RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 BCL2L12Q9HB09 334 aa31.5■■■□□ 2.63
MIR3960-201ENST00000583311 PARP3Q9Y6F1 533 aa31.5■■■□□ 2.63
MIR3960-201ENST00000583311 MAP3K15Q6ZN16 1313 aa31.49■■■□□ 2.63
MIR3960-201ENST00000583311 VAMP4O75379 141 aa31.47■■■□□ 2.63
MIR3960-201ENST00000583311 TM4SF1P30408 202 aa31.47■■■□□ 2.63
MIR3960-201ENST00000583311 COPS6Q7L5N1 327 aa31.47■■■□□ 2.63
MIR3960-201ENST00000583311 CDCA7LQ96GN5 454 aa31.47■■■□□ 2.63
MIR3960-201ENST00000583311 TTLL7Q6ZT98 887 aa31.46■■■□□ 2.63
MIR3960-201ENST00000583311 XAGE3Q8WTP9 111 aa31.46■■■□□ 2.63
MIR3960-201ENST00000583311 ZBED9Q6R2W3 1325 aa31.46■■■□□ 2.63
MIR3960-201ENST00000583311 AIMP1Q12904 312 aaKnown RBP31.45■■■□□ 2.63
MIR3960-201ENST00000583311 NFIXQ14938 502 aa31.45■■■□□ 2.63
MIR3960-201ENST00000583311 TRMT2AQ8IZ69 625 aaKnown RBP31.45■■■□□ 2.63
MIR3960-201ENST00000583311 SRCAPQ6ZRS2 3230 aa31.44■■■□□ 2.62
MIR3960-201ENST00000583311 TBC1D9BQ66K14 1250 aa31.43■■■□□ 2.62
MIR3960-201ENST00000583311 SETDB2Q96T68 719 aa31.43■■■□□ 2.62
MIR3960-201ENST00000583311 ZBTB3Q9H5J0 574 aa31.43■■■□□ 2.62
MIR3960-201ENST00000583311 POLRMTO00411 1230 aaKnown RBP31.41■■■□□ 2.62
MIR3960-201ENST00000583311 BICDL1Q6ZP65 573 aa31.41■■■□□ 2.62
MIR3960-201ENST00000583311 CARMIL3Q8ND23 1372 aa31.41■■■□□ 2.62
MIR3960-201ENST00000583311 DDR1Q08345 913 aa31.4■■■□□ 2.62
MIR3960-201ENST00000583311 HLFQ16534 295 aa31.4■■■□□ 2.62
MIR3960-201ENST00000583311 GIGYF2Q6Y7W6 1299 aaKnown RBP31.4■■■□□ 2.62
MIR3960-201ENST00000583311 KLHL34Q8N239 644 aa31.4■■■□□ 2.62
MIR3960-201ENST00000583311 FHDC1Q9C0D6 1143 aaPredicted RBP31.4■■■□□ 2.62
MIR3960-201ENST00000583311 DDX58O95786 925 aaKnown RBP31.38■■■□□ 2.61
MIR3960-201ENST00000583311 SLC4A2P04920 1241 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 CT47B1P0C2W7 299 aaPredicted RBP31.38■■■□□ 2.61
MIR3960-201ENST00000583311 HSP90AB3PQ58FF7 597 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 ANKRD13DQ6ZTN6 518 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 PLBD2Q8NHP8 589 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 ZNF428Q96B54 188 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 NIP7Q9Y221 180 aaKnown RBP eCLIP31.38■■■□□ 2.61
MIR3960-201ENST00000583311 CD2APQ9Y5K6 639 aa31.38■■■□□ 2.61
MIR3960-201ENST00000583311 SERPINB2P05120 415 aa31.37■■■□□ 2.61
MIR3960-201ENST00000583311 PHAXQ9H814 394 aaKnown RBP31.37■■■□□ 2.61
MIR3960-201ENST00000583311 ATP10DQ9P241 1426 aa31.37■■■□□ 2.61
MIR3960-201ENST00000583311 TCERG1O14776 1098 aaKnown RBP31.36■■■□□ 2.61
MIR3960-201ENST00000583311 NUP98P52948 1817 aa31.35■■■□□ 2.61
MIR3960-201ENST00000583311 RIC3Q7Z5B4 369 aa31.34■■■□□ 2.61
MIR3960-201ENST00000583311 SYT17Q9BSW7 474 aa31.34■■■□□ 2.61
MIR3960-201ENST00000583311 CACNA1FO60840 1977 aa31.34■■■□□ 2.61
MIR3960-201ENST00000583311 NPHP1O15259 732 aa31.33■■■□□ 2.61
MIR3960-201ENST00000583311 NRXN2Q9P2S2 1712 aa31.32■■■□□ 2.6
MIR3960-201ENST00000583311 C10orf71Q711Q0 1435 aa31.32■■■□□ 2.6
MIR3960-201ENST00000583311 NBPF5PQ86XG9 351 aaPredicted RBP31.31■■■□□ 2.6
MIR3960-201ENST00000583311 TCIRG1Q13488 830 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 PARP10Q53GL7 1025 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 ZNF34Q8IZ26 560 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 CNBD1Q8NA66 436 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 NYXQ9GZU5 481 aa31.3■■■□□ 2.6
MIR3960-201ENST00000583311 AFDNP55196 1824 aaKnown RBP31.29■■■□□ 2.6
MIR3960-201ENST00000583311 GPTP24298 496 aa31.29■■■□□ 2.6
MIR3960-201ENST00000583311 FLIIQ13045 1269 aa31.29■■■□□ 2.6
MIR3960-201ENST00000583311 TPTE2Q6XPS3 522 aa31.29■■■□□ 2.6
MIR3960-201ENST00000583311 ST5P78524 1137 aa31.28■■■□□ 2.6
MIR3960-201ENST00000583311 KIF13BQ9NQT8 1826 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 TGFB2P61812 414 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 ALDH1L2Q3SY69 923 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 KSR2Q6VAB6 950 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 PPP1R42Q7Z4L9 355 aa31.27■■■□□ 2.6
MIR3960-201ENST00000583311 ANKRD36CQ5JPF3 1778 aa31.26■■■□□ 2.59
MIR3960-201ENST00000583311 ARFGEF2Q9Y6D5 1785 aa31.26■■■□□ 2.59
MIR3960-201ENST00000583311 FKBP5Q13451 457 aaPredicted RBP31.26■■■□□ 2.59
MIR3960-201ENST00000583311 PRR5LQ6MZQ0 368 aa31.26■■■□□ 2.59
MIR3960-201ENST00000583311 G2E3Q7L622 706 aa31.26■■■□□ 2.59
MIR3960-201ENST00000583311 IBTKQ9P2D0 1353 aaPredicted RBP31.26■■■□□ 2.59
MIR3960-201ENST00000583311 GTF2E1P29083 439 aaPredicted RBP31.25■■■□□ 2.59
MIR3960-201ENST00000583311 UBN2Q6ZU65 1347 aa31.24■■■□□ 2.59
MIR3960-201ENST00000583311 PI4KAP2A4QPH2 592 aa31.24■■■□□ 2.59
MIR3960-201ENST00000583311 PI4KAP1Q8N8J0 262 aa31.24■■■□□ 2.59
MIR3960-201ENST00000583311 FAM177BA6PVY3 158 aa31.23■■■□□ 2.59
MIR3960-201ENST00000583311 MAP3K2Q9Y2U5 619 aa31.23■■■□□ 2.59
MIR3960-201ENST00000583311 NEXNQ0ZGT2 675 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 NLGN2Q8NFZ4 835 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 SSH1Q8WYL5 1049 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 METTL22Q9BUU2 404 aaPredicted RBP31.22■■■□□ 2.59
MIR3960-201ENST00000583311 BRIP1Q9BX63 1249 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 PDZRN3Q9UPQ7 1066 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 RNF123Q5XPI4 1314 aa31.22■■■□□ 2.59
MIR3960-201ENST00000583311 TRIM28Q13263 835 aaKnown RBP31.21■■■□□ 2.59
MIR3960-201ENST00000583311 SUSD4Q5VX71 490 aa31.21■■■□□ 2.59
MIR3960-201ENST00000583311 NLRP10Q86W26 655 aa31.21■■■□□ 2.59
MIR3960-201ENST00000583311 MRPL50Q8N5N7 158 aaKnown RBP31.21■■■□□ 2.59
MIR3960-201ENST00000583311 ISCA1Q9BUE6 129 aa31.21■■■□□ 2.59
MIR3960-201ENST00000583311 UTP14AQ9BVJ6 771 aaKnown RBP31.21■■■□□ 2.59
MIR3960-201ENST00000583311 ADCY9O60503 1353 aa31.2■■■□□ 2.59
MIR3960-201ENST00000583311 PDE6BP35913 854 aa31.2■■■□□ 2.59
MIR3960-201ENST00000583311 MYD88Q99836 296 aa31.2■■■□□ 2.59
MIR3960-201ENST00000583311 SMC4Q9NTJ3 1288 aa31.2■■■□□ 2.59
MIR3960-201ENST00000583311 DCAF8L1A6NGE4 600 aa31.19■■■□□ 2.58
MIR3960-201ENST00000583311 ATP5J2-PTCD1G3V325 749 aa31.18■■■□□ 2.58
MIR3960-201ENST00000583311 NTSR2O95665 410 aa31.18■■■□□ 2.58
MIR3960-201ENST00000583311 PXDNLA1KZ92 1463 aa31.18■■■□□ 2.58
MIR3960-201ENST00000583311 DNAAF4Q8WXU2 420 aa31.17■■■□□ 2.58
MIR3960-201ENST00000583311 PTPRCP08575 1304 aa31.17■■■□□ 2.58
MIR3960-201ENST00000583311 CCDC191Q8NCU4 936 aa31.16■■■□□ 2.58
MIR3960-201ENST00000583311 BCL2L13Q9BXK5 485 aa31.16■■■□□ 2.58
MIR3960-201ENST00000583311 TRMT112Q9UI30 125 aaKnown RBP31.16■■■□□ 2.58
MIR3960-201ENST00000583311 RARSP54136 660 aaKnown RBP31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 675.6 ms