RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 BCORQ6W2J9 1755 aa17.81■□□□□ 0.44
SNRPA-208ENST00000600456 MAP3K15Q6ZN16 1313 aa17.81■□□□□ 0.44
SNRPA-208ENST00000600456 DDR1Q08345 913 aa17.81■□□□□ 0.44
SNRPA-208ENST00000600456 CD2APQ9Y5K6 639 aa17.81■□□□□ 0.44
SNRPA-208ENST00000600456 POLRMTO00411 1230 aaKnown RBP17.8■□□□□ 0.44
SNRPA-208ENST00000600456 EXOSC9Q06265 439 aaKnown RBP17.8■□□□□ 0.44
SNRPA-208ENST00000600456 SLFN5Q08AF3 891 aa17.8■□□□□ 0.44
SNRPA-208ENST00000600456 TTLL7Q6ZT98 887 aa17.8■□□□□ 0.44
SNRPA-208ENST00000600456 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
SNRPA-208ENST00000600456 ANXA1P04083 346 aa17.79■□□□□ 0.44
SNRPA-208ENST00000600456 HNRNPUQ00839 825 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNRPA-208ENST00000600456 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
SNRPA-208ENST00000600456 COPS6Q7L5N1 327 aa17.79■□□□□ 0.44
SNRPA-208ENST00000600456 XAGE3Q8WTP9 111 aa17.79■□□□□ 0.44
SNRPA-208ENST00000600456 SYT17Q9BSW7 474 aa17.79■□□□□ 0.44
SNRPA-208ENST00000600456 SETDB2Q96T68 719 aa17.78■□□□□ 0.44
SNRPA-208ENST00000600456 STK31Q9BXU1 1019 aa17.78■□□□□ 0.44
SNRPA-208ENST00000600456 ATP10DQ9P241 1426 aa17.78■□□□□ 0.44
SNRPA-208ENST00000600456 VAMP4O75379 141 aa17.77■□□□□ 0.44
SNRPA-208ENST00000600456 GIGYF2Q6Y7W6 1299 aaKnown RBP17.77■□□□□ 0.44
SNRPA-208ENST00000600456 BICDL1Q6ZP65 573 aa17.77■□□□□ 0.44
SNRPA-208ENST00000600456 KLHL34Q8N239 644 aa17.77■□□□□ 0.44
SNRPA-208ENST00000600456 ZBTB3Q9H5J0 574 aa17.77■□□□□ 0.44
SNRPA-208ENST00000600456 C10orf71Q711Q0 1435 aa17.77■□□□□ 0.44
SNRPA-208ENST00000600456 SERPINB2P05120 415 aa17.76■□□□□ 0.43
SNRPA-208ENST00000600456 AIMP1Q12904 312 aaKnown RBP17.76■□□□□ 0.43
SNRPA-208ENST00000600456 HLFQ16534 295 aa17.76■□□□□ 0.43
SNRPA-208ENST00000600456 TRMT2AQ8IZ69 625 aaKnown RBP17.76■□□□□ 0.43
SNRPA-208ENST00000600456 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
SNRPA-208ENST00000600456 PLBD2Q8NHP8 589 aa17.75■□□□□ 0.43
SNRPA-208ENST00000600456 CDCA7LQ96GN5 454 aa17.75■□□□□ 0.43
SNRPA-208ENST00000600456 NIP7Q9Y221 180 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNRPA-208ENST00000600456 ANKRD13DQ6ZTN6 518 aa17.74■□□□□ 0.43
SNRPA-208ENST00000600456 NRXN2Q9P2S2 1712 aa17.74■□□□□ 0.43
SNRPA-208ENST00000600456 TGFB2P61812 414 aa17.73■□□□□ 0.43
SNRPA-208ENST00000600456 ZNF428Q96B54 188 aa17.73■□□□□ 0.43
SNRPA-208ENST00000600456 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
SNRPA-208ENST00000600456 IBTKQ9P2D0 1353 aaPredicted RBP17.72■□□□□ 0.43
SNRPA-208ENST00000600456 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
SNRPA-208ENST00000600456 SLC4A2P04920 1241 aa17.72■□□□□ 0.43
SNRPA-208ENST00000600456 ZNF34Q8IZ26 560 aa17.72■□□□□ 0.43
SNRPA-208ENST00000600456 CNBD1Q8NA66 436 aa17.72■□□□□ 0.43
SNRPA-208ENST00000600456 NLGN2Q8NFZ4 835 aa17.72■□□□□ 0.43
SNRPA-208ENST00000600456 PHAXQ9H814 394 aaKnown RBP17.72■□□□□ 0.43
SNRPA-208ENST00000600456 KIF13BQ9NQT8 1826 aa17.72■□□□□ 0.43
SNRPA-208ENST00000600456 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
SNRPA-208ENST00000600456 PARP10Q53GL7 1025 aa17.71■□□□□ 0.43
SNRPA-208ENST00000600456 PRR5LQ6MZQ0 368 aa17.71■□□□□ 0.43
SNRPA-208ENST00000600456 TPTE2Q6XPS3 522 aa17.71■□□□□ 0.43
SNRPA-208ENST00000600456 NBPF5PQ86XG9 351 aaPredicted RBP17.71■□□□□ 0.43
SNRPA-208ENST00000600456 TCERG1O14776 1098 aaKnown RBP17.7■□□□□ 0.42
SNRPA-208ENST00000600456 NPHP1O15259 732 aa17.7■□□□□ 0.42
SNRPA-208ENST00000600456 ST5P78524 1137 aa17.7■□□□□ 0.42
SNRPA-208ENST00000600456 TCIRG1Q13488 830 aa17.7■□□□□ 0.42
SNRPA-208ENST00000600456 NYXQ9GZU5 481 aa17.7■□□□□ 0.42
SNRPA-208ENST00000600456 NUP98P52948 1817 aa17.7■□□□□ 0.42
SNRPA-208ENST00000600456 PXDNLA1KZ92 1463 aa17.69■□□□□ 0.42
SNRPA-208ENST00000600456 GPTP24298 496 aa17.69■□□□□ 0.42
SNRPA-208ENST00000600456 RIC3Q7Z5B4 369 aa17.69■□□□□ 0.42
SNRPA-208ENST00000600456 BRIP1Q9BX63 1249 aa17.69■□□□□ 0.42
SNRPA-208ENST00000600456 PDZRN3Q9UPQ7 1066 aa17.69■□□□□ 0.42
SNRPA-208ENST00000600456 AFDNP55196 1824 aaKnown RBP17.69■□□□□ 0.42
SNRPA-208ENST00000600456 RNF123Q5XPI4 1314 aa17.69■□□□□ 0.42
SNRPA-208ENST00000600456 UBN2Q6ZU65 1347 aa17.69■□□□□ 0.42
SNRPA-208ENST00000600456 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
SNRPA-208ENST00000600456 FLIIQ13045 1269 aa17.68■□□□□ 0.42
SNRPA-208ENST00000600456 KSR2Q6VAB6 950 aa17.68■□□□□ 0.42
SNRPA-208ENST00000600456 PPP1R42Q7Z4L9 355 aa17.68■□□□□ 0.42
SNRPA-208ENST00000600456 PDE6BP35913 854 aa17.67■□□□□ 0.42
SNRPA-208ENST00000600456 TRIM28Q13263 835 aaKnown RBP17.67■□□□□ 0.42
SNRPA-208ENST00000600456 GTF2E1P29083 439 aaPredicted RBP17.66■□□□□ 0.42
SNRPA-208ENST00000600456 SUSD4Q5VX71 490 aa17.66■□□□□ 0.42
SNRPA-208ENST00000600456 G2E3Q7L622 706 aa17.66■□□□□ 0.42
SNRPA-208ENST00000600456 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
SNRPA-208ENST00000600456 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
SNRPA-208ENST00000600456 UTP14AQ9BVJ6 771 aaKnown RBP17.66■□□□□ 0.42
SNRPA-208ENST00000600456 RIC1Q4ADV7 1423 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 A0A0G2JLW4 131 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 FAM177BA6PVY3 158 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 NTSR2O95665 410 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 DPEP1P16444 411 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 ALDH1L2Q3SY69 923 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
SNRPA-208ENST00000600456 MAP3K2Q9Y2U5 619 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 CACNA1FO60840 1977 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 ANKRD36CQ5JPF3 1778 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 ADCY9O60503 1353 aa17.65■□□□□ 0.42
SNRPA-208ENST00000600456 KIAA1551Q9HCM1 1747 aa17.64■□□□□ 0.41
SNRPA-208ENST00000600456 ARFGEF2Q9Y6D5 1785 aa17.64■□□□□ 0.41
SNRPA-208ENST00000600456 H0YIN7 160 aa17.64■□□□□ 0.41
SNRPA-208ENST00000600456 FKBP5Q13451 457 aaPredicted RBP17.64■□□□□ 0.41
SNRPA-208ENST00000600456 KCNA3P22001 575 aa17.63■□□□□ 0.41
SNRPA-208ENST00000600456 NEXNQ0ZGT2 675 aa17.63■□□□□ 0.41
SNRPA-208ENST00000600456 C2CD5Q86YS7 1000 aa17.63■□□□□ 0.41
SNRPA-208ENST00000600456 SSH1Q8WYL5 1049 aa17.63■□□□□ 0.41
SNRPA-208ENST00000600456 MYD88Q99836 296 aa17.63■□□□□ 0.41
SNRPA-208ENST00000600456 KLRG2A4D1S0 409 aaPredicted RBP17.62■□□□□ 0.41
SNRPA-208ENST00000600456 CHRNA5P30532 468 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms