RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 ARFGEF2Q9Y6D5 1785 aa17.71■□□□□ 0.43
SMARCA4-211ENST00000586921 ST20-MTHFSA0A0A6YYL1 179 aa17.71■□□□□ 0.43
SMARCA4-211ENST00000586921 MTHFSP49914 203 aa17.71■□□□□ 0.43
SMARCA4-211ENST00000586921 CCDC93Q567U6 631 aa17.71■□□□□ 0.43
SMARCA4-211ENST00000586921 HABP4Q5JVS0 413 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-211ENST00000586921 ZNF530Q6P9A1 599 aaPredicted RBP17.71■□□□□ 0.43
SMARCA4-211ENST00000586921 GPC2Q8N158 579 aa17.71■□□□□ 0.43
SMARCA4-211ENST00000586921 CYP19A1P11511 503 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-211ENST00000586921 PRR5LQ6MZQ0 368 aa17.7■□□□□ 0.42
SMARCA4-211ENST00000586921 SAPCD2Q86UD0 394 aa17.7■□□□□ 0.42
SMARCA4-211ENST00000586921 LMOD1P29536 600 aaPredicted RBP17.69■□□□□ 0.42
SMARCA4-211ENST00000586921 FKBP4Q02790 459 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMARCA4-211ENST00000586921 PLEKHO1Q53GL0 409 aaPredicted RBP17.69■□□□□ 0.42
SMARCA4-211ENST00000586921 ZBTB1Q9Y2K1 713 aa17.69■□□□□ 0.42
SMARCA4-211ENST00000586921 NPHP1O15259 732 aa17.68■□□□□ 0.42
SMARCA4-211ENST00000586921 SRGNP10124 158 aa17.68■□□□□ 0.42
SMARCA4-211ENST00000586921 TBC1D9BQ66K14 1250 aa17.68■□□□□ 0.42
SMARCA4-211ENST00000586921 FZD9O00144 591 aa17.67■□□□□ 0.42
SMARCA4-211ENST00000586921 MASTLQ96GX5 879 aa17.67■□□□□ 0.42
SMARCA4-211ENST00000586921 HHIPL1Q96JK4 782 aa17.67■□□□□ 0.42
SMARCA4-211ENST00000586921 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
SMARCA4-211ENST00000586921 C7orf43Q8WVR3 580 aa17.66■□□□□ 0.42
SMARCA4-211ENST00000586921 TESK2Q96S53 571 aa17.66■□□□□ 0.42
SMARCA4-211ENST00000586921 CELF2O95319 508 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-211ENST00000586921 AMOTQ4VCS5 1084 aa17.65■□□□□ 0.42
SMARCA4-211ENST00000586921 CNBD1Q8NA66 436 aa17.65■□□□□ 0.42
SMARCA4-211ENST00000586921 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-211ENST00000586921 NOGQ13253 232 aa17.64■□□□□ 0.41
SMARCA4-211ENST00000586921 EIF4A2Q14240 407 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-211ENST00000586921 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
SMARCA4-211ENST00000586921 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-211ENST00000586921 ST5P78524 1137 aa17.63■□□□□ 0.41
SMARCA4-211ENST00000586921 RTKN2Q8IZC4 609 aa17.63■□□□□ 0.41
SMARCA4-211ENST00000586921 SIN3AQ96ST3 1273 aa17.63■□□□□ 0.41
SMARCA4-211ENST00000586921 A0A087WZG4 1122 aa17.62■□□□□ 0.41
SMARCA4-211ENST00000586921 EPS15P42566 896 aa17.62■□□□□ 0.41
SMARCA4-211ENST00000586921 NEUROD1Q13562 356 aa17.62■□□□□ 0.41
SMARCA4-211ENST00000586921 USP50Q70EL3 339 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-211ENST00000586921 JDP2Q8WYK2 163 aa17.62■□□□□ 0.41
SMARCA4-211ENST00000586921 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
SMARCA4-211ENST00000586921 BCORQ6W2J9 1755 aa17.61■□□□□ 0.41
SMARCA4-211ENST00000586921 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
SMARCA4-211ENST00000586921 EIF6P56537 245 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-211ENST00000586921 ZIC5Q96T25 663 aa17.61■□□□□ 0.41
SMARCA4-211ENST00000586921 SAGE1Q9NXZ1 904 aa17.61■□□□□ 0.41
SMARCA4-211ENST00000586921 SCNN1DP51172 638 aa17.6■□□□□ 0.41
SMARCA4-211ENST00000586921 OLFM4Q6UX06 510 aa17.6■□□□□ 0.41
SMARCA4-211ENST00000586921 CTU1Q7Z7A3 348 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-211ENST00000586921 FXR1P51114 621 aaKnown RBP eCLIP17.59■□□□□ 0.41
SMARCA4-211ENST00000586921 SYNE4Q8N205 404 aa17.59■□□□□ 0.41
SMARCA4-211ENST00000586921 SETDB2Q96T68 719 aa17.59■□□□□ 0.41
