RNA–Protein interactions for RNA: ENST00000600139.1

C19orf54-210, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-210ENST00000600139 H0YIN7 160 aa11.79□□□□□ -0.52
C19orf54-210ENST00000600139 C21orf2O43822 256 aa11.79□□□□□ -0.52
C19orf54-210ENST00000600139 TEFQ10587 303 aa11.79□□□□□ -0.52
C19orf54-210ENST00000600139 COL13A1Q5TAT6 717 aaPredicted RBP11.79□□□□□ -0.52
C19orf54-210ENST00000600139 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
C19orf54-210ENST00000600139 TTC5Q8N0Z6 440 aa11.79□□□□□ -0.52
C19orf54-210ENST00000600139 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
C19orf54-210ENST00000600139 PRPF40BQ6NWY9 871 aaKnown RBP11.78□□□□□ -0.52
C19orf54-210ENST00000600139 LTBP1Q14766 1721 aa11.77□□□□□ -0.52
C19orf54-210ENST00000600139 NUP98P52948 1817 aa11.77□□□□□ -0.52
C19orf54-210ENST00000600139 BTBD11A6QL63 1104 aa11.77□□□□□ -0.53
C19orf54-210ENST00000600139 VEGFAP15692 232 aaPredicted RBP11.77□□□□□ -0.53
C19orf54-210ENST00000600139 STYK1Q6J9G0 422 aa11.77□□□□□ -0.53
C19orf54-210ENST00000600139 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.53
C19orf54-210ENST00000600139 SMC1BQ8NDV3 1235 aa11.77□□□□□ -0.53
C19orf54-210ENST00000600139 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
C19orf54-210ENST00000600139 HLFQ16534 295 aa11.76□□□□□ -0.53
C19orf54-210ENST00000600139 CNBD1Q8NA66 436 aa11.76□□□□□ -0.53
C19orf54-210ENST00000600139 TEX13AQ9BXU3 409 aaPredicted RBP11.76□□□□□ -0.53
C19orf54-210ENST00000600139 ZNF330Q9Y3S2 320 aaPredicted RBP11.76□□□□□ -0.53
C19orf54-210ENST00000600139 PDE6BP35913 854 aa11.75□□□□□ -0.53
C19orf54-210ENST00000600139 LRP10Q7Z4F1 713 aa11.75□□□□□ -0.53
C19orf54-210ENST00000600139 ZNF622Q969S3 477 aaKnown RBP eCLIP11.75□□□□□ -0.53
C19orf54-210ENST00000600139 PLEKHF1Q96S99 279 aa11.75□□□□□ -0.53
C19orf54-210ENST00000600139 MIS18AQ9NYP9 233 aa11.75□□□□□ -0.53
C19orf54-210ENST00000600139 ZNF541Q9H0D2 1346 aa11.75□□□□□ -0.53
C19orf54-210ENST00000600139 SCN4AP35499 1836 aa11.74□□□□□ -0.53
C19orf54-210ENST00000600139 DDNO94850 711 aaPredicted RBP11.74□□□□□ -0.53
C19orf54-210ENST00000600139 SNRPA1P09661 255 aaKnown RBP11.74□□□□□ -0.53
C19orf54-210ENST00000600139 CLEC4GQ6UXB4 293 aa11.74□□□□□ -0.53
C19orf54-210ENST00000600139 C16orf71Q8IYS4 520 aaPredicted RBP11.74□□□□□ -0.53
C19orf54-210ENST00000600139 SETDB2Q96T68 719 aa11.74□□□□□ -0.53
C19orf54-210ENST00000600139 TAOK3Q9H2K8 898 aa11.74□□□□□ -0.53
C19orf54-210ENST00000600139 PASKQ96RG2 1323 aa11.74□□□□□ -0.53
C19orf54-210ENST00000600139 RGL2O15211 777 aa11.73□□□□□ -0.53
C19orf54-210ENST00000600139 U2AF1L5P0DN76 240 aaPredicted RBP11.73□□□□□ -0.53
C19orf54-210ENST00000600139 U2AF1Q01081 240 aaKnown RBP eCLIP11.73□□□□□ -0.53
C19orf54-210ENST00000600139 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
C19orf54-210ENST00000600139 UBN2Q6ZU65 1347 aa11.73□□□□□ -0.53
C19orf54-210ENST00000600139 MASTLQ96GX5 879 aa11.73□□□□□ -0.53
C19orf54-210ENST00000600139 L3MBTL3Q96JM7 780 aaPredicted RBP11.73□□□□□ -0.53
C19orf54-210ENST00000600139 THUMPD2Q9BTF0 503 aaKnown RBP11.73□□□□□ -0.53
C19orf54-210ENST00000600139 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
C19orf54-210ENST00000600139 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
C19orf54-210ENST00000600139 CRY2Q49AN0 593 aa11.72□□□□□ -0.53
C19orf54-210ENST00000600139 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
C19orf54-210ENST00000600139 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
C19orf54-210ENST00000600139 LAMB2P55268 1798 aa11.72□□□□□ -0.53
C19orf54-210ENST00000600139 COL4A1P02462 1669 aa11.71□□□□□ -0.53
C19orf54-210ENST00000600139 HTATSF1O43719 755 aaKnown RBP11.71□□□□□ -0.53
C19orf54-210ENST00000600139 TTLL7Q6ZT98 887 aa11.71□□□□□ -0.53
C19orf54-210ENST00000600139 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
C19orf54-210ENST00000600139 HSPA1AP0DMV8 641 aaKnown RBP11.7□□□□□ -0.54
C19orf54-210ENST00000600139 HSPA1BP0DMV9 641 aaKnown RBP11.7□□□□□ -0.54
C19orf54-210ENST00000600139 NPR1P16066 1061 aa11.7□□□□□ -0.54
C19orf54-210ENST00000600139 EIF4A1P60842 406 aaKnown RBP11.7□□□□□ -0.54
C19orf54-210ENST00000600139 ST5P78524 1137 aa11.7□□□□□ -0.54
C19orf54-210ENST00000600139 NBPF5PQ86XG9 351 aaPredicted RBP11.7□□□□□ -0.54
C19orf54-210ENST00000600139 CFAP53Q96M91 514 aa11.7□□□□□ -0.54
C19orf54-210ENST00000600139 ZNF277Q9NRM2 450 aaPredicted RBP11.7□□□□□ -0.54
C19orf54-210ENST00000600139 NIP7Q9Y221 180 aaKnown RBP eCLIP11.7□□□□□ -0.54
C19orf54-210ENST00000600139 THSD7BQ9C0I4 1608 aa11.69□□□□□ -0.54
C19orf54-210ENST00000600139 PDIA6Q15084 440 aa11.69□□□□□ -0.54
C19orf54-210ENST00000600139 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
C19orf54-210ENST00000600139 CHADLQ6NUI6 762 aa11.69□□□□□ -0.54
C19orf54-210ENST00000600139 TAF1DQ9H5J8 278 aaPredicted RBP11.69□□□□□ -0.54
C19orf54-210ENST00000600139 CNTNAP1P78357 1384 aa11.68□□□□□ -0.54
C19orf54-210ENST00000600139 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
C19orf54-210ENST00000600139 DUOX1Q9NRD9 1551 aa11.68□□□□□ -0.54
C19orf54-210ENST00000600139 FZD9O00144 591 aa11.68□□□□□ -0.54
C19orf54-210ENST00000600139 FKBP4Q02790 459 aaKnown RBP eCLIP11.68□□□□□ -0.54
C19orf54-210ENST00000600139 CCDC93Q567U6 631 aa11.68□□□□□ -0.54
C19orf54-210ENST00000600139 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
C19orf54-210ENST00000600139 ANKRD36CQ5JPF3 1778 aa11.67□□□□□ -0.54
C19orf54-210ENST00000600139 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
C19orf54-210ENST00000600139 FAM177BA6PVY3 158 aa11.67□□□□□ -0.54
C19orf54-210ENST00000600139 NTSR2O95665 410 aa11.67□□□□□ -0.54
C19orf54-210ENST00000600139 NFE2L2Q16236 605 aa11.67□□□□□ -0.54
C19orf54-210ENST00000600139 PROSER3Q2NL68 480 aa11.67□□□□□ -0.54
C19orf54-210ENST00000600139 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
C19orf54-210ENST00000600139 NUDCQ9Y266 331 aa11.67□□□□□ -0.54
C19orf54-210ENST00000600139 ERVV-1B6SEH8 477 aa11.66□□□□□ -0.54
C19orf54-210ENST00000600139 HOXA10P31260 410 aaPredicted RBP11.66□□□□□ -0.54
C19orf54-210ENST00000600139 SUSD4Q5VX71 490 aa11.66□□□□□ -0.54
C19orf54-210ENST00000600139 ZNF34Q8IZ26 560 aa11.66□□□□□ -0.54
C19orf54-210ENST00000600139 RTF1Q92541 710 aaKnown RBP11.66□□□□□ -0.54
C19orf54-210ENST00000600139 ZNF652Q9Y2D9 606 aa11.66□□□□□ -0.54
C19orf54-210ENST00000600139 TAF1P21675 1872 aa11.66□□□□□ -0.54
C19orf54-210ENST00000600139 SOGA3Q5TF21 947 aa11.65□□□□□ -0.54
C19orf54-210ENST00000600139 DPY19L2Q6NUT2 758 aa11.65□□□□□ -0.54
C19orf54-210ENST00000600139 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
C19orf54-210ENST00000600139 MKRN1Q9UHC7 482 aaKnown RBP11.65□□□□□ -0.54
C19orf54-210ENST00000600139 LRRC37AA6NMS7 1700 aa11.65□□□□□ -0.54
C19orf54-210ENST00000600139 RNF123Q5XPI4 1314 aa11.64□□□□□ -0.55
C19orf54-210ENST00000600139 DDX60Q8IY21 1712 aaKnown RBP11.64□□□□□ -0.55
C19orf54-210ENST00000600139 GPTP24298 496 aa11.64□□□□□ -0.55
C19orf54-210ENST00000600139 IARSP41252 1262 aaKnown RBP11.64□□□□□ -0.55
C19orf54-210ENST00000600139 FMR1Q06787 632 aaKnown RBP eCLIP11.64□□□□□ -0.55
C19orf54-210ENST00000600139 TPTE2Q6XPS3 522 aa11.64□□□□□ -0.55
C19orf54-210ENST00000600139 SYNE4Q8N205 404 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms