RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ARHGEF1Q92888 912 aaKnown RBP9.82□□□□□ -0.84
MSH6-211ENST00000606499 ARXQ96QS3 562 aa9.82□□□□□ -0.84
MSH6-211ENST00000606499 ZBTB3Q9H5J0 574 aa9.82□□□□□ -0.84
MSH6-211ENST00000606499 SRP68Q9UHB9 627 aaKnown RBP9.82□□□□□ -0.84
MSH6-211ENST00000606499 TNNQ9UQP3 1299 aa9.82□□□□□ -0.84
MSH6-211ENST00000606499 USP42Q9H9J4 1324 aaKnown RBP9.82□□□□□ -0.84
MSH6-211ENST00000606499 CENPBP07199 599 aaPredicted RBP9.81□□□□□ -0.84
MSH6-211ENST00000606499 HMGB2P26583 209 aaKnown RBP9.81□□□□□ -0.84
MSH6-211ENST00000606499 R3HDM1Q15032 1099 aaKnown RBP9.81□□□□□ -0.84
MSH6-211ENST00000606499 TRAPPC3LQ5T215 181 aa9.81□□□□□ -0.84
MSH6-211ENST00000606499 KIF6Q6ZMV9 814 aa9.81□□□□□ -0.84
MSH6-211ENST00000606499 NPM2Q86SE8 214 aaKnown RBP9.81□□□□□ -0.84
MSH6-211ENST00000606499 COL23A1Q86Y22 540 aaPredicted RBP9.81□□□□□ -0.84
MSH6-211ENST00000606499 PDGFDQ9GZP0 370 aaPredicted RBP9.81□□□□□ -0.84
MSH6-211ENST00000606499 NOB1Q9ULX3 412 aaKnown RBP9.81□□□□□ -0.84
MSH6-211ENST00000606499 MAP3K15Q6ZN16 1313 aa9.81□□□□□ -0.84
MSH6-211ENST00000606499 PXDNLA1KZ92 1463 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 A0A087WZG4 1122 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 PI4KAP2A4QPH2 592 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 PSDA5PKW4 1024 aaPredicted RBP9.8□□□□□ -0.84
MSH6-211ENST00000606499 F6X3S4 739 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 PLIN1O60240 522 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 CAMTA2O94983 1202 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 RFC4P35249 363 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 BRPF1P55201 1214 aaPredicted RBP9.8□□□□□ -0.84
MSH6-211ENST00000606499 USPL1Q5W0Q7 1092 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 PI4KAP1Q8N8J0 262 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 PTPRCP08575 1304 aa9.8□□□□□ -0.84
MSH6-211ENST00000606499 SRCAPQ6ZRS2 3230 aa9.79□□□□□ -0.84
MSH6-211ENST00000606499 DDX58O95786 925 aaKnown RBP9.79□□□□□ -0.84
MSH6-211ENST00000606499 HLFQ16534 295 aa9.79□□□□□ -0.84
MSH6-211ENST00000606499 ANKRD13DQ6ZTN6 518 aa9.79□□□□□ -0.84
MSH6-211ENST00000606499 PLBD2Q8NHP8 589 aa9.79□□□□□ -0.84
MSH6-211ENST00000606499 BCL2L12Q9HB09 334 aa9.79□□□□□ -0.84
MSH6-211ENST00000606499 NARFQ9UHQ1 456 aa9.79□□□□□ -0.84
MSH6-211ENST00000606499 MAP3K2Q9Y2U5 619 aa9.79□□□□□ -0.84
MSH6-211ENST00000606499 ATP10DQ9P241 1426 aa9.79□□□□□ -0.84
MSH6-211ENST00000606499 LAMB2P55268 1798 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 ZPR1O75312 459 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 GYS1P13807 737 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 TRIM27P14373 513 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 RRP1P56182 461 aaKnown RBP9.78□□□□□ -0.84
MSH6-211ENST00000606499 ZKSCAN2Q63HK3 967 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 KSR2Q6VAB6 950 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 ATF7IPQ6VMQ6 1270 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 RIC3Q7Z5B4 369 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 FLAD1Q8NFF5 587 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 SUPT16HQ9Y5B9 1047 aaKnown RBP9.78□□□□□ -0.84
MSH6-211ENST00000606499 ABCC4O15439 1325 aa9.78□□□□□ -0.84
MSH6-211ENST00000606499 DDX60Q8IY21 1712 aaKnown RBP9.77□□□□□ -0.85
MSH6-211ENST00000606499 NRXN2Q9P2S2 1712 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 ERVV-1B6SEH8 477 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 IPO8O15397 1037 aaKnown RBP9.77□□□□□ -0.85
MSH6-211ENST00000606499 RLBP1P12271 317 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 GPTP24298 496 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 FKBP8Q14318 412 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 C20orf194Q5TEA3 1177 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 MSL1Q68DK7 614 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 SLC4A10Q6U841 1118 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 GIGYF2Q6Y7W6 1299 aaKnown RBP9.77□□□□□ -0.85
MSH6-211ENST00000606499 DNAAF4Q8WXU2 420 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 ARHGAP45Q92619 1136 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 MYD88Q99836 296 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.85
MSH6-211ENST00000606499 UBN2Q6ZU65 1347 aa9.77□□□□□ -0.85
MSH6-211ENST00000606499 TNRC6CQ9HCJ0 1690 aaKnown RBP9.77□□□□□ -0.85
MSH6-211ENST00000606499 ATP5J2-PTCD1G3V325 749 aa9.76□□□□□ -0.85
MSH6-211ENST00000606499 IGKV5-2P06315 115 aa9.76□□□□□ -0.85
MSH6-211ENST00000606499 CWF19L2Q2TBE0 894 aaKnown RBP9.76□□□□□ -0.85
MSH6-211ENST00000606499 TBC1D9BQ66K14 1250 aa9.76□□□□□ -0.85
MSH6-211ENST00000606499 PANK1Q8TE04 598 aa9.76□□□□□ -0.85
MSH6-211ENST00000606499 METTL22Q9BUU2 404 aaPredicted RBP9.76□□□□□ -0.85
MSH6-211ENST00000606499 ZNF652Q9Y2D9 606 aa9.76□□□□□ -0.85
MSH6-211ENST00000606499 RNF123Q5XPI4 1314 aa9.76□□□□□ -0.85
MSH6-211ENST00000606499 ZBTB7AO95365 584 aa9.75□□□□□ -0.85
MSH6-211ENST00000606499 TCIRG1Q13488 830 aa9.75□□□□□ -0.85
MSH6-211ENST00000606499 BEND3Q5T5X7 828 aa9.75□□□□□ -0.85
MSH6-211ENST00000606499 CLEC4GQ6UXB4 293 aa9.75□□□□□ -0.85
MSH6-211ENST00000606499 BICDL1Q6ZP65 573 aa9.75□□□□□ -0.85
MSH6-211ENST00000606499 FTSJ3Q8IY81 847 aaKnown RBP9.75□□□□□ -0.85
MSH6-211ENST00000606499 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
MSH6-211ENST00000606499 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.75□□□□□ -0.85
MSH6-211ENST00000606499 CARMIL3Q8ND23 1372 aa9.75□□□□□ -0.85
MSH6-211ENST00000606499 ANKRD31Q8N7Z5 1873 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 FAM177BA6PVY3 158 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 RGL2O15211 777 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 DDR1Q08345 913 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 NEXNQ0ZGT2 675 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 NFIXQ14938 502 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 HSP90AB3PQ58FF7 597 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 ZNF34Q8IZ26 560 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 TMEM57Q8N5G2 664 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 LINS1Q8NG48 757 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 CNKSR2Q8WXI2 1034 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 ISCA1Q9BUE6 129 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 SRCIN1Q9C0H9 1055 aa9.74□□□□□ -0.85
MSH6-211ENST00000606499 NIP7Q9Y221 180 aaKnown RBP eCLIP9.74□□□□□ -0.85
MSH6-211ENST00000606499 COL11A2P13942 1736 aaPredicted RBP9.73□□□□□ -0.85
MSH6-211ENST00000606499 GOLGB1Q14789 3259 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms