RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 SF3A1Q15459 793 aaKnown RBP5.89□□□□□ -1.47
LINC00649-204ENST00000593977 EML3Q32P44 896 aa5.89□□□□□ -1.47
LINC00649-204ENST00000593977 TAF7LQ5H9L4 462 aa5.89□□□□□ -1.47
LINC00649-204ENST00000593977 TMED8Q6PL24 325 aaPredicted RBP5.89□□□□□ -1.47
LINC00649-204ENST00000593977 EVA1BQ9NVM1 165 aa5.89□□□□□ -1.47
LINC00649-204ENST00000593977 SPAG9O60271 1321 aaKnown RBP5.89□□□□□ -1.47
LINC00649-204ENST00000593977 NKTRP30414 1462 aaKnown RBP5.89□□□□□ -1.47
LINC00649-204ENST00000593977 RALGAPBQ86X10 1494 aa5.89□□□□□ -1.47
LINC00649-204ENST00000593977 ADGBQ8N7X0 1667 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 SOWAHBA6NEL2 793 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 ATP2B4P23634 1241 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 ATP1A2P50993 1020 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 APLP1P51693 650 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 TICAM2Q86XR7 235 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 NUDT12Q9BQG2 462 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 SPON1Q9HCB6 807 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 TSR3Q9UJK0 312 aaKnown RBP5.88□□□□□ -1.47
LINC00649-204ENST00000593977 SLIT1O75093 1534 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 SAMD9LQ8IVG5 1584 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 MAST1Q9Y2H9 1570 aa5.88□□□□□ -1.47
LINC00649-204ENST00000593977 KDM5AP29375 1690 aaKnown RBP5.88□□□□□ -1.47
LINC00649-204ENST00000593977 SOWAHDA6NJG2 315 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 GOLGA8CPA6NN73 597 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 MMP16P51512 607 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 ADGRD1Q6QNK2 874 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 DPH6Q7L8W6 267 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 NPAS4Q8IUM7 802 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 LARGE2Q8N3Y3 721 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 OGFOD1Q8N543 542 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 DNAJC5GQ8N7S2 189 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 C1orf216Q8TAB5 229 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 SLC26A8Q96RN1 970 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 OCSTAMPQ9BR26 566 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 ARHGAP9Q9BRR9 750 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 HPS5Q9UPZ3 1129 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 NOD1Q9Y239 953 aa5.87□□□□□ -1.47
LINC00649-204ENST00000593977 CAMSAP2Q08AD1 1489 aa5.86□□□□□ -1.47
LINC00649-204ENST00000593977 NCOA3Q9Y6Q9 1424 aa5.86□□□□□ -1.47
LINC00649-204ENST00000593977 KCNQ2O43526 872 aa5.86□□□□□ -1.47
LINC00649-204ENST00000593977 RECKO95980 971 aa5.86□□□□□ -1.47
LINC00649-204ENST00000593977 MARSP56192 900 aaKnown RBP5.86□□□□□ -1.47
LINC00649-204ENST00000593977 DPYDQ12882 1025 aa5.86□□□□□ -1.47
LINC00649-204ENST00000593977 TRAF7Q6Q0C0 670 aa5.86□□□□□ -1.47
LINC00649-204ENST00000593977 ADAM32Q8TC27 787 aa5.86□□□□□ -1.47
LINC00649-204ENST00000593977 ZNF526Q8TF50 670 aaPredicted RBP5.86□□□□□ -1.47
LINC00649-204ENST00000593977 DNAAF2Q9NVR5 837 aaKnown RBP5.86□□□□□ -1.47
LINC00649-204ENST00000593977 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.86□□□□□ -1.47
LINC00649-204ENST00000593977 EID1Q9Y6B2 187 aa5.86□□□□□ -1.47
LINC00649-204ENST00000593977 CHD4Q14839 1912 aa5.86□□□□□ -1.47
LINC00649-204ENST00000593977 WASHC2CQ9Y4E1 1318 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 ANKRD33BA6NCL7 494 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 HRO43593 1189 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 CLDN10P78369 228 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 TAGLNQ01995 201 aaKnown RBP5.85□□□□□ -1.47
LINC00649-204ENST00000593977 ZNF326Q5BKZ1 582 aaKnown RBP5.85□□□□□ -1.47
LINC00649-204ENST00000593977 ZBTB33Q86T24 672 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 SIX5Q8N196 739 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 STAC3Q96MF2 364 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 SPSB2Q99619 263 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 C19orf44Q9H6X5 657 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 RBM19Q9Y4C8 960 aaKnown RBP5.85□□□□□ -1.47
LINC00649-204ENST00000593977 CDC42BPBQ9Y5S2 1711 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 TET3O43151 1660 aa5.85□□□□□ -1.47
LINC00649-204ENST00000593977 ARHGAP35Q9NRY4 1499 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 PTCH1Q13635 1447 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 ATF3P18847 181 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 EZH2Q15910 746 aaKnown RBP5.84□□□□□ -1.47
LINC00649-204ENST00000593977 Q6ZNB5 142 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 SH3BP5LQ7L8J4 393 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 DZIP3Q86Y13 1208 aaKnown RBP5.84□□□□□ -1.47
LINC00649-204ENST00000593977 SEPT12Q8IYM1 358 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 FAM160A2Q8N612 972 aaPredicted RBP5.84□□□□□ -1.47
LINC00649-204ENST00000593977 ZNF594Q96JF6 807 aaPredicted RBP5.84□□□□□ -1.47
LINC00649-204ENST00000593977 CAMKK2Q96RR4 588 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 PRDM16Q9HAZ2 1276 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 DOLKQ9UPQ8 538 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 SPHKAPQ2M3C7 1700 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 MROH1Q8NDA8 1641 aa5.84□□□□□ -1.47
LINC00649-204ENST00000593977 DISP2A7MBM2 1401 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 BRWD3Q6RI45 1802 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 UBR1Q8IWV7 1749 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 CLSTN1O94985 981 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 SERPINB4P48594 390 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 BCAMP50895 628 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 HNRNPMP52272 730 aaKnown RBP eCLIP5.83□□□□□ -1.48
LINC00649-204ENST00000593977 SEC13P55735 322 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 RNF20Q5VTR2 975 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 KRT27Q7Z3Y8 459 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 MICAL1Q8TDZ2 1067 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 DDX17Q92841 729 aaKnown RBP5.83□□□□□ -1.48
LINC00649-204ENST00000593977 BCCIPQ9P287 314 aaKnown RBP eCLIP5.83□□□□□ -1.48
LINC00649-204ENST00000593977 EGFL7Q9UHF1 273 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 RIPOR2Q9Y4F9 1068 aa5.83□□□□□ -1.48
LINC00649-204ENST00000593977 TMEM2Q9UHN6 1383 aa5.82□□□□□ -1.48
LINC00649-204ENST00000593977 GLI3P10071 1580 aa5.82□□□□□ -1.48
LINC00649-204ENST00000593977 LOC102724159A0A0B4J2E5 919 aa5.82□□□□□ -1.48
LINC00649-204ENST00000593977 FAM83GA6ND36 823 aa5.82□□□□□ -1.48
LINC00649-204ENST00000593977 ERCC5P28715 1186 aaPredicted RBP5.82□□□□□ -1.48
LINC00649-204ENST00000593977 GTF2IP78347 998 aa5.82□□□□□ -1.48
LINC00649-204ENST00000593977 PWP2Q15269 919 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms