RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 KDM2BQ8NHM5 1336 aa17.88■□□□□ 0.45
CAPNS1-213ENST00000592354 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
CAPNS1-213ENST00000592354 NFKBIEO00221 500 aa17.87■□□□□ 0.45
CAPNS1-213ENST00000592354 TOMM70O94826 608 aa17.87■□□□□ 0.45
CAPNS1-213ENST00000592354 NFE2L2Q16236 605 aa17.87■□□□□ 0.45
CAPNS1-213ENST00000592354 NUP98P52948 1817 aa17.86■□□□□ 0.45
CAPNS1-213ENST00000592354 C21orf2O43822 256 aa17.86■□□□□ 0.45
CAPNS1-213ENST00000592354 LMNB1P20700 586 aa17.86■□□□□ 0.45
CAPNS1-213ENST00000592354 C16orf71Q8IYS4 520 aaPredicted RBP17.86■□□□□ 0.45
CAPNS1-213ENST00000592354 ZNF652Q9Y2D9 606 aa17.86■□□□□ 0.45
CAPNS1-213ENST00000592354 NBPF5PQ86XG9 351 aaPredicted RBP17.85■□□□□ 0.45
CAPNS1-213ENST00000592354 FAM177BA6PVY3 158 aa17.84■□□□□ 0.45
CAPNS1-213ENST00000592354 NGEFQ8N5V2 710 aa17.84■□□□□ 0.45
CAPNS1-213ENST00000592354 RRAGCQ9HB90 399 aa17.84■□□□□ 0.45
CAPNS1-213ENST00000592354 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
CAPNS1-213ENST00000592354 DDX10Q13206 875 aaKnown RBP17.83■□□□□ 0.44
CAPNS1-213ENST00000592354 CLEC4GQ6UXB4 293 aa17.83■□□□□ 0.44
CAPNS1-213ENST00000592354 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.44
CAPNS1-213ENST00000592354 PDZRN3Q9UPQ7 1066 aa17.83■□□□□ 0.44
CAPNS1-213ENST00000592354 NIP7Q9Y221 180 aaKnown RBP eCLIP17.83■□□□□ 0.44
CAPNS1-213ENST00000592354 SRGNP10124 158 aa17.82■□□□□ 0.44
CAPNS1-213ENST00000592354 EIF4A1P60842 406 aaKnown RBP17.82■□□□□ 0.44
CAPNS1-213ENST00000592354 HLFQ16534 295 aa17.82■□□□□ 0.44
CAPNS1-213ENST00000592354 PRPF40BQ6NWY9 871 aaKnown RBP17.82■□□□□ 0.44
CAPNS1-213ENST00000592354 RBM46Q8TBY0 533 aaKnown RBP17.82■□□□□ 0.44
CAPNS1-213ENST00000592354 RALBP1Q15311 655 aa17.81■□□□□ 0.44
CAPNS1-213ENST00000592354 STYK1Q6J9G0 422 aa17.81■□□□□ 0.44
CAPNS1-213ENST00000592354 PNNQ9H307 717 aaKnown RBP17.81■□□□□ 0.44
CAPNS1-213ENST00000592354 MYL6BP14649 208 aa17.8■□□□□ 0.44
CAPNS1-213ENST00000592354 APLP1P51693 650 aa17.8■□□□□ 0.44
CAPNS1-213ENST00000592354 CNKSR1Q969H4 720 aa17.8■□□□□ 0.44
CAPNS1-213ENST00000592354 MASTLQ96GX5 879 aa17.8■□□□□ 0.44
CAPNS1-213ENST00000592354 RRP7AQ9Y3A4 280 aaKnown RBP17.8■□□□□ 0.44
CAPNS1-213ENST00000592354 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
CAPNS1-213ENST00000592354 MYBBP1AQ9BQG0 1328 aaKnown RBP17.79■□□□□ 0.44
CAPNS1-213ENST00000592354 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
CAPNS1-213ENST00000592354 GLTPD2A6NH11 291 aa17.78■□□□□ 0.44
CAPNS1-213ENST00000592354 RIPK4P57078 832 aa17.78■□□□□ 0.44
CAPNS1-213ENST00000592354 TTLL7Q6ZT98 887 aa17.78■□□□□ 0.44
CAPNS1-213ENST00000592354 CCDC146Q8IYE0 955 aa17.78■□□□□ 0.44
CAPNS1-213ENST00000592354 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
CAPNS1-213ENST00000592354 TSPYL4Q9UJ04 414 aa17.78■□□□□ 0.44
CAPNS1-213ENST00000592354 MAP3K15Q6ZN16 1313 aa17.77■□□□□ 0.44
CAPNS1-213ENST00000592354 RGL2O15211 777 aa17.77■□□□□ 0.44
CAPNS1-213ENST00000592354 HTRA3P83110 453 aa17.77■□□□□ 0.44
CAPNS1-213ENST00000592354 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
CAPNS1-213ENST00000592354 TPTE2Q6XPS3 522 aa17.77■□□□□ 0.44
CAPNS1-213ENST00000592354 KIF6Q6ZMV9 814 aa17.77■□□□□ 0.44
CAPNS1-213ENST00000592354 ZBTB3Q9H5J0 574 aa17.77■□□□□ 0.44
CAPNS1-213ENST00000592354 LTBP3Q9NS15 1303 aa17.76■□□□□ 0.43
CAPNS1-213ENST00000592354 FSTL1Q12841 308 aa17.76■□□□□ 0.43
CAPNS1-213ENST00000592354 NUTM1Q86Y26 1132 aa17.76■□□□□ 0.43
CAPNS1-213ENST00000592354 NPR1P16066 1061 aa17.75■□□□□ 0.43
CAPNS1-213ENST00000592354 GPTP24298 496 aa17.75■□□□□ 0.43
CAPNS1-213ENST00000592354 GTF2E1P29083 439 aaPredicted RBP17.75■□□□□ 0.43
CAPNS1-213ENST00000592354 TMPOP42166 694 aaKnown RBP17.75■□□□□ 0.43
CAPNS1-213ENST00000592354 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
CAPNS1-213ENST00000592354 OLFM4Q6UX06 510 aa17.75■□□□□ 0.43
CAPNS1-213ENST00000592354 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
CAPNS1-213ENST00000592354 CCDC93Q567U6 631 aa17.74■□□□□ 0.43
CAPNS1-213ENST00000592354 SOGA3Q5TF21 947 aa17.74■□□□□ 0.43
CAPNS1-213ENST00000592354 SMC1BQ8NDV3 1235 aa17.74■□□□□ 0.43
CAPNS1-213ENST00000592354 ERVV-1B6SEH8 477 aa17.73■□□□□ 0.43
CAPNS1-213ENST00000592354 VEGFAP15692 232 aaPredicted RBP17.73■□□□□ 0.43
CAPNS1-213ENST00000592354 EIF2S2P20042 333 aaKnown RBP17.73■□□□□ 0.43
CAPNS1-213ENST00000592354 LMOD3Q0VAK6 560 aa17.73■□□□□ 0.43
CAPNS1-213ENST00000592354 LAMB2P55268 1798 aa17.73■□□□□ 0.43
CAPNS1-213ENST00000592354 KLRG2A4D1S0 409 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-213ENST00000592354 ANXA1P04083 346 aa17.72■□□□□ 0.43
CAPNS1-213ENST00000592354 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
CAPNS1-213ENST00000592354 PROSER3Q2NL68 480 aa17.72■□□□□ 0.43
CAPNS1-213ENST00000592354 DPY19L2Q6NUT2 758 aa17.72■□□□□ 0.43
CAPNS1-213ENST00000592354 C7orf43Q8WVR3 580 aa17.72■□□□□ 0.43
CAPNS1-213ENST00000592354 NECTIN2Q92692 538 aa17.72■□□□□ 0.43
CAPNS1-213ENST00000592354 NYXQ9GZU5 481 aa17.72■□□□□ 0.43
CAPNS1-213ENST00000592354 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
CAPNS1-213ENST00000592354 IBTKQ9P2D0 1353 aaPredicted RBP17.71■□□□□ 0.43
CAPNS1-213ENST00000592354 POTECB2RU33 542 aa17.7■□□□□ 0.42
CAPNS1-213ENST00000592354 DDNO94850 711 aaPredicted RBP17.7■□□□□ 0.42
CAPNS1-213ENST00000592354 FKBP4Q02790 459 aaKnown RBP eCLIP17.7■□□□□ 0.42
CAPNS1-213ENST00000592354 KRT24Q2M2I5 525 aa17.7■□□□□ 0.42
CAPNS1-213ENST00000592354 SUSD4Q5VX71 490 aa17.7■□□□□ 0.42
CAPNS1-213ENST00000592354 DNAJC5GQ8N7S2 189 aa17.7■□□□□ 0.42
CAPNS1-213ENST00000592354 ZNF277Q9NRM2 450 aaPredicted RBP17.7■□□□□ 0.42
CAPNS1-213ENST00000592354 RIC1Q4ADV7 1423 aa17.7■□□□□ 0.42
CAPNS1-213ENST00000592354 PDIA6Q15084 440 aa17.69■□□□□ 0.42
CAPNS1-213ENST00000592354 LRP10Q7Z4F1 713 aa17.69■□□□□ 0.42
CAPNS1-213ENST00000592354 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
CAPNS1-213ENST00000592354 SNED1Q8TER0 1413 aa17.69■□□□□ 0.42
CAPNS1-213ENST00000592354 SCN4AP35499 1836 aa17.68■□□□□ 0.42
CAPNS1-213ENST00000592354 NTSR2O95665 410 aa17.68■□□□□ 0.42
CAPNS1-213ENST00000592354 CRY2Q49AN0 593 aa17.68■□□□□ 0.42
CAPNS1-213ENST00000592354 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
CAPNS1-213ENST00000592354 SLC51AQ86UW1 340 aa17.68■□□□□ 0.42
CAPNS1-213ENST00000592354 ZNF34Q8IZ26 560 aa17.68■□□□□ 0.42
CAPNS1-213ENST00000592354 RUNDC1Q96C34 613 aa17.68■□□□□ 0.42
CAPNS1-213ENST00000592354 ZNF541Q9H0D2 1346 aa17.68■□□□□ 0.42
CAPNS1-213ENST00000592354 COL4A5P29400 1685 aa17.67■□□□□ 0.42
CAPNS1-213ENST00000592354 ALDH1B1P30837 517 aa17.67■□□□□ 0.42
CAPNS1-213ENST00000592354 RPGRQ92834 1020 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms