RNA–Protein interactions for RNA: ENST00000586817.5

POLR2E-205, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 2,441 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-205ENST00000586817 ARHGAP23Q9P227 1491 aa27.33■■□□□ 1.97
POLR2E-205ENST00000586817 TEFQ10587 303 aa27.32■■□□□ 1.96
POLR2E-205ENST00000586817 ZSCAN22P10073 491 aaPredicted RBP27.32■■□□□ 1.96
POLR2E-205ENST00000586817 CWF19L2Q2TBE0 894 aaKnown RBP27.32■■□□□ 1.96
POLR2E-205ENST00000586817 IP6K1Q92551 441 aa27.32■■□□□ 1.96
POLR2E-205ENST00000586817 CCDC39Q9UFE4 941 aa27.32■■□□□ 1.96
POLR2E-205ENST00000586817 LIMCH1Q9UPQ0 1083 aa27.32■■□□□ 1.96
POLR2E-205ENST00000586817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.32■■□□□ 1.96
POLR2E-205ENST00000586817 FIBPO43427 364 aa27.31■■□□□ 1.96
POLR2E-205ENST00000586817 PRPF40BQ6NWY9 871 aaKnown RBP27.31■■□□□ 1.96
POLR2E-205ENST00000586817 ZNF530Q6P9A1 599 aaPredicted RBP27.31■■□□□ 1.96
POLR2E-205ENST00000586817 CCDC83Q8IWF9 413 aa27.31■■□□□ 1.96
POLR2E-205ENST00000586817 DIAPH3Q9NSV4 1193 aa27.31■■□□□ 1.96
POLR2E-205ENST00000586817 STX6O43752 255 aa27.31■■□□□ 1.96
POLR2E-205ENST00000586817 PTMAP06454 111 aaKnown RBP27.31■■□□□ 1.96
POLR2E-205ENST00000586817 MAP3K2Q9Y2U5 619 aa27.31■■□□□ 1.96
POLR2E-205ENST00000586817 PHF8Q9UPP1 1060 aa27.3■■□□□ 1.96
POLR2E-205ENST00000586817 COL9A3Q14050 684 aaPredicted RBP27.3■■□□□ 1.96
POLR2E-205ENST00000586817 SMC3Q9UQE7 1217 aa27.3■■□□□ 1.96
POLR2E-205ENST00000586817 ANKARQ7Z5J8 1434 aa27.29■■□□□ 1.96
POLR2E-205ENST00000586817 JAKMIP1Q96N16 626 aaKnown RBP27.29■■□□□ 1.96
POLR2E-205ENST00000586817 ZNF830Q96NB3 372 aaPredicted RBP27.29■■□□□ 1.96
POLR2E-205ENST00000586817 C9orf78Q9NZ63 289 aaPredicted RBP27.29■■□□□ 1.96
POLR2E-205ENST00000586817 NPHP4O75161 1426 aaPredicted RBP27.28■■□□□ 1.96
POLR2E-205ENST00000586817 HYPKQ9NX55 129 aa27.28■■□□□ 1.96
POLR2E-205ENST00000586817 LTN1O94822 1766 aa27.28■■□□□ 1.96
POLR2E-205ENST00000586817 EPB41L2O43491 1005 aaKnown RBP27.28■■□□□ 1.96
POLR2E-205ENST00000586817 GLRX3O76003 335 aaKnown RBP27.28■■□□□ 1.96
POLR2E-205ENST00000586817 CLASRPQ8N2M8 674 aaKnown RBP27.28■■□□□ 1.96
POLR2E-205ENST00000586817 USP25Q9UHP3 1055 aa27.28■■□□□ 1.96
POLR2E-205ENST00000586817 F13A1P00488 732 aa27.27■■□□□ 1.96
POLR2E-205ENST00000586817 HCLS1P14317 486 aaPredicted RBP27.26■■□□□ 1.95
POLR2E-205ENST00000586817 GJB2P29033 226 aa27.26■■□□□ 1.95
POLR2E-205ENST00000586817 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.26■■□□□ 1.955e-12■□□□□ 11.3
POLR2E-205ENST00000586817 HSP90AB4PQ58FF6 505 aa27.25■■□□□ 1.95
POLR2E-205ENST00000586817 NECAB1Q8N987 351 aa27.25■■□□□ 1.95
POLR2E-205ENST00000586817 PDRG1Q9NUG6 133 aa27.25■■□□□ 1.95
POLR2E-205ENST00000586817 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.25■■□□□ 1.95
POLR2E-205ENST00000586817 PHF14O94880 888 aa27.25■■□□□ 1.95
POLR2E-205ENST00000586817 AACSQ86V21 672 aa27.25■■□□□ 1.95
POLR2E-205ENST00000586817 ECHDC1Q9NTX5 307 aa27.25■■□□□ 1.95
POLR2E-205ENST00000586817 TTC41PQ6P2S7 1318 aa27.24■■□□□ 1.95
POLR2E-205ENST00000586817 RGPD2P0DJD1 1756 aa27.24■■□□□ 1.95
POLR2E-205ENST00000586817 IFIT2P09913 472 aaKnown RBP27.24■■□□□ 1.95
POLR2E-205ENST00000586817 DNM1Q05193 864 aaKnown RBP27.24■■□□□ 1.95
POLR2E-205ENST00000586817 CCDC183Q5T5S1 534 aa27.24■■□□□ 1.95
POLR2E-205ENST00000586817 TMEM87AQ8NBN3 555 aa27.24■■□□□ 1.95
POLR2E-205ENST00000586817 ST3GAL1Q11201 340 aa27.24■■□□□ 1.95
POLR2E-205ENST00000586817 AIMP1Q12904 312 aaKnown RBP27.24■■□□□ 1.95
POLR2E-205ENST00000586817 FAM227BQ96M60 508 aa27.24■■□□□ 1.95
POLR2E-205ENST00000586817 PDCL3Q9H2J4 239 aa27.24■■□□□ 1.95
POLR2E-205ENST00000586817 DBF4Q9UBU7 674 aaPredicted RBP27.24■■□□□ 1.95
POLR2E-205ENST00000586817 ESCO1Q5FWF5 840 aa27.23■■□□□ 1.95
POLR2E-205ENST00000586817 USP42Q9H9J4 1324 aaKnown RBP27.23■■□□□ 1.95
POLR2E-205ENST00000586817 MED1Q15648 1581 aaPredicted RBP27.23■■□□□ 1.95
POLR2E-205ENST00000586817 UQCRHLA0A096LP55 91 aa27.22■■□□□ 1.95
POLR2E-205ENST00000586817 UQCRHP07919 91 aa27.22■■□□□ 1.95
POLR2E-205ENST00000586817 HOXB7P09629 217 aa27.22■■□□□ 1.95
POLR2E-205ENST00000586817 AKAP4Q5JQC9 854 aa27.22■■□□□ 1.95
POLR2E-205ENST00000586817 CCDC8Q9H0W5 538 aaPredicted RBP27.22■■□□□ 1.95
POLR2E-205ENST00000586817 PODXL2Q9NZ53 605 aa27.22■■□□□ 1.95
POLR2E-205ENST00000586817 PSME1Q06323 249 aa27.22■■□□□ 1.95
POLR2E-205ENST00000586817 GIMAP6Q6P9H5 292 aa27.22■■□□□ 1.95
POLR2E-205ENST00000586817 PXDNQ92626 1479 aa27.22■■□□□ 1.95
POLR2E-205ENST00000586817 TCEANC2Q96MN5 208 aa27.21■■□□□ 1.95
POLR2E-205ENST00000586817 FAM13BQ9NYF5 915 aa27.21■■□□□ 1.95
POLR2E-205ENST00000586817 TLR7Q9NYK1 1049 aaKnown RBP27.21■■□□□ 1.95
POLR2E-205ENST00000586817 RNMTO43148 476 aaKnown RBP27.21■■□□□ 1.95
POLR2E-205ENST00000586817 KDM3BQ7LBC6 1761 aa27.21■■□□□ 1.95
POLR2E-205ENST00000586817 VPS37CA5D8V6 355 aaPredicted RBP27.2■■□□□ 1.95
POLR2E-205ENST00000586817 UBE2HP62256 183 aa27.2■■□□□ 1.95
POLR2E-205ENST00000586817 ME3Q16798 604 aa27.2■■□□□ 1.95
POLR2E-205ENST00000586817 SUCLG2Q96I99 432 aa27.2■■□□□ 1.95
POLR2E-205ENST00000586817 SIL1Q9H173 461 aa27.2■■□□□ 1.95
POLR2E-205ENST00000586817 GIGYF1O75420 1035 aaPredicted RBP27.2■■□□□ 1.94
POLR2E-205ENST00000586817 KLHDC4Q8TBB5 520 aa27.2■■□□□ 1.94
POLR2E-205ENST00000586817 MTMR6Q9Y217 621 aa27.2■■□□□ 1.94
POLR2E-205ENST00000586817 MCM5P33992 734 aa27.19■■□□□ 1.94
POLR2E-205ENST00000586817 MTX1Q13505 466 aa27.19■■□□□ 1.94
POLR2E-205ENST00000586817 RUFY2Q8WXA3 655 aa27.19■■□□□ 1.94
POLR2E-205ENST00000586817 PLCB2Q00722 1185 aa27.19■■□□□ 1.94
POLR2E-205ENST00000586817 PLEKHO1Q53GL0 409 aaPredicted RBP27.19■■□□□ 1.94
POLR2E-205ENST00000586817 KSR2Q6VAB6 950 aa27.19■■□□□ 1.94
POLR2E-205ENST00000586817 C17orf53Q8N3J3 647 aaPredicted RBP27.19■■□□□ 1.94
POLR2E-205ENST00000586817 KAZALD1Q96I82 304 aa27.19■■□□□ 1.94
POLR2E-205ENST00000586817 CYP46A1Q9Y6A2 500 aa27.19■■□□□ 1.94
POLR2E-205ENST00000586817 SASH1O94885 1247 aa27.18■■□□□ 1.94
POLR2E-205ENST00000586817 ADCY5O95622 1261 aa27.18■■□□□ 1.94
POLR2E-205ENST00000586817 LMOD2Q6P5Q4 547 aa27.18■■□□□ 1.94
POLR2E-205ENST00000586817 EAF2Q96CJ1 260 aaPredicted RBP27.18■■□□□ 1.94
POLR2E-205ENST00000586817 RBM8AQ9Y5S9 174 aaKnown RBP27.18■■□□□ 1.94
POLR2E-205ENST00000586817 NFAT5O94916 1531 aa27.18■■□□□ 1.94
POLR2E-205ENST00000586817 KCNJ4P48050 445 aa27.18■■□□□ 1.94
POLR2E-205ENST00000586817 NMIQ13287 307 aaPredicted RBP27.18■■□□□ 1.94
POLR2E-205ENST00000586817 BICC1Q9H694 974 aaKnown RBP27.18■■□□□ 1.94
POLR2E-205ENST00000586817 ZSWIM6Q9HCJ5 1215 aa27.18■■□□□ 1.94
POLR2E-205ENST00000586817 TAF6LQ9Y6J9 622 aa27.18■■□□□ 1.94
POLR2E-205ENST00000586817 NECTIN1Q15223 517 aa27.17■■□□□ 1.94
POLR2E-205ENST00000586817 C1orf141Q5JVX7 400 aa27.17■■□□□ 1.94
POLR2E-205ENST00000586817 VPS53Q5VIR6 699 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms