCC12	Q96J65	1359 aa		27.9	■■■□□ 2.06
NECAB3-222	ENST00000607805	ALDH1B1	P30837	517 aa		27.9	■■■□□ 2.06
NECAB3-222	ENST00000607805	RIC1	Q4ADV7	1423 aa		27.9	■■■□□ 2.06
NECAB3-222	ENST00000607805	LDHD	Q86WU2	507 aa		27.89	■■■□□ 2.06
NECAB3-222	ENST00000607805	MAP3K15	Q6ZN16	1313 aa		27.89	■■■□□ 2.05
NECAB3-222	ENST00000607805	IBTK	Q9P2D0	1353 aa	Predicted RBP	27.87	■■■□□ 2.05
NECAB3-222	ENST00000607805	FZD9	O00144	591 aa		27.87	■■■□□ 2.05
NECAB3-222	ENST00000607805	NFE2L2	Q16236	605 aa		27.87	■■■□□ 2.05
NECAB3-222	ENST00000607805	TTLL7	Q6ZT98	887 aa		27.87	■■■□□ 2.05
NECAB3-222	ENST00000607805	COL4A5	P29400	1685 aa		27.87	■■■□□ 2.05
NECAB3-222	ENST00000607805	ITGBL1	O95965	494 aa	Predicted RBP	27.86	■■■□□ 2.05
NECAB3-222	ENST00000607805	PSMD1	Q99460	953 aa		27.86	■■■□□ 2.05
NECAB3-222	ENST00000607805	NYX	Q9GZU5	481 aa		27.86	■■■□□ 2.05
NECAB3-222	ENST00000607805	IARS	P41252	1262 aa	Known RBP	27.85	■■■□□ 2.05
NECAB3-222	ENST00000607805	NUTM1	Q86Y26	1132 aa		27.85	■■■□□ 2.05
NECAB3-222	ENST00000607805	TNS4	Q8IZW8	715 aa		27.85	■■■□□ 2.05
NECAB3-222	ENST00000607805	SYNE4	Q8N205	404 aa		27.85	■■■□□ 2.05
NECAB3-222	ENST00000607805	THUMPD2	Q9BTF0	503 aa	Known RBP	27.85	■■■□□ 2.05
NECAB3-222	ENST00000607805	UBN2	Q6ZU65	1347 aa		27.85	■■■□□ 2.05
NECAB3-222	ENST00000607805	ANKRD36C	Q5JPF3	1778 aa		27.84	■■■□□ 2.05
NECAB3-222	ENST00000607805	HOXA10	P31260	410 aa	Predicted RBP	27.84	■■■□□ 2.05
NECAB3-222	ENST00000607805	NGEF	Q8N5V2	710 aa		27.84	■■■□□ 2.05
NECAB3-222	ENST00000607805	LTBP1	Q14766	1721 aa		27.84	■■■□□ 2.05
NECAB3-222	ENST00000607805	LAMB2	P55268	1798 aa		27.83	■■■□□ 2.05
NECAB3-222	ENST00000607805	GTF2E1	P29083	439 aa	Predicted RBP	27.83	■■■□□ 2.05
NECAB3-222	ENST00000607805	MKRN1	Q9UHC7	482 aa	Known RBP	27.83	■■■□□ 2.05
NECAB3-222	ENST00000607805	RRP7A	Q9Y3A4	280 aa	Known RBP	27.83	■■■□□ 2.05
NECAB3-222	ENST00000607805	CNTNAP1	P78357	1384 aa		27.83	■■■□□ 2.05
NECAB3-222	ENST00000607805	NEFM	P07197	916 aa		27.82	■■■□□ 2.04
NECAB3-222	ENST00000607805	ZNF34	Q8IZ26	560 aa		27.82	■■■□□ 2.04
NECAB3-222	ENST00000607805	HACL1	Q9UJ83	578 aa		27.82	■■■□□ 2.04
NECAB3-222	ENST00000607805	LRP10	Q7Z4F1	713 aa		27.81	■■■□□ 2.04
NECAB3-222	ENST00000607805	SUSD4	Q5VX71	490 aa		27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms