RNA–Protein interactions for RNA: ENST00000587633.1

TRMT1-209, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-209ENST00000587633 KCNQ3O43525 872 aa23.76■■□□□ 1.39
TRMT1-209ENST00000587633 CNGB1Q14028 1251 aaPredicted RBP23.76■■□□□ 1.39
TRMT1-209ENST00000587633 PRPF40BQ6NWY9 871 aaKnown RBP23.76■■□□□ 1.39
TRMT1-209ENST00000587633 USP16Q9Y5T5 823 aa23.76■■□□□ 1.39
TRMT1-209ENST00000587633 DICER1Q9UPY3 1922 aaKnown RBP23.76■■□□□ 1.39
TRMT1-209ENST00000587633 HSPA1AP0DMV8 641 aaKnown RBP23.75■■□□□ 1.39
TRMT1-209ENST00000587633 HSPA1BP0DMV9 641 aaKnown RBP23.75■■□□□ 1.39
TRMT1-209ENST00000587633 PRKAR2BP31323 418 aa23.75■■□□□ 1.39
TRMT1-209ENST00000587633 CHADLQ6NUI6 762 aa23.75■■□□□ 1.39
TRMT1-209ENST00000587633 CFAP53Q96M91 514 aa23.74■■□□□ 1.39
TRMT1-209ENST00000587633 DDNO94850 711 aaPredicted RBP23.73■■□□□ 1.39
TRMT1-209ENST00000587633 NBPF5PQ86XG9 351 aaPredicted RBP23.73■■□□□ 1.39
TRMT1-209ENST00000587633 RSPH6AQ9H0K4 717 aa23.73■■□□□ 1.39
TRMT1-209ENST00000587633 CREBZFQ9NS37 354 aa23.73■■□□□ 1.39
TRMT1-209ENST00000587633 COL11A2P13942 1736 aaPredicted RBP23.73■■□□□ 1.39
TRMT1-209ENST00000587633 SNRPA1P09661 255 aaKnown RBP23.72■■□□□ 1.39
TRMT1-209ENST00000587633 C7orf43Q8WVR3 580 aa23.72■■□□□ 1.39
TRMT1-209ENST00000587633 NUDCQ9Y266 331 aa23.72■■□□□ 1.39
TRMT1-209ENST00000587633 ZNF652Q9Y2D9 606 aa23.72■■□□□ 1.39
TRMT1-209ENST00000587633 SLX4Q8IY92 1834 aa23.72■■□□□ 1.39
TRMT1-209ENST00000587633 RGL2O15211 777 aa23.71■■□□□ 1.39
TRMT1-209ENST00000587633 RTF1Q92541 710 aaKnown RBP23.71■■□□□ 1.39
TRMT1-209ENST00000587633 KLRG2A4D1S0 409 aaPredicted RBP23.7■■□□□ 1.38
TRMT1-209ENST00000587633 IQCA1LA6NCM1 817 aa23.7■■□□□ 1.38
TRMT1-209ENST00000587633 TPTE2Q6XPS3 522 aa23.7■■□□□ 1.38
TRMT1-209ENST00000587633 CAPN15O75808 1086 aa23.69■■□□□ 1.38
TRMT1-209ENST00000587633 NPR1P16066 1061 aa23.69■■□□□ 1.38
TRMT1-209ENST00000587633 PIP4K2AP48426 406 aaPredicted RBP23.69■■□□□ 1.38
TRMT1-209ENST00000587633 CCDC93Q567U6 631 aa23.69■■□□□ 1.38
TRMT1-209ENST00000587633 PRAMEF22A3QJZ6 481 aa23.68■■□□□ 1.38
TRMT1-209ENST00000587633 L3MBTL3Q96JM7 780 aaPredicted RBP23.68■■□□□ 1.38
TRMT1-209ENST00000587633 POTEIP0CG38 1075 aa23.67■■□□□ 1.38
TRMT1-209ENST00000587633 POTEJP0CG39 1038 aa23.67■■□□□ 1.38
TRMT1-209ENST00000587633 BCORQ6W2J9 1755 aa23.66■■□□□ 1.38
TRMT1-209ENST00000587633 HTATSF1O43719 755 aaKnown RBP23.66■■□□□ 1.38
TRMT1-209ENST00000587633 U2AF1L5P0DN76 240 aaPredicted RBP23.66■■□□□ 1.38
TRMT1-209ENST00000587633 U2AF1Q01081 240 aaKnown RBP eCLIP23.66■■□□□ 1.38
TRMT1-209ENST00000587633 MCM10Q7L590 875 aa23.66■■□□□ 1.38
TRMT1-209ENST00000587633 LDHDQ86WU2 507 aa23.66■■□□□ 1.38
TRMT1-209ENST00000587633 NIP7Q9Y221 180 aaKnown RBP eCLIP23.66■■□□□ 1.38
TRMT1-209ENST00000587633 FKBP4Q02790 459 aaKnown RBP eCLIP23.65■■□□□ 1.38
TRMT1-209ENST00000587633 RTKN2Q8IZC4 609 aa23.65■■□□□ 1.38
TRMT1-209ENST00000587633 TAF1DQ9H5J8 278 aaPredicted RBP23.65■■□□□ 1.38
TRMT1-209ENST00000587633 MKRN1Q9UHC7 482 aaKnown RBP23.65■■□□□ 1.38
TRMT1-209ENST00000587633 NBPF26B4DH59 902 aa23.64■■□□□ 1.37
TRMT1-209ENST00000587633 NBPF10Q6P3W6 841 aaKnown RBP23.64■■□□□ 1.37
TRMT1-209ENST00000587633 NBPF15Q8N660 670 aa23.64■■□□□ 1.37
TRMT1-209ENST00000587633 ARFGEF2Q9Y6D5 1785 aa23.64■■□□□ 1.37
TRMT1-209ENST00000587633 ALDH1B1P30837 517 aa23.63■■□□□ 1.37
TRMT1-209ENST00000587633 PASKQ96RG2 1323 aa23.62■■□□□ 1.37
TRMT1-209ENST00000587633 TAF7Q15545 349 aaPredicted RBP23.62■■□□□ 1.37
TRMT1-209ENST00000587633 CACNA1SQ13698 1873 aa23.62■■□□□ 1.37
TRMT1-209ENST00000587633 ZNF277Q9NRM2 450 aaPredicted RBP23.61■■□□□ 1.37
TRMT1-209ENST00000587633 SCN4AP35499 1836 aa23.61■■□□□ 1.37
TRMT1-209ENST00000587633 GTF2E1P29083 439 aaPredicted RBP23.6■■□□□ 1.37
TRMT1-209ENST00000587633 DCTN1Q14203 1278 aa23.6■■□□□ 1.37
TRMT1-209ENST00000587633 ITGBL1O95965 494 aaPredicted RBP23.59■■□□□ 1.37
TRMT1-209ENST00000587633 PPP2R1AP30153 589 aa23.59■■□□□ 1.37
TRMT1-209ENST00000587633 HACL1Q9UJ83 578 aa23.59■■□□□ 1.37
TRMT1-209ENST00000587633 CNTNAP1P78357 1384 aa23.59■■□□□ 1.37
TRMT1-209ENST00000587633 TMEM88BA6NKF7 163 aa23.58■■□□□ 1.37
TRMT1-209ENST00000587633 FAM177BA6PVY3 158 aa23.58■■□□□ 1.37
TRMT1-209ENST00000587633 HLFQ16534 295 aa23.58■■□□□ 1.37
TRMT1-209ENST00000587633 OLFM4Q6UX06 510 aa23.58■■□□□ 1.37
TRMT1-209ENST00000587633 ZNF541Q9H0D2 1346 aa23.58■■□□□ 1.36
TRMT1-209ENST00000587633 FZD9O00144 591 aa23.57■■□□□ 1.36
TRMT1-209ENST00000587633 EAPPQ56P03 285 aaPredicted RBP23.57■■□□□ 1.36
TRMT1-209ENST00000587633 PNMA8AQ86V59 439 aaPredicted RBP23.57■■□□□ 1.36
TRMT1-209ENST00000587633 EPHX2P34913 555 aa23.56■■□□□ 1.36
TRMT1-209ENST00000587633 IARSP41252 1262 aaKnown RBP23.56■■□□□ 1.36
TRMT1-209ENST00000587633 SYNE4Q8N205 404 aa23.56■■□□□ 1.36
TRMT1-209ENST00000587633 NYXQ9GZU5 481 aa23.56■■□□□ 1.36
TRMT1-209ENST00000587633 ERVV-1B6SEH8 477 aa23.55■■□□□ 1.36
TRMT1-209ENST00000587633 CRY2Q49AN0 593 aa23.55■■□□□ 1.36
TRMT1-209ENST00000587633 PSMD1Q99460 953 aa23.55■■□□□ 1.36
TRMT1-209ENST00000587633 MIS18AQ9NYP9 233 aa23.55■■□□□ 1.36
TRMT1-209ENST00000587633 CLEC11AQ9Y240 323 aa23.55■■□□□ 1.36
TRMT1-209ENST00000587633 CC2D2BQ6DHV5 1058 aa23.54■■□□□ 1.36
TRMT1-209ENST00000587633 GPC2Q8N158 579 aa23.54■■□□□ 1.36
TRMT1-209ENST00000587633 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
TRMT1-209ENST00000587633 JDP2Q8WYK2 163 aa23.54■■□□□ 1.36
TRMT1-209ENST00000587633 FOXN1O15353 648 aa23.53■■□□□ 1.36
TRMT1-209ENST00000587633 VEGFBP49765 207 aa23.53■■□□□ 1.36
TRMT1-209ENST00000587633 PRDM10Q9NQV6 1147 aa23.53■■□□□ 1.36
TRMT1-209ENST00000587633 NEFMP07197 916 aa23.52■■□□□ 1.36
TRMT1-209ENST00000587633 CNTROBQ8N137 903 aa23.52■■□□□ 1.36
TRMT1-209ENST00000587633 GRIPAP1Q4V328 841 aa23.51■■□□□ 1.35
TRMT1-209ENST00000587633 AIDAQ96BJ3 306 aa23.51■■□□□ 1.35
TRMT1-209ENST00000587633 RNF123Q5XPI4 1314 aa23.51■■□□□ 1.35
TRMT1-209ENST00000587633 HOXA10P31260 410 aaPredicted RBP23.5■■□□□ 1.35
TRMT1-209ENST00000587633 CTCFP49711 727 aaPredicted RBP23.5■■□□□ 1.35
TRMT1-209ENST00000587633 NUTM1Q86Y26 1132 aa23.5■■□□□ 1.35
TRMT1-209ENST00000587633 NGEFQ8N5V2 710 aa23.5■■□□□ 1.35
TRMT1-209ENST00000587633 MAP3K15Q6ZN16 1313 aa23.5■■□□□ 1.35
TRMT1-209ENST00000587633 SNED1Q8TER0 1413 aa23.49■■□□□ 1.35
TRMT1-209ENST00000587633 EIF6P56537 245 aaKnown RBP23.48■■□□□ 1.35
TRMT1-209ENST00000587633 DEFB115Q30KQ5 88 aa23.48■■□□□ 1.35
TRMT1-209ENST00000587633 MAP1SQ66K74 1059 aaPredicted RBP23.48■■□□□ 1.35
TRMT1-209ENST00000587633 KIF6Q6ZMV9 814 aa23.48■■□□□ 1.35
TRMT1-209ENST00000587633 RPGRQ92834 1020 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms