RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 CHADLQ6NUI6 762 aa24.78■■□□□ 1.56
NECAB3-220ENST00000606699 PRPF40BQ6NWY9 871 aaKnown RBP24.78■■□□□ 1.56
NECAB3-220ENST00000606699 CREBZFQ9NS37 354 aa24.78■■□□□ 1.56
NECAB3-220ENST00000606699 FER1L6Q2WGJ9 1857 aa24.78■■□□□ 1.56
NECAB3-220ENST00000606699 SIPA1L3O60292 1781 aaPredicted RBP24.76■■□□□ 1.55
NECAB3-220ENST00000606699 RGL2O15211 777 aa24.76■■□□□ 1.55
NECAB3-220ENST00000606699 PHACTR3Q96KR7 559 aa24.76■■□□□ 1.55
NECAB3-220ENST00000606699 ZNF652Q9Y2D9 606 aa24.76■■□□□ 1.55
NECAB3-220ENST00000606699 USP16Q9Y5T5 823 aa24.76■■□□□ 1.55
NECAB3-220ENST00000606699 DICER1Q9UPY3 1922 aaKnown RBP24.76■■□□□ 1.55
NECAB3-220ENST00000606699 KCNQ3O43525 872 aa24.75■■□□□ 1.55
NECAB3-220ENST00000606699 DDNO94850 711 aaPredicted RBP24.75■■□□□ 1.55
NECAB3-220ENST00000606699 CFAP53Q96M91 514 aa24.75■■□□□ 1.55
NECAB3-220ENST00000606699 IQCA1LA6NCM1 817 aa24.74■■□□□ 1.55
NECAB3-220ENST00000606699 SNRPA1P09661 255 aaKnown RBP24.74■■□□□ 1.55
NECAB3-220ENST00000606699 PRKAR2BP31323 418 aa24.74■■□□□ 1.55
NECAB3-220ENST00000606699 NBPF5PQ86XG9 351 aaPredicted RBP24.74■■□□□ 1.55
NECAB3-220ENST00000606699 C7orf43Q8WVR3 580 aa24.74■■□□□ 1.55
NECAB3-220ENST00000606699 RSPH6AQ9H0K4 717 aa24.74■■□□□ 1.55
NECAB3-220ENST00000606699 COL11A2P13942 1736 aaPredicted RBP24.73■■□□□ 1.55
NECAB3-220ENST00000606699 KLRG2A4D1S0 409 aaPredicted RBP24.73■■□□□ 1.55
NECAB3-220ENST00000606699 NUDCQ9Y266 331 aa24.73■■□□□ 1.55
NECAB3-220ENST00000606699 NPR1P16066 1061 aa24.72■■□□□ 1.55
NECAB3-220ENST00000606699 RTF1Q92541 710 aaKnown RBP24.72■■□□□ 1.55
NECAB3-220ENST00000606699 L3MBTL3Q96JM7 780 aaPredicted RBP24.72■■□□□ 1.55
NECAB3-220ENST00000606699 CCDC93Q567U6 631 aa24.71■■□□□ 1.55
NECAB3-220ENST00000606699 TPTE2Q6XPS3 522 aa24.71■■□□□ 1.55
NECAB3-220ENST00000606699 SLX4Q8IY92 1834 aa24.7■■□□□ 1.55
NECAB3-220ENST00000606699 CAPN15O75808 1086 aa24.7■■□□□ 1.54
NECAB3-220ENST00000606699 CNGB1Q14028 1251 aaPredicted RBP24.7■■□□□ 1.54
NECAB3-220ENST00000606699 LDHDQ86WU2 507 aa24.7■■□□□ 1.54
NECAB3-220ENST00000606699 HTATSF1O43719 755 aaKnown RBP24.68■■□□□ 1.54
NECAB3-220ENST00000606699 POTEIP0CG38 1075 aa24.68■■□□□ 1.54
NECAB3-220ENST00000606699 POTEJP0CG39 1038 aa24.68■■□□□ 1.54
NECAB3-220ENST00000606699 FKBP4Q02790 459 aaKnown RBP eCLIP24.68■■□□□ 1.541e-6■■■■■ 28.9
NECAB3-220ENST00000606699 RTKN2Q8IZC4 609 aa24.68■■□□□ 1.54
NECAB3-220ENST00000606699 PIP4K2AP48426 406 aaPredicted RBP24.67■■□□□ 1.54
NECAB3-220ENST00000606699 TAF1DQ9H5J8 278 aaPredicted RBP24.67■■□□□ 1.54
NECAB3-220ENST00000606699 BCORQ6W2J9 1755 aa24.67■■□□□ 1.54
NECAB3-220ENST00000606699 PASKQ96RG2 1323 aa24.66■■□□□ 1.54
NECAB3-220ENST00000606699 PRAMEF22A3QJZ6 481 aa24.66■■□□□ 1.54
NECAB3-220ENST00000606699 MKRN1Q9UHC7 482 aaKnown RBP24.66■■□□□ 1.54
NECAB3-220ENST00000606699 NIP7Q9Y221 180 aaKnown RBP eCLIP24.66■■□□□ 1.54
NECAB3-220ENST00000606699 ARFGEF2Q9Y6D5 1785 aa24.66■■□□□ 1.54
NECAB3-220ENST00000606699 ALDH1B1P30837 517 aa24.65■■□□□ 1.54
NECAB3-220ENST00000606699 MCM10Q7L590 875 aa24.65■■□□□ 1.54
NECAB3-220ENST00000606699 U2AF1L5P0DN76 240 aaPredicted RBP24.64■■□□□ 1.54
NECAB3-220ENST00000606699 U2AF1Q01081 240 aaKnown RBP eCLIP24.64■■□□□ 1.54
NECAB3-220ENST00000606699 CNTNAP1P78357 1384 aa24.64■■□□□ 1.53
NECAB3-220ENST00000606699 NBPF26B4DH59 902 aa24.63■■□□□ 1.53
NECAB3-220ENST00000606699 NBPF10Q6P3W6 841 aaKnown RBP24.63■■□□□ 1.53
NECAB3-220ENST00000606699 NBPF15Q8N660 670 aa24.63■■□□□ 1.53
NECAB3-220ENST00000606699 TAF7Q15545 349 aaPredicted RBP24.62■■□□□ 1.53
NECAB3-220ENST00000606699 ZNF277Q9NRM2 450 aaPredicted RBP24.62■■□□□ 1.53
NECAB3-220ENST00000606699 HACL1Q9UJ83 578 aa24.62■■□□□ 1.53
NECAB3-220ENST00000606699 SCN4AP35499 1836 aa24.62■■□□□ 1.53
NECAB3-220ENST00000606699 TMEM88BA6NKF7 163 aa24.61■■□□□ 1.53
NECAB3-220ENST00000606699 ITGBL1O95965 494 aaPredicted RBP24.61■■□□□ 1.53
NECAB3-220ENST00000606699 PNMA8AQ86V59 439 aaPredicted RBP24.61■■□□□ 1.53
NECAB3-220ENST00000606699 FZD9O00144 591 aa24.6■■□□□ 1.53
NECAB3-220ENST00000606699 GTF2E1P29083 439 aaPredicted RBP24.6■■□□□ 1.53
NECAB3-220ENST00000606699 PPP2R1AP30153 589 aa24.58■■□□□ 1.53
NECAB3-220ENST00000606699 EPHX2P34913 555 aa24.58■■□□□ 1.53
NECAB3-220ENST00000606699 IARSP41252 1262 aaKnown RBP24.58■■□□□ 1.53
NECAB3-220ENST00000606699 DCTN1Q14203 1278 aa24.58■■□□□ 1.53
NECAB3-220ENST00000606699 HLFQ16534 295 aa24.58■■□□□ 1.53
NECAB3-220ENST00000606699 EAPPQ56P03 285 aaPredicted RBP24.58■■□□□ 1.53
NECAB3-220ENST00000606699 SYNE4Q8N205 404 aa24.58■■□□□ 1.53
NECAB3-220ENST00000606699 PSMD1Q99460 953 aa24.58■■□□□ 1.53
NECAB3-220ENST00000606699 NYXQ9GZU5 481 aa24.58■■□□□ 1.53
NECAB3-220ENST00000606699 PRDM10Q9NQV6 1147 aa24.58■■□□□ 1.53
NECAB3-220ENST00000606699 ZNF541Q9H0D2 1346 aa24.58■■□□□ 1.52
NECAB3-220ENST00000606699 CACNA1SQ13698 1873 aa24.58■■□□□ 1.52
NECAB3-220ENST00000606699 ERVV-1B6SEH8 477 aa24.57■■□□□ 1.52
NECAB3-220ENST00000606699 CRY2Q49AN0 593 aa24.57■■□□□ 1.52
NECAB3-220ENST00000606699 CC2D2BQ6DHV5 1058 aa24.57■■□□□ 1.52
NECAB3-220ENST00000606699 FAM177BA6PVY3 158 aa24.56■■□□□ 1.52
NECAB3-220ENST00000606699 FOXN1O15353 648 aa24.56■■□□□ 1.52
NECAB3-220ENST00000606699 GRIPAP1Q4V328 841 aa24.56■■□□□ 1.52
NECAB3-220ENST00000606699 OLFM4Q6UX06 510 aa24.56■■□□□ 1.52
NECAB3-220ENST00000606699 GPC2Q8N158 579 aa24.56■■□□□ 1.52
NECAB3-220ENST00000606699 PNISRQ8TF01 805 aaKnown RBP24.56■■□□□ 1.52
NECAB3-220ENST00000606699 CLEC11AQ9Y240 323 aa24.56■■□□□ 1.52
NECAB3-220ENST00000606699 VEGFBP49765 207 aa24.55■■□□□ 1.52
NECAB3-220ENST00000606699 JDP2Q8WYK2 163 aa24.55■■□□□ 1.52
NECAB3-220ENST00000606699 AIDAQ96BJ3 306 aa24.55■■□□□ 1.52
NECAB3-220ENST00000606699 CTCFP49711 727 aaPredicted RBP24.54■■□□□ 1.52
NECAB3-220ENST00000606699 CNTROBQ8N137 903 aa24.53■■□□□ 1.52
NECAB3-220ENST00000606699 NEFMP07197 916 aa24.52■■□□□ 1.52
NECAB3-220ENST00000606699 RNF123Q5XPI4 1314 aa24.52■■□□□ 1.52
NECAB3-220ENST00000606699 RASSF10A6NK89 507 aa24.51■■□□□ 1.51
NECAB3-220ENST00000606699 HOXA10P31260 410 aaPredicted RBP24.51■■□□□ 1.51
NECAB3-220ENST00000606699 WBP1LQ9NX94 342 aa24.51■■□□□ 1.51
NECAB3-220ENST00000606699 MIS18AQ9NYP9 233 aa24.51■■□□□ 1.51
NECAB3-220ENST00000606699 MAP3K15Q6ZN16 1313 aa24.51■■□□□ 1.51
NECAB3-220ENST00000606699 SNED1Q8TER0 1413 aa24.51■■□□□ 1.51
NECAB3-220ENST00000606699 EIF6P56537 245 aaKnown RBP24.5■■□□□ 1.51
NECAB3-220ENST00000606699 DEFB115Q30KQ5 88 aa24.5■■□□□ 1.51
NECAB3-220ENST00000606699 MAP1SQ66K74 1059 aaPredicted RBP24.49■■□□□ 1.51
NECAB3-220ENST00000606699 KIF6Q6ZMV9 814 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms