RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 CAMTA2O94983 1202 aa27.63■■■□□ 2.01
NECAB3-221ENST00000607055 USPL1Q5W0Q7 1092 aa27.63■■■□□ 2.01
NECAB3-221ENST00000607055 MAP3K15Q6ZN16 1313 aa27.63■■■□□ 2.01
NECAB3-221ENST00000607055 CACNA1FO60840 1977 aa27.61■■■□□ 2.01
NECAB3-221ENST00000607055 DDX58O95786 925 aaKnown RBP27.61■■■□□ 2.01
NECAB3-221ENST00000607055 FKBP5Q13451 457 aaPredicted RBP27.61■■■□□ 2.01
NECAB3-221ENST00000607055 ANKRD13DQ6ZTN6 518 aa27.61■■■□□ 2.01
NECAB3-221ENST00000607055 PLBD2Q8NHP8 589 aa27.6■■■□□ 2.01
NECAB3-221ENST00000607055 BRPF1P55201 1214 aaPredicted RBP27.59■■■□□ 2.01
NECAB3-221ENST00000607055 HLFQ16534 295 aa27.59■■■□□ 2.01
NECAB3-221ENST00000607055 RIC3Q7Z5B4 369 aa27.59■■■□□ 2.01
NECAB3-221ENST00000607055 BCL2L12Q9HB09 334 aa27.59■■■□□ 2.01
NECAB3-221ENST00000607055 NOB1Q9ULX3 412 aaKnown RBP27.59■■■□□ 2.01
NECAB3-221ENST00000607055 KIF16BQ96L93 1317 aa27.59■■■□□ 2.01
NECAB3-221ENST00000607055 SCN7AQ01118 1682 aa27.59■■■□□ 2.01
NECAB3-221ENST00000607055 ERVV-1B6SEH8 477 aa27.58■■■□□ 2.01
NECAB3-221ENST00000607055 GYS1P13807 737 aa27.58■■■□□ 2.01
NECAB3-221ENST00000607055 FRAT1Q92837 279 aaPredicted RBP27.58■■■□□ 2.01
NECAB3-221ENST00000607055 BCORQ6W2J9 1755 aa27.58■■■□□ 2
NECAB3-221ENST00000607055 PI4KAP2A4QPH2 592 aa27.57■■■□□ 2
NECAB3-221ENST00000607055 KSR2Q6VAB6 950 aa27.57■■■□□ 2
NECAB3-221ENST00000607055 PI4KAP1Q8N8J0 262 aa27.57■■■□□ 2
NECAB3-221ENST00000607055 ZNF652Q9Y2D9 606 aa27.57■■■□□ 2
NECAB3-221ENST00000607055 CASZ1Q86V15 1759 aa27.57■■■□□ 2
NECAB3-221ENST00000607055 FKBP8Q14318 412 aa27.56■■■□□ 2
NECAB3-221ENST00000607055 MSL1Q68DK7 614 aa27.56■■■□□ 2
NECAB3-221ENST00000607055 MAP3K2Q9Y2U5 619 aa27.56■■■□□ 2
NECAB3-221ENST00000607055 PTPRCP08575 1304 aa27.56■■■□□ 2
NECAB3-221ENST00000607055 ADCY9O60503 1353 aa27.56■■■□□ 2
NECAB3-221ENST00000607055 GIGYF2Q6Y7W6 1299 aaKnown RBP27.55■■■□□ 2
NECAB3-221ENST00000607055 SLC16A10Q8TF71 515 aa27.55■■■□□ 2
NECAB3-221ENST00000607055 ZBTB7AO95365 584 aa27.54■■■□□ 2
NECAB3-221ENST00000607055 F6X3S4 739 aa27.53■■■□□ 2
NECAB3-221ENST00000607055 CLEC4GQ6UXB4 293 aa27.53■■■□□ 2
NECAB3-221ENST00000607055 RGL2O15211 777 aa27.52■■■□□ 2
NECAB3-221ENST00000607055 IPO8O15397 1037 aaKnown RBP27.52■■■□□ 2
NECAB3-221ENST00000607055 TBC1D9BQ66K14 1250 aa27.52■■■□□ 2
NECAB3-221ENST00000607055 BICDL1Q6ZP65 573 aa27.52■■■□□ 2
NECAB3-221ENST00000607055 NLGN1Q8N2Q7 840 aa27.52■■■□□ 2
NECAB3-221ENST00000607055 DNAAF4Q8WXU2 420 aa27.52■■■□□ 2
NECAB3-221ENST00000607055 ARFGEF2Q9Y6D5 1785 aa27.52■■■□□ 2
NECAB3-221ENST00000607055 MYD88Q99836 296 aa27.51■■□□□ 1.99
NECAB3-221ENST00000607055 API5Q9BZZ5 524 aaKnown RBP27.51■■□□□ 1.99
NECAB3-221ENST00000607055 TCIRG1Q13488 830 aa27.5■■□□□ 1.99
NECAB3-221ENST00000607055 HSP90AB3PQ58FF7 597 aa27.5■■□□□ 1.99
NECAB3-221ENST00000607055 ZKSCAN2Q63HK3 967 aa27.5■■□□□ 1.99
NECAB3-221ENST00000607055 ARHGAP45Q92619 1136 aa27.5■■□□□ 1.99
NECAB3-221ENST00000607055 METTL22Q9BUU2 404 aaPredicted RBP27.5■■□□□ 1.99
NECAB3-221ENST00000607055 MTFR1LQ9H019 292 aa27.5■■□□□ 1.99
NECAB3-221ENST00000607055 NUP98P52948 1817 aa27.49■■□□□ 1.99
NECAB3-221ENST00000607055 GPTP24298 496 aa27.49■■□□□ 1.99
NECAB3-221ENST00000607055 NFIXQ14938 502 aa27.49■■□□□ 1.99
NECAB3-221ENST00000607055 SLC4A10Q6U841 1118 aa27.49■■□□□ 1.99
NECAB3-221ENST00000607055 NIP7Q9Y221 180 aaKnown RBP eCLIP27.49■■□□□ 1.99
NECAB3-221ENST00000607055 ATF5Q9Y2D1 282 aaPredicted RBP27.49■■□□□ 1.99
NECAB3-221ENST00000607055 ATP10DQ9P241 1426 aa27.49■■□□□ 1.99
NECAB3-221ENST00000607055 ATP5J2-PTCD1G3V325 749 aa27.48■■□□□ 1.99
NECAB3-221ENST00000607055 TRIM27P14373 513 aa27.47■■□□□ 1.99
NECAB3-221ENST00000607055 NEXNQ0ZGT2 675 aa27.47■■□□□ 1.99
NECAB3-221ENST00000607055 ATF7IPQ6VMQ6 1270 aa27.47■■□□□ 1.99
NECAB3-221ENST00000607055 TNNQ9UQP3 1299 aa27.47■■□□□ 1.99
NECAB3-221ENST00000607055 PLIN1O60240 522 aa27.46■■□□□ 1.99
NECAB3-221ENST00000607055 ZNF34Q8IZ26 560 aa27.46■■□□□ 1.99
NECAB3-221ENST00000607055 SETDB2Q96T68 719 aa27.46■■□□□ 1.99
NECAB3-221ENST00000607055 MMP10P09238 476 aa27.45■■□□□ 1.98
NECAB3-221ENST00000607055 TM4SF1P30408 202 aa27.45■■□□□ 1.98
NECAB3-221ENST00000607055 ISCA1Q9BUE6 129 aa27.45■■□□□ 1.98
NECAB3-221ENST00000607055 UBN2Q6ZU65 1347 aa27.44■■□□□ 1.98
NECAB3-221ENST00000607055 CENPBP07199 599 aaPredicted RBP27.44■■□□□ 1.98
NECAB3-221ENST00000607055 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.44■■□□□ 1.98
NECAB3-221ENST00000607055 CLUAP1Q96AJ1 413 aa27.44■■□□□ 1.98
NECAB3-221ENST00000607055 ANKRD36CQ5JPF3 1778 aa27.43■■□□□ 1.98
NECAB3-221ENST00000607055 FAM177BA6PVY3 158 aa27.43■■□□□ 1.98
NECAB3-221ENST00000607055 IGKV5-2P06315 115 aa27.43■■□□□ 1.98
NECAB3-221ENST00000607055 DDR1Q08345 913 aa27.43■■□□□ 1.98
NECAB3-221ENST00000607055 CWF19L2Q2TBE0 894 aaKnown RBP27.42■■□□□ 1.98
NECAB3-221ENST00000607055 BEND3Q5T5X7 828 aa27.42■■□□□ 1.98
NECAB3-221ENST00000607055 NLRP10Q86W26 655 aa27.42■■□□□ 1.98
NECAB3-221ENST00000607055 LINS1Q8NG48 757 aa27.42■■□□□ 1.98
NECAB3-221ENST00000607055 PARP3Q9Y6F1 533 aa27.42■■□□□ 1.98
NECAB3-221ENST00000607055 CARMIL3Q8ND23 1372 aa27.42■■□□□ 1.98
NECAB3-221ENST00000607055 POLRMTO00411 1230 aaKnown RBP27.41■■□□□ 1.98
NECAB3-221ENST00000607055 PARP10Q53GL7 1025 aa27.41■■□□□ 1.98
NECAB3-221ENST00000607055 ABCC4O15439 1325 aa27.41■■□□□ 1.98
NECAB3-221ENST00000607055 PXDNLA1KZ92 1463 aa27.4■■□□□ 1.98
NECAB3-221ENST00000607055 NEURL1BA8MQ27 555 aa27.4■■□□□ 1.98
NECAB3-221ENST00000607055 POLD1P28340 1107 aa27.4■■□□□ 1.98
NECAB3-221ENST00000607055 RRP1P56182 461 aaKnown RBP27.4■■□□□ 1.98
NECAB3-221ENST00000607055 TRIM28Q13263 835 aaKnown RBP27.4■■□□□ 1.98
NECAB3-221ENST00000607055 SUSD4Q5VX71 490 aa27.4■■□□□ 1.98
NECAB3-221ENST00000607055 FTSJ3Q8IY81 847 aaKnown RBP27.4■■□□□ 1.98
NECAB3-221ENST00000607055 SRCIN1Q9C0H9 1055 aa27.4■■□□□ 1.98
NECAB3-221ENST00000607055 SPON1Q9HCB6 807 aa27.4■■□□□ 1.98
NECAB3-221ENST00000607055 SERPINB2P05120 415 aa27.39■■□□□ 1.98
NECAB3-221ENST00000607055 DZIP1LQ8IYY4 767 aaKnown RBP27.39■■□□□ 1.98
NECAB3-221ENST00000607055 CWC25Q9NXE8 425 aaPredicted RBP27.39■■□□□ 1.98
NECAB3-221ENST00000607055 NBPF5PQ86XG9 351 aaPredicted RBP27.38■■□□□ 1.97
NECAB3-221ENST00000607055 CCDC191Q8NCU4 936 aa27.38■■□□□ 1.97
NECAB3-221ENST00000607055 SUPT16HQ9Y5B9 1047 aaKnown RBP27.38■■□□□ 1.97
NECAB3-221ENST00000607055 ALDH1L1O75891 902 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 716.5 ms