RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 TMX3Q96JJ7 454 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 TRERF1Q96PN7 1200 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 MPHOSPH8Q99549 860 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 THUMPD2Q9BTF0 503 aaKnown RBP10.99□□□□□ -0.65
SKA2-207ENST00000583380 TOMM22Q9NS69 142 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 AATKQ6ZMQ8 1374 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 IQSEC2Q5JU85 1478 aa10.99□□□□□ -0.65
SKA2-207ENST00000583380 SKILP12757 684 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 PRPHP41219 470 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 MRPL12P52815 198 aaKnown RBP10.98□□□□□ -0.65
SKA2-207ENST00000583380 PLCB2Q00722 1185 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 ADCY2Q08462 1091 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 ANKRD45Q5TZF3 282 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 BRAPQ7Z569 592 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 TAX1BP1Q86VP1 789 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 C17orf53Q8N3J3 647 aaPredicted RBP10.98□□□□□ -0.65
SKA2-207ENST00000583380 MAGEC3Q8TD91 643 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 ZNF592Q92610 1267 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 GTF3C6Q969F1 213 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 LNPKQ9C0E8 428 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 NAT10Q9H0A0 1025 aaKnown RBP10.98□□□□□ -0.65
SKA2-207ENST00000583380 SUDS3Q9H7L9 328 aaPredicted RBP10.98□□□□□ -0.65
SKA2-207ENST00000583380 HOMER3Q9NSC5 361 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 SPATS2LQ9NUQ6 558 aaKnown RBP10.98□□□□□ -0.65
SKA2-207ENST00000583380 PIK3R4Q99570 1358 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 DISP3Q9P2K9 1392 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 RGS12O14924 1447 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 FAM135BQ49AJ0 1406 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 LAMC3Q9Y6N6 1575 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 CROCC2H7BZ55 1655 aa10.98□□□□□ -0.65
SKA2-207ENST00000583380 ZSCAN12O43309 604 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 MYO1BO43795 1136 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 ZSCAN22P10073 491 aaPredicted RBP10.97□□□□□ -0.65
SKA2-207ENST00000583380 PDCP20941 246 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 TTC22Q5TAA0 569 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 RBM43Q6ZSC3 357 aaKnown RBP10.97□□□□□ -0.65
SKA2-207ENST00000583380 MICALCLQ6ZW33 695 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 B4GALNT4Q76KP1 1039 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 APLFQ8IW19 511 aaPredicted RBP10.97□□□□□ -0.65
SKA2-207ENST00000583380 CEP112Q8N8E3 955 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 MKL1Q969V6 931 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 MIEF2Q96C03 454 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 SGSM3Q96HU1 749 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 TRIM6Q9C030 488 aaPredicted RBP10.97□□□□□ -0.65
SKA2-207ENST00000583380 SCAND2PQ9GZW5 306 aaPredicted RBP10.97□□□□□ -0.65
SKA2-207ENST00000583380 OSBPL5Q9H0X9 879 aaPredicted RBP10.97□□□□□ -0.65
SKA2-207ENST00000583380 NUP62CLQ9H1M0 184 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 NUP155O75694 1391 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 RPAP1Q9BWH6 1393 aaPredicted RBP10.97□□□□□ -0.65
SKA2-207ENST00000583380 SYNJ2O15056 1496 aa10.97□□□□□ -0.65
SKA2-207ENST00000583380 RNF17Q9BXT8 1623 aaKnown RBP10.96□□□□□ -0.65
SKA2-207ENST00000583380 DNMBPQ6XZF7 1577 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 NOS1P29475 1434 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 POLR3GO15318 223 aaPredicted RBP10.96□□□□□ -0.65
SKA2-207ENST00000583380 TRIM27P14373 513 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 ELF1P32519 619 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 SLC8A3P57103 927 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 ETF1P62495 437 aaKnown RBP10.96□□□□□ -0.65
SKA2-207ENST00000583380 PLCB4Q15147 1175 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 CC2D1AQ6P1N0 951 aaPredicted RBP10.96□□□□□ -0.65
SKA2-207ENST00000583380 SPC24Q8NBT2 197 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 ARMC2Q8NEN0 867 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 CABS1Q96KC9 395 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 VIPAS39Q9H9C1 493 aa10.96□□□□□ -0.65
SKA2-207ENST00000583380 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
SKA2-207ENST00000583380 MAGI2Q86UL8 1455 aa10.95□□□□□ -0.66
SKA2-207ENST00000583380 EBAG9O00559 213 aa10.95□□□□□ -0.66
SKA2-207ENST00000583380 ARHGAP25P42331 645 aa10.95□□□□□ -0.66
SKA2-207ENST00000583380 LMNB2Q03252 620 aa10.95□□□□□ -0.66
SKA2-207ENST00000583380 WWC2Q6AWC2 1192 aa10.95□□□□□ -0.66
SKA2-207ENST00000583380 ZSCAN31Q96LW9 406 aaPredicted RBP10.95□□□□□ -0.66
SKA2-207ENST00000583380 PUS7Q96PZ0 661 aaKnown RBP10.95□□□□□ -0.66
SKA2-207ENST00000583380 CPSF2Q9P2I0 782 aaKnown RBP10.95□□□□□ -0.66
SKA2-207ENST00000583380 MYO6Q9UM54 1294 aa10.95□□□□□ -0.66
SKA2-207ENST00000583380 MAGI3Q5TCQ9 1506 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 NSD2O96028 1365 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 MAP2K7O14733 419 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 PRR29P0C7W0 189 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 PSME1Q06323 249 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 TYRO3Q06418 890 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 DRP2Q13474 957 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 KIF4BQ2VIQ3 1234 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 MAP9Q49MG5 647 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 REXO1L1PQ8IX06 675 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 CHMP4CQ96CF2 233 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.94□□□□□ -0.667e-8■■■■■ 186.3
SKA2-207ENST00000583380 ETAA1Q9NY74 926 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 ANAPC4Q9UJX5 808 aa10.94□□□□□ -0.66
SKA2-207ENST00000583380 ZNF777Q9ULD5 760 aaPredicted RBP10.94□□□□□ -0.66
SKA2-207ENST00000583380 NSFL1CQ9UNZ2 370 aaKnown RBP10.94□□□□□ -0.66
SKA2-207ENST00000583380 ASXL2Q76L83 1435 aa10.93□□□□□ -0.66
SKA2-207ENST00000583380 NPHP3Q7Z494 1330 aa10.93□□□□□ -0.66
SKA2-207ENST00000583380 GOLGA6L4A6NEF3 574 aa10.93□□□□□ -0.66
SKA2-207ENST00000583380 TADA3O75528 432 aa10.93□□□□□ -0.66
SKA2-207ENST00000583380 SASH1O94885 1247 aa10.93□□□□□ -0.66
SKA2-207ENST00000583380 USP5P45974 858 aa10.93□□□□□ -0.66
SKA2-207ENST00000583380 NEK4P51957 841 aa10.93□□□□□ -0.66
SKA2-207ENST00000583380 GYS2P54840 703 aa10.93□□□□□ -0.66
SKA2-207ENST00000583380 KRT85P78386 507 aa10.93□□□□□ -0.66
SKA2-207ENST00000583380 OS9Q13438 667 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms