RNA–Protein interactions for RNA: ENST00000592483.5

CAPNS1-214, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-214ENST00000592483 ZNF219Q9P2Y4 722 aaPredicted RBP31■■■□□ 2.55
CAPNS1-214ENST00000592483 VIRMAQ69YN4 1812 aaKnown RBP31■■■□□ 2.55
CAPNS1-214ENST00000592483 ITGBL1O95965 494 aaPredicted RBP30.98■■■□□ 2.55
CAPNS1-214ENST00000592483 HSPA8P11142 646 aaKnown RBP30.98■■■□□ 2.55
CAPNS1-214ENST00000592483 PDE6BP35913 854 aa30.98■■■□□ 2.55
CAPNS1-214ENST00000592483 MLLT1Q03111 559 aaPredicted RBP30.98■■■□□ 2.55
CAPNS1-214ENST00000592483 NGEFQ8N5V2 710 aa30.98■■■□□ 2.55
CAPNS1-214ENST00000592483 BRIP1Q9BX63 1249 aa30.98■■■□□ 2.55
CAPNS1-214ENST00000592483 NCBP3Q53F19 620 aaKnown RBP30.97■■■□□ 2.55
CAPNS1-214ENST00000592483 CCDC146Q8IYE0 955 aa30.97■■■□□ 2.55
CAPNS1-214ENST00000592483 L3MBTL3Q96JM7 780 aaPredicted RBP30.97■■■□□ 2.55
CAPNS1-214ENST00000592483 TAF1DQ9H5J8 278 aaPredicted RBP30.97■■■□□ 2.55
CAPNS1-214ENST00000592483 ZBTB1Q9Y2K1 713 aa30.97■■■□□ 2.55
CAPNS1-214ENST00000592483 PHACTR3Q96KR7 559 aa30.96■■■□□ 2.55
CAPNS1-214ENST00000592483 RGS19P49795 217 aa30.95■■■□□ 2.55
CAPNS1-214ENST00000592483 SCN4AP35499 1836 aa30.94■■■□□ 2.54
CAPNS1-214ENST00000592483 MAP2K1Q02750 393 aaPredicted RBP30.94■■■□□ 2.54
CAPNS1-214ENST00000592483 NFE2L2Q16236 605 aa30.94■■■□□ 2.54
CAPNS1-214ENST00000592483 BICDL1Q6ZP65 573 aa30.94■■■□□ 2.54
CAPNS1-214ENST00000592483 SLC52A2Q9HAB3 445 aa30.94■■■□□ 2.54
CAPNS1-214ENST00000592483 SCN11AQ9UI33 1791 aa30.94■■■□□ 2.54
CAPNS1-214ENST00000592483 RASSF10A6NK89 507 aa30.93■■■□□ 2.54
CAPNS1-214ENST00000592483 MTHFSDQ2M296 383 aaKnown RBP30.92■■■□□ 2.54
CAPNS1-214ENST00000592483 DEFB115Q30KQ5 88 aa30.92■■■□□ 2.54
CAPNS1-214ENST00000592483 ANKRD31Q8N7Z5 1873 aa30.92■■■□□ 2.54
CAPNS1-214ENST00000592483 APAF1O14727 1248 aa30.9■■■□□ 2.54
CAPNS1-214ENST00000592483 TMPOP42166 694 aaKnown RBP30.9■■■□□ 2.54
CAPNS1-214ENST00000592483 SOGA3Q5TF21 947 aa30.9■■■□□ 2.54
CAPNS1-214ENST00000592483 LMOD3Q0VAK6 560 aa30.89■■■□□ 2.54
CAPNS1-214ENST00000592483 SLC39A6Q13433 755 aa30.89■■■□□ 2.54
CAPNS1-214ENST00000592483 AKAP4Q5JQC9 854 aa30.89■■■□□ 2.54
CAPNS1-214ENST00000592483 VSIG10Q8N0Z9 540 aa30.89■■■□□ 2.54
CAPNS1-214ENST00000592483 CNKSR1Q969H4 720 aa30.89■■■□□ 2.54
CAPNS1-214ENST00000592483 CCDC85CA6NKD9 419 aa30.88■■■□□ 2.53
CAPNS1-214ENST00000592483 HTATSF1O43719 755 aaKnown RBP30.88■■■□□ 2.53
CAPNS1-214ENST00000592483 CANXP27824 592 aaKnown RBP30.88■■■□□ 2.53
CAPNS1-214ENST00000592483 PRR5LQ6MZQ0 368 aa30.88■■■□□ 2.53
CAPNS1-214ENST00000592483 A0A087WZG4 1122 aa30.87■■■□□ 2.53
CAPNS1-214ENST00000592483 EAPPQ56P03 285 aaPredicted RBP30.87■■■□□ 2.53
CAPNS1-214ENST00000592483 TBC1D9BQ66K14 1250 aa30.87■■■□□ 2.53
CAPNS1-214ENST00000592483 WDR33Q9C0J8 1336 aaKnown RBP30.87■■■□□ 2.53
CAPNS1-214ENST00000592483 EIF5P55010 431 aaKnown RBP30.86■■■□□ 2.53
CAPNS1-214ENST00000592483 STYK1Q6J9G0 422 aa30.86■■■□□ 2.53
CAPNS1-214ENST00000592483 LGR6Q9HBX8 967 aa30.86■■■□□ 2.53
CAPNS1-214ENST00000592483 CLEC11AQ9Y240 323 aa30.86■■■□□ 2.53
CAPNS1-214ENST00000592483 COL11A2P13942 1736 aaPredicted RBP30.86■■■□□ 2.53
CAPNS1-214ENST00000592483 PRPF40BQ6NWY9 871 aaKnown RBP30.85■■■□□ 2.53
CAPNS1-214ENST00000592483 GNAT3A8MTJ3 354 aa30.84■■■□□ 2.53
CAPNS1-214ENST00000592483 RIPK4P57078 832 aa30.84■■■□□ 2.53
CAPNS1-214ENST00000592483 CCDC27Q2M243 656 aa30.84■■■□□ 2.53
CAPNS1-214ENST00000592483 CCDC24Q8N4L8 307 aa30.84■■■□□ 2.53
CAPNS1-214ENST00000592483 HACL1Q9UJ83 578 aa30.84■■■□□ 2.53
CAPNS1-214ENST00000592483 SLX4Q8IY92 1834 aa30.84■■■□□ 2.53
CAPNS1-214ENST00000592483 CNTROBQ8N137 903 aa30.83■■■□□ 2.53
CAPNS1-214ENST00000592483 PNMA8AQ86V59 439 aaPredicted RBP30.82■■■□□ 2.52
CAPNS1-214ENST00000592483 MRC1P22897 1456 aa30.82■■■□□ 2.52
CAPNS1-214ENST00000592483 STARD3NLO95772 234 aa30.81■■■□□ 2.52
CAPNS1-214ENST00000592483 SRGNP10124 158 aa30.81■■■□□ 2.52
CAPNS1-214ENST00000592483 EPHX2P34913 555 aa30.81■■■□□ 2.52
CAPNS1-214ENST00000592483 RTF1Q92541 710 aaKnown RBP30.81■■■□□ 2.52
CAPNS1-214ENST00000592483 ADAMTSL1Q8N6G6 1762 aa30.8■■■□□ 2.52
CAPNS1-214ENST00000592483 RNMTO43148 476 aaKnown RBP30.8■■■□□ 2.52
CAPNS1-214ENST00000592483 MASTLQ96GX5 879 aa30.8■■■□□ 2.52
CAPNS1-214ENST00000592483 ABT1Q9ULW3 272 aaKnown RBP30.8■■■□□ 2.52
CAPNS1-214ENST00000592483 DLG5Q8TDM6 1919 aa30.8■■■□□ 2.52
CAPNS1-214ENST00000592483 RRP7AQ9Y3A4 280 aaKnown RBP30.79■■■□□ 2.52
CAPNS1-214ENST00000592483 HNRNPUQ00839 825 aaKnown RBP eCLIP30.78■■■□□ 2.52
CAPNS1-214ENST00000592483 MAP1SQ66K74 1059 aaPredicted RBP30.78■■■□□ 2.52
CAPNS1-214ENST00000592483 C7orf43Q8WVR3 580 aa30.78■■■□□ 2.52
CAPNS1-214ENST00000592483 BEGAINQ9BUH8 593 aa30.78■■■□□ 2.52
CAPNS1-214ENST00000592483 CNBD1Q8NA66 436 aa30.77■■■□□ 2.52
CAPNS1-214ENST00000592483 ZNF541Q9H0D2 1346 aa30.76■■■□□ 2.52
CAPNS1-214ENST00000592483 NEUROD2Q15784 382 aa30.76■■■□□ 2.51
CAPNS1-214ENST00000592483 SETDB2Q96T68 719 aa30.76■■■□□ 2.51
CAPNS1-214ENST00000592483 ARFGEF2Q9Y6D5 1785 aa30.75■■■□□ 2.51
CAPNS1-214ENST00000592483 ST5P78524 1137 aa30.75■■■□□ 2.51
CAPNS1-214ENST00000592483 CALD1Q05682 793 aaKnown RBP30.75■■■□□ 2.51
CAPNS1-214ENST00000592483 CCDC93Q567U6 631 aa30.75■■■□□ 2.51
CAPNS1-214ENST00000592483 TRIM35Q9UPQ4 493 aa30.75■■■□□ 2.51
CAPNS1-214ENST00000592483 TBC1D2BQ9UPU7 963 aa30.75■■■□□ 2.51
CAPNS1-214ENST00000592483 CACNA1SQ13698 1873 aa30.74■■■□□ 2.51
CAPNS1-214ENST00000592483 NPHP1O15259 732 aa30.74■■■□□ 2.51
CAPNS1-214ENST00000592483 CEMIPQ8WUJ3 1361 aa30.74■■■□□ 2.51
CAPNS1-214ENST00000592483 SCN7AQ01118 1682 aa30.72■■■□□ 2.51
CAPNS1-214ENST00000592483 ECE1P42892 770 aa30.72■■■□□ 2.51
CAPNS1-214ENST00000592483 FKBP4Q02790 459 aaKnown RBP eCLIP30.72■■■□□ 2.51
CAPNS1-214ENST00000592483 DDX21Q9NR30 783 aaKnown RBP eCLIP30.72■■■□□ 2.51
CAPNS1-214ENST00000592483 WWC1Q8IX03 1113 aa30.71■■■□□ 2.51
CAPNS1-214ENST00000592483 CAPNS2Q96L46 248 aa30.71■■■□□ 2.51
CAPNS1-214ENST00000592483 ZNF277Q9NRM2 450 aaPredicted RBP30.71■■■□□ 2.51
CAPNS1-214ENST00000592483 RNF123Q5XPI4 1314 aa30.71■■■□□ 2.51
CAPNS1-214ENST00000592483 ZBED9Q6R2W3 1325 aa30.71■■■□□ 2.51
CAPNS1-214ENST00000592483 THSD7BQ9C0I4 1608 aa30.7■■■□□ 2.51
CAPNS1-214ENST00000592483 UBR2Q8IWV8 1755 aa30.7■■■□□ 2.51
CAPNS1-214ENST00000592483 GPR101Q96P66 508 aaPredicted RBP30.7■■■□□ 2.51
CAPNS1-214ENST00000592483 IL6STP40189 918 aaPredicted RBP30.69■■■□□ 2.5
CAPNS1-214ENST00000592483 WDR63Q8IWG1 891 aa30.69■■■□□ 2.5
CAPNS1-214ENST00000592483 TTC5Q8N0Z6 440 aa30.69■■■□□ 2.5
CAPNS1-214ENST00000592483 IL17REQ8NFR9 667 aa30.69■■■□□ 2.5
CAPNS1-214ENST00000592483 TEX13AQ9BXU3 409 aaPredicted RBP30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms