RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-223	ENST00000589266	TSPYL6	Q8N831	410 aa		32.23	■■■□□ 2.75
CIRBP-223	ENST00000589266	PTCD1	O75127	700 aa	Known RBP	32.22	■■■□□ 2.75
CIRBP-223	ENST00000589266	KRT24	Q2M2I5	525 aa		32.22	■■■□□ 2.75
CIRBP-223	ENST00000589266	KDM2B	Q8NHM5	1336 aa		32.22	■■■□□ 2.75
CIRBP-223	ENST00000589266	COL5A3	P25940	1745 aa	Predicted RBP	32.21	■■■□□ 2.75
CIRBP-223	ENST00000589266	HTRA3	P83110	453 aa		32.21	■■■□□ 2.75
CIRBP-223	ENST00000589266	DALRD3	Q5D0E6	543 aa	Known RBP	32.2	■■■□□ 2.75
CIRBP-223	ENST00000589266	JMY	Q8N9B5	988 aa		32.2	■■■□□ 2.75
CIRBP-223	ENST00000589266	ELL2	O00472	640 aa	Predicted RBP	32.19	■■■□□ 2.74
CIRBP-223	ENST00000589266	MYH14	Q7Z406	1995 aa	Known RBP	32.19	■■■□□ 2.74
CIRBP-223	ENST00000589266	LAMB4	A4D0S4	1761 aa		32.18	■■■□□ 2.74
CIRBP-223	ENST00000589266	ALDH1L2	Q3SY69	923 aa		32.17	■■■□□ 2.74
CIRBP-223	ENST00000589266	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.17	■■■□□ 2.74
CIRBP-223	ENST00000589266	RNF181	Q9P0P0	153 aa		32.17	■■■□□ 2.74
CIRBP-223	ENST00000589266	CCDC30	Q5VVM6	783 aa		32.15	■■■□□ 2.74
CIRBP-223	ENST00000589266	RRAGC	Q9HB90	399 aa		32.15	■■■□□ 2.74
CIRBP-223	ENST00000589266	RCAN3	Q9UKA8	241 aa		32.15	■■■□□ 2.74
CIRBP-223	ENST00000589266	HDGFL1	Q5TGJ6	251 aa		32.14	■■■□□ 2.74
CIRBP-223	ENST00000589266	ERBB4	Q15303	1308 aa		32.14	■■■□□ 2.74
CIRBP-223	ENST00000589266	TJP1	Q07157	1748 aa		32.14	■■■□□ 2.74
CIRBP-223	ENST00000589266	STARD3NL	O95772	234 aa		32.13	■■■□□ 2.73
CIRBP-223	ENST00000589266	RARS	P54136	660 aa	Known RBP	32.12	■■■□□ 2.73
CIRBP-223	ENST00000589266	FKBP8	Q14318	412 aa		32.12	■■■□□ 2.73
CIRBP-223	ENST00000589266	SRP68	Q9UHB9	627 aa	Known RBP	32.12	■■■□□ 2.73
CIRBP-223	ENST00000589266	CACNA1F	O60840	1977 aa		32.12	■■■□□ 2.73
CIRBP-223	ENST00000589266	PRAMEF22	A3QJZ6	481 aa		32.11	■■■□□ 2.73
CIRBP-223	ENST00000589266	CRKL	P46109	303 aa	Known RBP	32.11	■■■□□ 2.73
CIRBP-223	ENST00000589266	BRPF1	P55201	1214 aa	Predicted RBP	32.11	■■■□□ 2.73
CIRBP-223	ENST00000589266	DNAJC10	Q8IXB1	793 aa		32.11	■■■□□ 2.73
CIRBP-223	ENST00000589266	USP16	Q9Y5T5	823 aa		32.11	■■■□□ 2.73
CIRBP-223	ENST00000589266	USP42	Q9H9J4	1324 aa	Known RBP	32.1	■■■□□ 2.73
CIRBP-223	ENST00000589266	DDR1	Q08345	913 aa		32.1	■■■□□ 2.73
CIRBP-223	ENST00000589266	EIF2S2	P20042	333 aa	Known RBP	32.09	■■■□□ 2.73
CIRBP-223	ENST00000589266	CHRNA5	P30532	468 aa		32.09	■■■□□ 2.73
CIRBP-223	ENST00000589266	SMC1B	Q8NDV3	1235 aa		32.09	■■■□□ 2.73
CIRBP-223	ENST00000589266	STK31	Q9BXU1	1019 aa		32.09	■■■□□ 2.73
CIRBP-223	ENST00000589266	SBF1	O95248	1867 aa		32.09	■■■□□ 2.73
CIRBP-223	ENST00000589266	DBF4	Q9UBU7	674 aa	Predicted RBP	32.08	■■■□□ 2.73
CIRBP-223	ENST00000589266	PCNT	O95613	3336 aa		32.08	■■■□□ 2.73
CIRBP-223	ENST00000589266	CYP19A1	P11511	503 aa	Predicted RBP	32.07	■■■□□ 2.72
CIRBP-223	ENST00000589266	SSH1	Q8WYL5	1049 aa		32.07	■■■□□ 2.72
CIRBP-223	ENST00000589266	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.07	■■■□□ 2.72
CIRBP-223	ENST00000589266	TNS4	Q8IZW8	715 aa		32.05	■■■□□ 2.72
CIRBP-223	ENST00000589266	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.05	■■■□□ 2.72
CIRBP-223	ENST00000589266	CAPN15	O75808	1086 aa		32.04	■■■□□ 2.72
CIRBP-223	ENST00000589266	SMC4	Q9NTJ3	1288 aa		32.04	■■■□□ 2.72
CIRBP-223	ENST00000589266	POLRMT	O00411	1230 aa	Known RBP	32.03	■■■□□ 2.72
CIRBP-223	ENST00000589266	TM4SF1	P30408	202 aa		32.03	■■■□□ 2.72
CIRBP-223	ENST00000589266	MRPL50	Q8N5N7	158 aa	Known RBP	32.03	■■■□□ 2.72
CIRBP-223	ENST00000589266	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.02	■■■□□ 2.72
CIRBP-223	ENST00000589266	HYPK	Q9NX55	129 aa		32.01	■■■□□ 2.71
CIRBP-223	ENST00000589266	CHPF2	Q9P2E5	772 aa		32.01	■■■□□ 2.71
CIRBP-223	ENST00000589266	ZPR1	O75312	459 aa		32	■■■□□ 2.71
CIRBP-223	ENST00000589266	SLC4A2	P04920	1241 aa		32	■■■□□ 2.71
CIRBP-223	ENST00000589266	PDIA6	Q15084	440 aa		32	■■■□□ 2.71
CIRBP-223	ENST00000589266	NECTIN2	Q92692	538 aa		32	■■■□□ 2.71
CIRBP-223	ENST00000589266	KIF16B	Q96L93	1317 aa		32	■■■□□ 2.71
CIRBP-223	ENST00000589266	INTS5	Q6P9B9	1019 aa	Known RBP	31.99	■■■□□ 2.71
CIRBP-223	ENST00000589266	BCAR3	O75815	825 aa		31.98	■■■□□ 2.71
CIRBP-223	ENST00000589266	A1BG	P04217	495 aa		31.98	■■■□□ 2.71
CIRBP-223	ENST00000589266	PRELP	P51888	382 aa		31.97	■■■□□ 2.71
CIRBP-223	ENST00000589266	NBPF26	B4DH59	902 aa		31.96	■■■□□ 2.71
CIRBP-223	ENST00000589266	VEGFA	P15692	232 aa	Predicted RBP	31.96	■■■□□ 2.71
CIRBP-223	ENST00000589266	LMNB1	P20700	586 aa		31.96	■■■□□ 2.71
CIRBP-223	ENST00000589266	RASSF7	Q02833	373 aa		31.96	■■■□□ 2.71
CIRBP-223	ENST00000589266	USPL1	Q5W0Q7	1092 aa		31.96	■■■□□ 2.71
CIRBP-223	ENST00000589266	NBPF10	Q6P3W6	841 aa	Known RBP	31.96	■■■□□ 2.71
CIRBP-223	ENST00000589266	NBPF15	Q8N660	670 aa		31.96	■■■□□ 2.71
CIRBP-223	ENST00000589266	BCL2L13	Q9BXK5	485 aa		31.96	■■■□□ 2.71
CIRBP-223	ENST00000589266	GLTPD2	A6NH11	291 aa		31.95	■■■□□ 2.71
CIRBP-223	ENST00000589266	TCERG1	O14776	1098 aa	Known RBP	31.95	■■■□□ 2.71
CIRBP-223	ENST00000589266	IL6ST	P40189	918 aa	Predicted RBP	31.95	■■■□□ 2.71
CIRBP-223	ENST00000589266	LRP10	Q7Z4F1	713 aa		31.95	■■■□□ 2.71
CIRBP-223	ENST00000589266	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.95	■■■□□ 2.71
CIRBP-223	ENST00000589266	ARHGAP45	Q92619	1136 aa		31.95	■■■□□ 2.71
CIRBP-223	ENST00000589266	PTPRC	P08575	1304 aa		31.95	■■■□□ 2.7
CIRBP-223	ENST00000589266	IPO8	O15397	1037 aa	Known RBP	31.94	■■■□□ 2.7
CIRBP-223	ENST00000589266	RNF123	Q5XPI4	1314 aa		31.94	■■■□□ 2.7
CIRBP-223	ENST00000589266	PROSER3	Q2NL68	480 aa		31.93	■■■□□ 2.7
CIRBP-223	ENST00000589266	ZBTB1	Q9Y2K1	713 aa		31.93	■■■□□ 2.7
CIRBP-223	ENST00000589266	FLII	Q13045	1269 aa		31.91	■■■□□ 2.7
CIRBP-223	ENST00000589266	MYL6B	P14649	208 aa		31.9	■■■□□ 2.7
CIRBP-223	ENST00000589266	EIF5	P55010	431 aa	Known RBP	31.9	■■■□□ 2.7
CIRBP-223	ENST00000589266	NFIX	Q14938	502 aa		31.9	■■■□□ 2.7
CIRBP-223	ENST00000589266	HSPA1A	P0DMV8	641 aa	Known RBP	31.89	■■■□□ 2.7
CIRBP-223	ENST00000589266	HSPA1B	P0DMV9	641 aa	Known RBP	31.89	■■■□□ 2.7
CIRBP-223	ENST00000589266	CANX	P27824	592 aa	Known RBP	31.89	■■■□□ 2.7
CIRBP-223	ENST00000589266	TTLL6	Q8N841	843 aa		31.89	■■■□□ 2.7
CIRBP-223	ENST00000589266	NARF	Q9UHQ1	456 aa		31.89	■■■□□ 2.7
CIRBP-223	ENST00000589266	NOB1	Q9ULX3	412 aa	Known RBP	31.89	■■■□□ 2.7
CIRBP-223	ENST00000589266	AFDN	P55196	1824 aa	Known RBP	31.89	■■■□□ 2.69
CIRBP-223	ENST00000589266	ANXA1	P04083	346 aa		31.88	■■■□□ 2.69
CIRBP-223	ENST00000589266	ZKSCAN2	Q63HK3	967 aa		31.88	■■■□□ 2.69
CIRBP-223	ENST00000589266	G2E3	Q7L622	706 aa		31.88	■■■□□ 2.69
CIRBP-223	ENST00000589266	NPM2	Q86SE8	214 aa	Known RBP	31.88	■■■□□ 2.69
CIRBP-223	ENST00000589266	API5	Q9BZZ5	524 aa	Known RBP	31.88	■■■□□ 2.69
CIRBP-223	ENST00000589266	DDX58	O95786	925 aa	Known RBP	31.87	■■■□□ 2.69
CIRBP-223	ENST00000589266	RRP1	P56182	461 aa	Known RBP	31.87	■■■□□ 2.69
CIRBP-223	ENST00000589266	PHAX	Q9H814	394 aa	Known RBP	31.87	■■■□□ 2.69
CIRBP-223	ENST00000589266	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.87	■■■□□ 2.69

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