SMARCA4-211ENST00000586921 ZNF408Q9H9D4 720 aa17.59■□□□□ 0.41
SMARCA4-211ENST00000586921 POLKQ9UBT6 870 aa17.59■□□□□ 0.41
SMARCA4-211ENST00000586921 HPS5Q9UPZ3 1129 aa17.59■□□□□ 0.41
SMARCA4-211ENST00000586921 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.41
SMARCA4-211ENST00000586921 NPR1P16066 1061 aa17.58■□□□□ 0.4
SMARCA4-211ENST00000586921 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-211ENST00000586921 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
SMARCA4-211ENST00000586921 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
SMARCA4-211ENST00000586921 DLL1O00548 723 aa17.56■□□□□ 0.4
SMARCA4-211ENST00000586921 GLIS2Q9BZE0 524 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-211ENST00000586921 SLC52A2Q9HAB3 445 aa17.56■□□□□ 0.4
SMARCA4-211ENST00000586921 TBC1D2BQ9UPU7 963 aa17.55■□□□□ 0.4
SMARCA4-211ENST00000586921 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-211ENST00000586921 TRPA1O75762 1119 aa17.54■□□□□ 0.4
SMARCA4-211ENST00000586921 STARD3NLO95772 234 aa17.54■□□□□ 0.4
SMARCA4-211ENST00000586921 VSIG10Q8N0Z9 540 aa17.54■□□□□ 0.4
SMARCA4-211ENST00000586921 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
SMARCA4-211ENST00000586921 COL4A5P29400 1685 aa17.54■□□□□ 0.4
SMARCA4-211ENST00000586921 MKI67P46013 3256 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-211ENST00000586921 HUNKP57058 714 aa17.53■□□□□ 0.4
SMARCA4-211ENST00000586921 PSMD1Q99460 953 aa17.53■□□□□ 0.4
SMARCA4-211ENST00000586921 ADARB2Q9NS39 739 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-211ENST00000586921 RNF186Q9NXI6 227 aa17.53■□□□□ 0.4
SMARCA4-211ENST00000586921 CUL9Q8IWT3 2517 aa17.52■□□□□ 0.39
SMARCA4-211ENST00000586921 MRC1P22897 1456 aa17.51■□□□□ 0.39
SMARCA4-211ENST00000586921 AKAP11Q9UKA4 1901 aa17.51■□□□□ 0.39
SMARCA4-211ENST00000586921 PKN2Q16513 984 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-211ENST00000586921 NBPF5PQ86XG9 351 aaPredicted RBP17.51■□□□□ 0.39
SMARCA4-211ENST00000586921 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
SMARCA4-211ENST00000586921 GPRC5DQ9NZD1 345 aa17.5■□□□□ 0.39
SMARCA4-211ENST00000586921 FAM155AB1AL88 458 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-211ENST00000586921 TNNT2P45379 298 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-211ENST00000586921 KIF23Q02241 960 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-211ENST00000586921 NPM2Q86SE8 214 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-211ENST00000586921 LARGE2Q8N3Y3 721 aa17.49■□□□□ 0.39
SMARCA4-211ENST00000586921 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
SMARCA4-211ENST00000586921 KLRG2A4D1S0 409 aaPredicted RBP17.48■□□□□ 0.39
SMARCA4-211ENST00000586921 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
SMARCA4-211ENST00000586921 RGMBQ6NW40 437 aa17.48■□□□□ 0.39
SMARCA4-211ENST00000586921 LGR6Q9HBX8 967 aa17.48■□□□□ 0.39
SMARCA4-211ENST00000586921 ALDH1B1P30837 517 aa17.47■□□□□ 0.39
SMARCA4-211ENST00000586921 CDC37L1Q7L3B6 337 aa17.47■□□□□ 0.39
SMARCA4-211ENST00000586921 CCDC102AQ96A19 550 aa17.47■□□□□ 0.39
SMARCA4-211ENST00000586921 UBR2Q8IWV8 1755 aa17.47■□□□□ 0.39
SMARCA4-211ENST00000586921 A0A0C4DFX4 3053 aa17.47■□□□□ 0.39
SMARCA4-211ENST00000586921 IL6STP40189 918 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-211ENST00000586921 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
SMARCA4-211ENST00000586921 PGAP2Q9UHJ9 254 aa17.46■□□□□ 0.39
SMARCA4-211ENST00000586921 HDAC9Q9UKV0 1011 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms