RNA–Protein interactions for RNA: ENST00000593922.5

IRF3-207, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-207ENST00000593922 HYPKQ9NX55 129 aa28.32■■■□□ 2.12
IRF3-207ENST00000593922 MSL1Q68DK7 614 aa28.31■■■□□ 2.12
IRF3-207ENST00000593922 STK31Q9BXU1 1019 aa28.31■■■□□ 2.12
IRF3-207ENST00000593922 BCL2L12Q9HB09 334 aa28.31■■■□□ 2.12
IRF3-207ENST00000593922 XAGE3Q8WTP9 111 aa28.3■■■□□ 2.12
IRF3-207ENST00000593922 RNF123Q5XPI4 1314 aa28.29■■■□□ 2.12
IRF3-207ENST00000593922 MAP3K15Q6ZN16 1313 aa28.29■■■□□ 2.12
IRF3-207ENST00000593922 COPS6Q7L5N1 327 aa28.28■■■□□ 2.12
IRF3-207ENST00000593922 ZNF428Q96B54 188 aa28.28■■■□□ 2.12
IRF3-207ENST00000593922 AFDNP55196 1824 aaKnown RBP28.28■■■□□ 2.12
IRF3-207ENST00000593922 FKBP8Q14318 412 aa28.27■■■□□ 2.12
IRF3-207ENST00000593922 KIF6Q6ZMV9 814 aa28.27■■■□□ 2.12
IRF3-207ENST00000593922 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.27■■■□□ 2.12
IRF3-207ENST00000593922 ARXQ96QS3 562 aa28.27■■■□□ 2.12
IRF3-207ENST00000593922 SGIP1Q9BQI5 828 aa28.27■■■□□ 2.12
IRF3-207ENST00000593922 PHAXQ9H814 394 aaKnown RBP28.27■■■□□ 2.12
IRF3-207ENST00000593922 RGL2O15211 777 aa28.27■■■□□ 2.12
IRF3-207ENST00000593922 ATF5Q9Y2D1 282 aaPredicted RBP28.27■■■□□ 2.12
IRF3-207ENST00000593922 NRXN2Q9P2S2 1712 aa28.27■■■□□ 2.12
IRF3-207ENST00000593922 SLC4A2P04920 1241 aa28.26■■■□□ 2.11
IRF3-207ENST00000593922 PTGER2P43116 358 aa28.26■■■□□ 2.11
IRF3-207ENST00000593922 SPON1Q9HCB6 807 aa28.26■■■□□ 2.11
IRF3-207ENST00000593922 ERVV-1B6SEH8 477 aa28.25■■■□□ 2.11
IRF3-207ENST00000593922 AIMP1Q12904 312 aaKnown RBP28.25■■■□□ 2.11
IRF3-207ENST00000593922 ERICH6BQ5W0A0 696 aa28.25■■■□□ 2.11
IRF3-207ENST00000593922 NLGN1Q8N2Q7 840 aa28.25■■■□□ 2.11
IRF3-207ENST00000593922 ZBTB3Q9H5J0 574 aa28.25■■■□□ 2.11
IRF3-207ENST00000593922 ATP10DQ9P241 1426 aa28.25■■■□□ 2.11
IRF3-207ENST00000593922 HLFQ16534 295 aa28.23■■■□□ 2.11
IRF3-207ENST00000593922 CLEC4GQ6UXB4 293 aa28.23■■■□□ 2.11
IRF3-207ENST00000593922 G2E3Q7L622 706 aa28.23■■■□□ 2.11
IRF3-207ENST00000593922 RRP1P56182 461 aaKnown RBP28.22■■■□□ 2.11
IRF3-207ENST00000593922 SSH1Q8WYL5 1049 aa28.22■■■□□ 2.11
IRF3-207ENST00000593922 ZNF652Q9Y2D9 606 aa28.22■■■□□ 2.11
IRF3-207ENST00000593922 ALDH1L2Q3SY69 923 aa28.21■■■□□ 2.11
IRF3-207ENST00000593922 MMP10P09238 476 aa28.21■■■□□ 2.11
IRF3-207ENST00000593922 FLIIQ13045 1269 aa28.21■■■□□ 2.11
IRF3-207ENST00000593922 GIGYF2Q6Y7W6 1299 aaKnown RBP28.21■■■□□ 2.11
IRF3-207ENST00000593922 PLBD2Q8NHP8 589 aa28.21■■■□□ 2.11
IRF3-207ENST00000593922 KIF13BQ9NQT8 1826 aa28.2■■■□□ 2.11
IRF3-207ENST00000593922 NFIXQ14938 502 aa28.2■■■□□ 2.1
IRF3-207ENST00000593922 TBC1D9BQ66K14 1250 aa28.2■■■□□ 2.1
IRF3-207ENST00000593922 BCL2L13Q9BXK5 485 aa28.2■■■□□ 2.1
IRF3-207ENST00000593922 ADCY9O60503 1353 aa28.19■■■□□ 2.1
IRF3-207ENST00000593922 TM4SF1P30408 202 aa28.19■■■□□ 2.1
IRF3-207ENST00000593922 DDR1Q08345 913 aa28.19■■■□□ 2.1
IRF3-207ENST00000593922 ANKRD13DQ6ZTN6 518 aa28.19■■■□□ 2.1
IRF3-207ENST00000593922 MRPL50Q8N5N7 158 aaKnown RBP28.19■■■□□ 2.1
IRF3-207ENST00000593922 RARSP54136 660 aaKnown RBP28.18■■■□□ 2.1
IRF3-207ENST00000593922 N4BP2Q86UW6 1770 aaPredicted RBP28.18■■■□□ 2.1
IRF3-207ENST00000593922 POLD1P28340 1107 aa28.17■■■□□ 2.1
IRF3-207ENST00000593922 SMC4Q9NTJ3 1288 aa28.17■■■□□ 2.1
IRF3-207ENST00000593922 CARMIL3Q8ND23 1372 aa28.17■■■□□ 2.1
IRF3-207ENST00000593922 POLRMTO00411 1230 aaKnown RBP28.16■■■□□ 2.1
IRF3-207ENST00000593922 DDX58O95786 925 aaKnown RBP28.15■■■□□ 2.1
IRF3-207ENST00000593922 BICDL1Q6ZP65 573 aa28.15■■■□□ 2.1
IRF3-207ENST00000593922 UBN2Q6ZU65 1347 aa28.14■■■□□ 2.1
IRF3-207ENST00000593922 ANKRD31Q8N7Z5 1873 aa28.14■■■□□ 2.09
IRF3-207ENST00000593922 BRPF1P55201 1214 aaPredicted RBP28.14■■■□□ 2.09
IRF3-207ENST00000593922 FKBP5Q13451 457 aaPredicted RBP28.14■■■□□ 2.09
IRF3-207ENST00000593922 NIP7Q9Y221 180 aaKnown RBP eCLIP28.14■■■□□ 2.09
IRF3-207ENST00000593922 PI4KAP2A4QPH2 592 aa28.13■■■□□ 2.09
IRF3-207ENST00000593922 KSR2Q6VAB6 950 aa28.13■■■□□ 2.09
IRF3-207ENST00000593922 RIC3Q7Z5B4 369 aa28.13■■■□□ 2.09
IRF3-207ENST00000593922 PI4KAP1Q8N8J0 262 aa28.13■■■□□ 2.09
IRF3-207ENST00000593922 C10orf71Q711Q0 1435 aa28.12■■■□□ 2.09
IRF3-207ENST00000593922 HSP90AB3PQ58FF7 597 aa28.12■■■□□ 2.09
IRF3-207ENST00000593922 ZNF34Q8IZ26 560 aa28.12■■■□□ 2.09
IRF3-207ENST00000593922 KIAA1551Q9HCM1 1747 aa28.11■■■□□ 2.09
IRF3-207ENST00000593922 TCIRG1Q13488 830 aa28.11■■■□□ 2.09
IRF3-207ENST00000593922 SETDB2Q96T68 719 aa28.11■■■□□ 2.09
IRF3-207ENST00000593922 MAP3K2Q9Y2U5 619 aa28.11■■■□□ 2.09
IRF3-207ENST00000593922 PARP3Q9Y6F1 533 aa28.11■■■□□ 2.09
IRF3-207ENST00000593922 IBTKQ9P2D0 1353 aaPredicted RBP28.1■■■□□ 2.09
IRF3-207ENST00000593922 GPTP24298 496 aa28.1■■■□□ 2.09
IRF3-207ENST00000593922 PTPRCP08575 1304 aa28.1■■■□□ 2.09
IRF3-207ENST00000593922 ISCA1Q9BUE6 129 aa28.08■■■□□ 2.09
IRF3-207ENST00000593922 METTL22Q9BUU2 404 aaPredicted RBP28.08■■■□□ 2.09
IRF3-207ENST00000593922 LAMB2P55268 1798 aa28.08■■■□□ 2.09
IRF3-207ENST00000593922 KIF16BQ96L93 1317 aa28.08■■■□□ 2.09
IRF3-207ENST00000593922 PXDNLA1KZ92 1463 aa28.08■■■□□ 2.09
IRF3-207ENST00000593922 BCAR3O75815 825 aa28.08■■■□□ 2.09
IRF3-207ENST00000593922 SERPINB2P05120 415 aa28.08■■■□□ 2.09
IRF3-207ENST00000593922 IRX6P78412 446 aaPredicted RBP28.08■■■□□ 2.09
IRF3-207ENST00000593922 DNAAF4Q8WXU2 420 aa28.07■■■□□ 2.08
IRF3-207ENST00000593922 TNRC6CQ9HCJ0 1690 aaKnown RBP28.06■■■□□ 2.08
IRF3-207ENST00000593922 F6X3S4 739 aa28.06■■■□□ 2.08
IRF3-207ENST00000593922 PARP10Q53GL7 1025 aa28.06■■■□□ 2.08
IRF3-207ENST00000593922 NLRP10Q86W26 655 aa28.06■■■□□ 2.08
IRF3-207ENST00000593922 MS4A1P11836 297 aa28.05■■■□□ 2.08
IRF3-207ENST00000593922 MYD88Q99836 296 aa28.05■■■□□ 2.08
IRF3-207ENST00000593922 GOLGB1Q14789 3259 aaKnown RBP28.05■■■□□ 2.08
IRF3-207ENST00000593922 COL11A2P13942 1736 aaPredicted RBP28.05■■■□□ 2.08
IRF3-207ENST00000593922 DDX60Q8IY21 1712 aaKnown RBP28.05■■■□□ 2.08
IRF3-207ENST00000593922 DLEC1Q9Y238 1755 aa28.05■■■□□ 2.08
IRF3-207ENST00000593922 ATP5J2-PTCD1G3V325 749 aa28.04■■■□□ 2.08
IRF3-207ENST00000593922 TRIM28Q13263 835 aaKnown RBP28.04■■■□□ 2.08
IRF3-207ENST00000593922 PPP1R1BQ9UD71 204 aaPredicted RBP28.04■■■□□ 2.08
IRF3-207ENST00000593922 NTSR2O95665 410 aa28.03■■■□□ 2.08
IRF3-207ENST00000593922 SUSD4Q5VX71 490 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms