RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 SRCIN1Q9C0H9 1055 aa21.35■■□□□ 1.01
GCDH-212ENST00000590530 USP44Q9H0E7 712 aa21.35■■□□□ 1.01
GCDH-212ENST00000590530 ZBTB3Q9H5J0 574 aa21.35■■□□□ 1.01
GCDH-212ENST00000590530 IGKV5-2P06315 115 aa21.34■■□□□ 1.01
GCDH-212ENST00000590530 MYD88Q99836 296 aa21.33■■□□□ 1.01
GCDH-212ENST00000590530 SIRT2Q8IXJ6 389 aa21.32■■□□□ 1
GCDH-212ENST00000590530 PLBD2Q8NHP8 589 aa21.32■■□□□ 1
GCDH-212ENST00000590530 CCDC87Q9NVE4 849 aa21.32■■□□□ 1
GCDH-212ENST00000590530 ARXQ96QS3 562 aa21.32■■□□□ 1
GCDH-212ENST00000590530 METTL22Q9BUU2 404 aaPredicted RBP21.32■■□□□ 1
GCDH-212ENST00000590530 ATP10DQ9P241 1426 aa21.31■■□□□ 1
GCDH-212ENST00000590530 ATP5J2-PTCD1G3V325 749 aa21.31■■□□□ 1
GCDH-212ENST00000590530 NBPF7P0C2Y1 421 aaPredicted RBP21.31■■□□□ 1
GCDH-212ENST00000590530 LRRC4BQ9NT99 713 aa21.31■■□□□ 1
GCDH-212ENST00000590530 CCNL1Q9UK58 526 aaPredicted RBP21.31■■□□□ 1
GCDH-212ENST00000590530 MYH14Q7Z406 1995 aaKnown RBP21.29■■□□□ 1
GCDH-212ENST00000590530 EIF5P55010 431 aaKnown RBP21.29■■□□□ 1
GCDH-212ENST00000590530 LINS1Q8NG48 757 aa21.29■■□□□ 1
GCDH-212ENST00000590530 JARID2Q92833 1246 aaPredicted RBP21.29■■□□□ 1
GCDH-212ENST00000590530 TBC1D2BQ9UPU7 963 aa21.29■■□□□ 1
GCDH-212ENST00000590530 HLFQ16534 295 aa21.28■■□□□ 1
GCDH-212ENST00000590530 AMIGO3Q86WK7 504 aa21.28■■□□□ 1
GCDH-212ENST00000590530 NEURL1BA8MQ27 555 aa21.28■■□□□ 1
GCDH-212ENST00000590530 IL6STP40189 918 aaPredicted RBP21.28■■□□□ 1
GCDH-212ENST00000590530 CICQ96RK0 1608 aaPredicted RBP21.27■■□□□ 1
GCDH-212ENST00000590530 PROM2Q8N271 834 aa21.26■□□□□ 0.99
GCDH-212ENST00000590530 LRRFIP2Q9Y608 721 aaKnown RBP21.26■□□□□ 0.99
GCDH-212ENST00000590530 ALDH1L1O75891 902 aa21.26■□□□□ 0.99
GCDH-212ENST00000590530 CEP85Q6P2H3 762 aa21.26■□□□□ 0.99
GCDH-212ENST00000590530 COL5A3P25940 1745 aaPredicted RBP21.26■□□□□ 0.99
GCDH-212ENST00000590530 ARFGEF2Q9Y6D5 1785 aa21.25■□□□□ 0.99
GCDH-212ENST00000590530 DZIP3Q86Y13 1208 aaKnown RBP21.25■□□□□ 0.99
GCDH-212ENST00000590530 SMC5Q8IY18 1101 aa21.25■□□□□ 0.99
GCDH-212ENST00000590530 MAP3K15Q6ZN16 1313 aa21.25■□□□□ 0.99
GCDH-212ENST00000590530 LY75O60449 1722 aa21.25■□□□□ 0.99
GCDH-212ENST00000590530 UBTFL1P0CB47 393 aaPredicted RBP21.24■□□□□ 0.99
GCDH-212ENST00000590530 NEXNQ0ZGT2 675 aa21.24■□□□□ 0.99
GCDH-212ENST00000590530 GCKRQ14397 625 aa21.24■□□□□ 0.99
GCDH-212ENST00000590530 NUP188Q5SRE5 1749 aa21.24■□□□□ 0.99
GCDH-212ENST00000590530 RREB1Q92766 1687 aa21.24■□□□□ 0.99
GCDH-212ENST00000590530 GNAI2P04899 355 aa21.24■□□□□ 0.99
GCDH-212ENST00000590530 GNAI3P08754 354 aa21.24■□□□□ 0.99
GCDH-212ENST00000590530 KIF6Q6ZMV9 814 aa21.24■□□□□ 0.99
GCDH-212ENST00000590530 ZNF831Q5JPB2 1677 aa21.23■□□□□ 0.99
GCDH-212ENST00000590530 C9orf78Q9NZ63 289 aaPredicted RBP21.23■□□□□ 0.99
GCDH-212ENST00000590530 RBM19Q9Y4C8 960 aaKnown RBP21.23■□□□□ 0.99
GCDH-212ENST00000590530 CNTNAP4Q9C0A0 1308 aa21.23■□□□□ 0.99
GCDH-212ENST00000590530 GRM8O00222 908 aa21.22■□□□□ 0.99
GCDH-212ENST00000590530 APBA3O96018 575 aa21.22■□□□□ 0.99
GCDH-212ENST00000590530 ANKRD44Q8N8A2 993 aa21.22■□□□□ 0.99
GCDH-212ENST00000590530 KAZALD1Q96I82 304 aa21.22■□□□□ 0.99
GCDH-212ENST00000590530 TCIRG1Q13488 830 aa21.22■□□□□ 0.99
GCDH-212ENST00000590530 PDZRN3Q9UPQ7 1066 aa21.22■□□□□ 0.99
GCDH-212ENST00000590530 PNMA6EA0A0J9YXQ4 647 aa21.21■□□□□ 0.99
GCDH-212ENST00000590530 RTL5Q5HYW3 569 aaPredicted RBP21.21■□□□□ 0.99
GCDH-212ENST00000590530 SUCLG2Q96I99 432 aa21.21■□□□□ 0.99
GCDH-212ENST00000590530 GNPATO15228 680 aa21.2■□□□□ 0.98
GCDH-212ENST00000590530 GPTP24298 496 aa21.2■□□□□ 0.98
GCDH-212ENST00000590530 GIGYF2Q6Y7W6 1299 aaKnown RBP21.2■□□□□ 0.98
GCDH-212ENST00000590530 ISCA1Q9BUE6 129 aa21.2■□□□□ 0.98
GCDH-212ENST00000590530 COL15A1P39059 1388 aa21.2■□□□□ 0.98
GCDH-212ENST00000590530 CAMTA2O94983 1202 aa21.2■□□□□ 0.98
GCDH-212ENST00000590530 TXNRD1Q16881 649 aa21.2■□□□□ 0.98
GCDH-212ENST00000590530 UTYO14607 1347 aa21.19■□□□□ 0.98
GCDH-212ENST00000590530 RGS3P49796 1198 aa21.19■□□□□ 0.98
GCDH-212ENST00000590530 EPHA10Q5JZY3 1008 aa21.19■□□□□ 0.98
GCDH-212ENST00000590530 RC3H1Q5TC82 1133 aaKnown RBP21.19■□□□□ 0.98
GCDH-212ENST00000590530 RPAP2Q8IXW5 612 aaPredicted RBP21.19■□□□□ 0.98
GCDH-212ENST00000590530 GCC1Q96CN9 775 aa21.19■□□□□ 0.98
GCDH-212ENST00000590530 A0A087WZG4 1122 aa21.18■□□□□ 0.98
GCDH-212ENST00000590530 RPS6KA4O75676 772 aa21.18■□□□□ 0.98
GCDH-212ENST00000590530 UBE3BQ7Z3V4 1068 aa21.18■□□□□ 0.98
GCDH-212ENST00000590530 CASP7P55210 303 aa21.18■□□□□ 0.98
GCDH-212ENST00000590530 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
GCDH-212ENST00000590530 ERVV-1B6SEH8 477 aa21.17■□□□□ 0.98
GCDH-212ENST00000590530 ATP8B2P98198 1209 aa21.17■□□□□ 0.98
GCDH-212ENST00000590530 SYNE4Q8N205 404 aa21.17■□□□□ 0.98
GCDH-212ENST00000590530 CWC25Q9NXE8 425 aaPredicted RBP21.17■□□□□ 0.98
GCDH-212ENST00000590530 TAF1LQ8IZX4 1826 aa21.16■□□□□ 0.98
GCDH-212ENST00000590530 SRP68Q9UHB9 627 aaKnown RBP21.16■□□□□ 0.98
GCDH-212ENST00000590530 PLSCR1O15162 318 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 PHF14O94880 888 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 C4BP0C0L5 1744 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 PDE4AP27815 886 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 SLC27A3Q5K4L6 730 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 UBN2Q6ZU65 1347 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 PPP1R42Q7Z4L9 355 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 BICC1Q9H694 974 aaKnown RBP21.15■□□□□ 0.98
GCDH-212ENST00000590530 IBTKQ9P2D0 1353 aaPredicted RBP21.15■□□□□ 0.98
GCDH-212ENST00000590530 H7C1W4 665 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 CCDC191Q8NCU4 936 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 BACH2Q9BYV9 841 aa21.15■□□□□ 0.98
GCDH-212ENST00000590530 NUCB1Q02818 461 aa21.14■□□□□ 0.97
GCDH-212ENST00000590530 NLRP10Q86W26 655 aa21.14■□□□□ 0.97
GCDH-212ENST00000590530 ARHGEF1Q92888 912 aaKnown RBP21.14■□□□□ 0.97
GCDH-212ENST00000590530 BCL2L12Q9HB09 334 aa21.14■□□□□ 0.97
GCDH-212ENST00000590530 RTCBQ9Y3I0 505 aaKnown RBP21.14■□□□□ 0.97
GCDH-212ENST00000590530 AFDNP55196 1824 aaKnown RBP21.14■□□□□ 0.97
GCDH-212ENST00000590530 TRIM28Q13263 835 aaKnown RBP21.13■□□□□ 0.97
GCDH-212ENST00000590530 ZNF34Q8IZ26 560 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms