RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 NBPF26B4DH59 902 aa24.95■■□□□ 1.58
CCDC43-205ENST00000592333 NFKBIEO00221 500 aa24.95■■□□□ 1.58
CCDC43-205ENST00000592333 SRGNP10124 158 aa24.95■■□□□ 1.58
CCDC43-205ENST00000592333 NBPF10Q6P3W6 841 aaKnown RBP24.95■■□□□ 1.58
CCDC43-205ENST00000592333 TPTE2Q6XPS3 522 aa24.95■■□□□ 1.58
CCDC43-205ENST00000592333 NBPF15Q8N660 670 aa24.95■■□□□ 1.58
CCDC43-205ENST00000592333 MASTLQ96GX5 879 aa24.95■■□□□ 1.58
CCDC43-205ENST00000592333 MAPK8IP3Q9UPT6 1336 aa24.94■■□□□ 1.58
CCDC43-205ENST00000592333 NBPF5PQ86XG9 351 aaPredicted RBP24.94■■□□□ 1.58
CCDC43-205ENST00000592333 KLRG2A4D1S0 409 aaPredicted RBP24.93■■□□□ 1.58
CCDC43-205ENST00000592333 RRAGCQ9HB90 399 aa24.93■■□□□ 1.58
CCDC43-205ENST00000592333 DLG5Q8TDM6 1919 aa24.92■■□□□ 1.58
CCDC43-205ENST00000592333 LAMB4A4D0S4 1761 aa24.92■■□□□ 1.58
CCDC43-205ENST00000592333 KDM3BQ7LBC6 1761 aa24.92■■□□□ 1.58
CCDC43-205ENST00000592333 ERVV-1B6SEH8 477 aa24.91■■□□□ 1.58
CCDC43-205ENST00000592333 VEGFAP15692 232 aaPredicted RBP24.91■■□□□ 1.58
CCDC43-205ENST00000592333 PIP4K2AP48426 406 aaPredicted RBP24.91■■□□□ 1.58
CCDC43-205ENST00000592333 PRELPP51888 382 aa24.91■■□□□ 1.58
CCDC43-205ENST00000592333 DPY19L2Q6NUT2 758 aa24.91■■□□□ 1.58
CCDC43-205ENST00000592333 COL11A2P13942 1736 aaPredicted RBP24.91■■□□□ 1.58
CCDC43-205ENST00000592333 C21orf2O43822 256 aa24.9■■□□□ 1.58
CCDC43-205ENST00000592333 EIF4A1P60842 406 aaKnown RBP24.9■■□□□ 1.58
CCDC43-205ENST00000592333 BABAM1Q9NWV8 329 aa24.9■■□□□ 1.58
CCDC43-205ENST00000592333 MIS18AQ9NYP9 233 aa24.9■■□□□ 1.58
CCDC43-205ENST00000592333 NIP7Q9Y221 180 aaKnown RBP eCLIP24.9■■□□□ 1.58
CCDC43-205ENST00000592333 FER1L6Q2WGJ9 1857 aa24.89■■□□□ 1.58
CCDC43-205ENST00000592333 SMC1BQ8NDV3 1235 aa24.89■■□□□ 1.58
CCDC43-205ENST00000592333 ARFGEF2Q9Y6D5 1785 aa24.89■■□□□ 1.57
CCDC43-205ENST00000592333 ERBB4Q15303 1308 aa24.88■■□□□ 1.57
CCDC43-205ENST00000592333 NPR1P16066 1061 aa24.88■■□□□ 1.57
CCDC43-205ENST00000592333 PRPF40BQ6NWY9 871 aaKnown RBP24.88■■□□□ 1.57
CCDC43-205ENST00000592333 CCDC24Q8N4L8 307 aa24.88■■□□□ 1.57
CCDC43-205ENST00000592333 TAOK3Q9H2K8 898 aa24.88■■□□□ 1.57
CCDC43-205ENST00000592333 DNAJC5GQ8N7S2 189 aa24.87■■□□□ 1.57
CCDC43-205ENST00000592333 NYXQ9GZU5 481 aa24.86■■□□□ 1.57
CCDC43-205ENST00000592333 DICER1Q9UPY3 1922 aaKnown RBP24.86■■□□□ 1.57
CCDC43-205ENST00000592333 TIAM2Q8IVF5 1701 aa24.86■■□□□ 1.57
CCDC43-205ENST00000592333 CCDC88AQ3V6T2 1871 aa24.85■■□□□ 1.57
CCDC43-205ENST00000592333 LMOD3Q0VAK6 560 aa24.85■■□□□ 1.57
CCDC43-205ENST00000592333 ERFEQ4G0M1 354 aa24.85■■□□□ 1.57
CCDC43-205ENST00000592333 C7orf43Q8WVR3 580 aa24.85■■□□□ 1.57
CCDC43-205ENST00000592333 SLX4Q8IY92 1834 aa24.84■■□□□ 1.57
CCDC43-205ENST00000592333 MAP3K15Q6ZN16 1313 aa24.84■■□□□ 1.57
CCDC43-205ENST00000592333 ALDH1B1P30837 517 aa24.83■■□□□ 1.57
CCDC43-205ENST00000592333 HLFQ16534 295 aa24.83■■□□□ 1.57
CCDC43-205ENST00000592333 KIF6Q6ZMV9 814 aa24.83■■□□□ 1.57
CCDC43-205ENST00000592333 WDR90Q96KV7 1748 aa24.83■■□□□ 1.57
CCDC43-205ENST00000592333 IBTKQ9P2D0 1353 aaPredicted RBP24.82■■□□□ 1.56
CCDC43-205ENST00000592333 GTF2E1P29083 439 aaPredicted RBP24.82■■□□□ 1.56
CCDC43-205ENST00000592333 CCDC93Q567U6 631 aa24.82■■□□□ 1.56
CCDC43-205ENST00000592333 RIPK4P57078 832 aa24.81■■□□□ 1.56
CCDC43-205ENST00000592333 THUMPD2Q9BTF0 503 aaKnown RBP24.81■■□□□ 1.56
CCDC43-205ENST00000592333 ZNF219Q9P2Y4 722 aaPredicted RBP24.81■■□□□ 1.56
CCDC43-205ENST00000592333 MYBBP1AQ9BQG0 1328 aaKnown RBP24.81■■□□□ 1.56
CCDC43-205ENST00000592333 RIC1Q4ADV7 1423 aa24.8■■□□□ 1.56
CCDC43-205ENST00000592333 CRY2Q49AN0 593 aa24.8■■□□□ 1.56
CCDC43-205ENST00000592333 RTKN2Q8IZC4 609 aa24.8■■□□□ 1.56
CCDC43-205ENST00000592333 TSPYL4Q9UJ04 414 aa24.8■■□□□ 1.56
CCDC43-205ENST00000592333 RRP7AQ9Y3A4 280 aaKnown RBP24.8■■□□□ 1.56
CCDC43-205ENST00000592333 POTECB2RU33 542 aa24.78■■□□□ 1.56
CCDC43-205ENST00000592333 TMPOP42166 694 aaKnown RBP24.78■■□□□ 1.56
CCDC43-205ENST00000592333 NUP98P52948 1817 aa24.77■■□□□ 1.56
CCDC43-205ENST00000592333 FKBP4Q02790 459 aaKnown RBP eCLIP24.77■■□□□ 1.56
CCDC43-205ENST00000592333 GRIPAP1Q4V328 841 aa24.77■■□□□ 1.56
CCDC43-205ENST00000592333 CC2D2BQ6DHV5 1058 aa24.77■■□□□ 1.56
CCDC43-205ENST00000592333 GIGYF2Q6Y7W6 1299 aaKnown RBP24.77■■□□□ 1.56
CCDC43-205ENST00000592333 TTLL7Q6ZT98 887 aa24.76■■□□□ 1.55
CCDC43-205ENST00000592333 ZNF34Q8IZ26 560 aa24.76■■□□□ 1.55
CCDC43-205ENST00000592333 NGEFQ8N5V2 710 aa24.76■■□□□ 1.55
CCDC43-205ENST00000592333 KLRG1Q96E93 195 aa24.76■■□□□ 1.55
CCDC43-205ENST00000592333 CACNA1SQ13698 1873 aa24.75■■□□□ 1.55
CCDC43-205ENST00000592333 MYL6BP14649 208 aa24.75■■□□□ 1.55
CCDC43-205ENST00000592333 DDX10Q13206 875 aaKnown RBP24.75■■□□□ 1.55
CCDC43-205ENST00000592333 PARP10Q53GL7 1025 aa24.75■■□□□ 1.55
CCDC43-205ENST00000592333 FAM177BA6PVY3 158 aa24.74■■□□□ 1.55
CCDC43-205ENST00000592333 HOXA10P31260 410 aaPredicted RBP24.74■■□□□ 1.55
CCDC43-205ENST00000592333 IFFO2Q5TF58 517 aa24.74■■□□□ 1.55
CCDC43-205ENST00000592333 JMYQ8N9B5 988 aa24.74■■□□□ 1.55
CCDC43-205ENST00000592333 IQCA1LA6NCM1 817 aa24.73■■□□□ 1.55
CCDC43-205ENST00000592333 PPP1R42Q7Z4L9 355 aa24.73■■□□□ 1.55
CCDC43-205ENST00000592333 L3MBTL3Q96JM7 780 aaPredicted RBP24.73■■□□□ 1.55
CCDC43-205ENST00000592333 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
CCDC43-205ENST00000592333 PDIA6Q15084 440 aa24.72■■□□□ 1.55
CCDC43-205ENST00000592333 LRP10Q7Z4F1 713 aa24.72■■□□□ 1.55
CCDC43-205ENST00000592333 RUNDC1Q96C34 613 aa24.72■■□□□ 1.55
CCDC43-205ENST00000592333 PSMD1Q99460 953 aa24.72■■□□□ 1.55
CCDC43-205ENST00000592333 ZBTB3Q9H5J0 574 aa24.72■■□□□ 1.55
CCDC43-205ENST00000592333 UBN2Q6ZU65 1347 aa24.7■■□□□ 1.54
CCDC43-205ENST00000592333 CHL1O00533 1208 aa24.7■■□□□ 1.54
CCDC43-205ENST00000592333 SUSD4Q5VX71 490 aa24.7■■□□□ 1.54
CCDC43-205ENST00000592333 CRAMP1Q96RY5 1269 aa24.7■■□□□ 1.54
CCDC43-205ENST00000592333 ABCC12Q96J65 1359 aa24.69■■□□□ 1.54
CCDC43-205ENST00000592333 DDNO94850 711 aaPredicted RBP24.69■■□□□ 1.54
CCDC43-205ENST00000592333 WDR43Q15061 677 aaKnown RBP eCLIP24.69■■□□□ 1.54
CCDC43-205ENST00000592333 HSP90AB3PQ58FF7 597 aa24.69■■□□□ 1.54
CCDC43-205ENST00000592333 NUTM1Q86Y26 1132 aa24.69■■□□□ 1.54
CCDC43-205ENST00000592333 RPGRQ92834 1020 aaKnown RBP24.69■■□□□ 1.54
CCDC43-205ENST00000592333 NTSR2O95665 410 aa24.68■■□□□ 1.54
CCDC43-205ENST00000592333 SLC10A5Q5PT55 438 aa24.68■■□□□ 1.54
CCDC43-205ENST00000592333 RBM17Q96I25 401 aaKnown RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms