RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 ADCY9O60503 1353 aa23.49■■□□□ 1.35
SSBP4-212ENST00000601919 NEXNQ0ZGT2 675 aa23.48■■□□□ 1.35
SSBP4-212ENST00000601919 ATP10DQ9P241 1426 aa23.48■■□□□ 1.35
SSBP4-212ENST00000601919 A0A087WZG4 1122 aa23.47■■□□□ 1.35
SSBP4-212ENST00000601919 C4BP0C0L5 1744 aa23.47■■□□□ 1.35
SSBP4-212ENST00000601919 ARFGEF2Q9Y6D5 1785 aa23.47■■□□□ 1.35
SSBP4-212ENST00000601919 EIF5P55010 431 aaKnown RBP23.46■■□□□ 1.35
SSBP4-212ENST00000601919 KCNQ4P56696 695 aa23.46■■□□□ 1.35
SSBP4-212ENST00000601919 TXNRD1Q16881 649 aa23.46■■□□□ 1.35
SSBP4-212ENST00000601919 SRCIN1Q9C0H9 1055 aa23.46■■□□□ 1.35
SSBP4-212ENST00000601919 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
SSBP4-212ENST00000601919 METTL22Q9BUU2 404 aaPredicted RBP23.45■■□□□ 1.34
SSBP4-212ENST00000601919 PPP4R2Q9NY27 417 aa23.45■■□□□ 1.34
SSBP4-212ENST00000601919 ALDH1L1O75891 902 aa23.44■■□□□ 1.34
SSBP4-212ENST00000601919 TTLL7Q6ZT98 887 aa23.44■■□□□ 1.34
SSBP4-212ENST00000601919 AK7Q96M32 723 aa23.44■■□□□ 1.34
SSBP4-212ENST00000601919 ARXQ96QS3 562 aa23.44■■□□□ 1.34
SSBP4-212ENST00000601919 MAP3K15Q6ZN16 1313 aa23.43■■□□□ 1.34
SSBP4-212ENST00000601919 ERVV-1B6SEH8 477 aa23.43■■□□□ 1.34
SSBP4-212ENST00000601919 RPS6KA4O75676 772 aa23.43■■□□□ 1.34
SSBP4-212ENST00000601919 BEND3Q5T5X7 828 aa23.43■■□□□ 1.34
SSBP4-212ENST00000601919 CCDC125Q86Z20 511 aa23.43■■□□□ 1.34
SSBP4-212ENST00000601919 LINS1Q8NG48 757 aa23.43■■□□□ 1.34
SSBP4-212ENST00000601919 LRRC4BQ9NT99 713 aa23.43■■□□□ 1.34
SSBP4-212ENST00000601919 RTCBQ9Y3I0 505 aaKnown RBP23.43■■□□□ 1.34
SSBP4-212ENST00000601919 COL15A1P39059 1388 aa23.42■■□□□ 1.34
SSBP4-212ENST00000601919 GNPATO15228 680 aa23.42■■□□□ 1.34
SSBP4-212ENST00000601919 DZIP3Q86Y13 1208 aaKnown RBP23.42■■□□□ 1.34
SSBP4-212ENST00000601919 IBTKQ9P2D0 1353 aaPredicted RBP23.41■■□□□ 1.34
SSBP4-212ENST00000601919 ZBTB7BO15156 539 aaPredicted RBP23.41■■□□□ 1.34
SSBP4-212ENST00000601919 BAG6P46379 1132 aa23.41■■□□□ 1.34
SSBP4-212ENST00000601919 HSP90AB3PQ58FF7 597 aa23.41■■□□□ 1.34
SSBP4-212ENST00000601919 ZBTB3Q9H5J0 574 aa23.41■■□□□ 1.34
SSBP4-212ENST00000601919 MYD88Q99836 296 aa23.4■■□□□ 1.34
SSBP4-212ENST00000601919 AFDNP55196 1824 aaKnown RBP23.4■■□□□ 1.34
SSBP4-212ENST00000601919 EP400Q96L91 3159 aa23.4■■□□□ 1.34
SSBP4-212ENST00000601919 GNAI3P08754 354 aa23.39■■□□□ 1.33
SSBP4-212ENST00000601919 ADRA2BP18089 450 aa23.39■■□□□ 1.33
SSBP4-212ENST00000601919 PROM2Q8N271 834 aa23.39■■□□□ 1.33
SSBP4-212ENST00000601919 ZBTB40Q9NUA8 1239 aa23.39■■□□□ 1.33
SSBP4-212ENST00000601919 HDAC5Q9UQL6 1122 aa23.39■■□□□ 1.33
SSBP4-212ENST00000601919 RGL2O15211 777 aa23.38■■□□□ 1.33
SSBP4-212ENST00000601919 GIGYF2Q6Y7W6 1299 aaKnown RBP23.38■■□□□ 1.33
SSBP4-212ENST00000601919 TBC1D2BQ9UPU7 963 aa23.38■■□□□ 1.33
SSBP4-212ENST00000601919 ZNF652Q9Y2D9 606 aa23.38■■□□□ 1.33
SSBP4-212ENST00000601919 NUP98P52948 1817 aa23.38■■□□□ 1.33
SSBP4-212ENST00000601919 TCIRG1Q13488 830 aa23.37■■□□□ 1.33
SSBP4-212ENST00000601919 ANKRD36CQ5JPF3 1778 aa23.37■■□□□ 1.33
SSBP4-212ENST00000601919 UBR3Q6ZT12 1888 aa23.36■■□□□ 1.33
SSBP4-212ENST00000601919 NEURL1BA8MQ27 555 aa23.36■■□□□ 1.33
SSBP4-212ENST00000601919 TRAPPC3LQ5T215 181 aa23.36■■□□□ 1.33
SSBP4-212ENST00000601919 CCDC136Q96JN2 1154 aa23.36■■□□□ 1.33
SSBP4-212ENST00000601919 C9orf78Q9NZ63 289 aaPredicted RBP23.36■■□□□ 1.33
SSBP4-212ENST00000601919 BCORQ6W2J9 1755 aa23.36■■□□□ 1.33
SSBP4-212ENST00000601919 CAMKK2Q96RR4 588 aa23.35■■□□□ 1.33
SSBP4-212ENST00000601919 IGKV5-2P06315 115 aa23.34■■□□□ 1.33
SSBP4-212ENST00000601919 UBTFL1P0CB47 393 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-212ENST00000601919 SSFA2P28290 1259 aa23.34■■□□□ 1.33
SSBP4-212ENST00000601919 EN1Q05925 392 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-212ENST00000601919 TRIM28Q13263 835 aaKnown RBP23.34■■□□□ 1.33
SSBP4-212ENST00000601919 CWF19L2Q2TBE0 894 aaKnown RBP23.34■■□□□ 1.33
SSBP4-212ENST00000601919 CLEC4GQ6UXB4 293 aa23.34■■□□□ 1.33
SSBP4-212ENST00000601919 CCDC191Q8NCU4 936 aa23.34■■□□□ 1.33
SSBP4-212ENST00000601919 MEIS3Q99687 375 aa23.34■■□□□ 1.33
SSBP4-212ENST00000601919 USP44Q9H0E7 712 aa23.34■■□□□ 1.33
SSBP4-212ENST00000601919 ZPR1O75312 459 aa23.33■■□□□ 1.33
SSBP4-212ENST00000601919 CAMTA2O94983 1202 aa23.33■■□□□ 1.33
SSBP4-212ENST00000601919 GCKRQ14397 625 aa23.33■■□□□ 1.33
SSBP4-212ENST00000601919 CWC25Q9NXE8 425 aaPredicted RBP23.33■■□□□ 1.33
SSBP4-212ENST00000601919 NARFQ9UHQ1 456 aa23.33■■□□□ 1.33
SSBP4-212ENST00000601919 SCN7AQ01118 1682 aa23.32■■□□□ 1.32
SSBP4-212ENST00000601919 ATP5J2-PTCD1G3V325 749 aa23.32■■□□□ 1.32
SSBP4-212ENST00000601919 GRM8O00222 908 aa23.32■■□□□ 1.32
SSBP4-212ENST00000601919 GNAI2P04899 355 aa23.32■■□□□ 1.32
SSBP4-212ENST00000601919 RFC4P35249 363 aa23.32■■□□□ 1.32
SSBP4-212ENST00000601919 ISCA1Q9BUE6 129 aa23.32■■□□□ 1.32
SSBP4-212ENST00000601919 EZH2Q15910 746 aaKnown RBP23.31■■□□□ 1.32
SSBP4-212ENST00000601919 HLFQ16534 295 aa23.31■■□□□ 1.32
SSBP4-212ENST00000601919 FLAD1Q8NFF5 587 aa23.31■■□□□ 1.32
SSBP4-212ENST00000601919 C4AP0C0L4 1744 aa23.3■■□□□ 1.32
SSBP4-212ENST00000601919 ARHGEF1Q92888 912 aaKnown RBP23.3■■□□□ 1.32
SSBP4-212ENST00000601919 TFCP2L1Q9NZI6 479 aa23.3■■□□□ 1.32
SSBP4-212ENST00000601919 UTYO14607 1347 aa23.3■■□□□ 1.32
SSBP4-212ENST00000601919 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.29■■□□□ 1.32
SSBP4-212ENST00000601919 PHF14O94880 888 aa23.29■■□□□ 1.32
SSBP4-212ENST00000601919 AKT1S1Q96B36 256 aa23.29■■□□□ 1.32
SSBP4-212ENST00000601919 B4GALNT3Q6L9W6 998 aa23.28■■□□□ 1.32
SSBP4-212ENST00000601919 RWDD1Q9H446 243 aaPredicted RBP23.28■■□□□ 1.32
SSBP4-212ENST00000601919 PARP10Q53GL7 1025 aa23.27■■□□□ 1.32
SSBP4-212ENST00000601919 RPAP2Q8IXW5 612 aaPredicted RBP23.27■■□□□ 1.32
SSBP4-212ENST00000601919 ZNF34Q8IZ26 560 aa23.27■■□□□ 1.32
SSBP4-212ENST00000601919 PCDHB15Q9Y5E8 787 aa23.27■■□□□ 1.32
SSBP4-212ENST00000601919 USP42Q9H9J4 1324 aaKnown RBP23.27■■□□□ 1.32
SSBP4-212ENST00000601919 NBPF7P0C2Y1 421 aaPredicted RBP23.26■■□□□ 1.31
SSBP4-212ENST00000601919 USPL1Q5W0Q7 1092 aa23.26■■□□□ 1.31
SSBP4-212ENST00000601919 C1orf115Q9H7X2 142 aa23.26■■□□□ 1.31
SSBP4-212ENST00000601919 STK32BQ9NY57 414 aa23.26■■□□□ 1.31
SSBP4-212ENST00000601919 GPTP24298 496 aa23.25■■□□□ 1.31
SSBP4-212ENST00000601919 ZNF827Q17R98 1081 aa23.25■■□□□ 1.31
SSBP4-212ENST00000601919 DEFB132Q7Z7B7 95 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms