RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
ITGB4-208ENST00000582629 ZNF652Q9Y2D9 606 aa19.23■□□□□ 0.67
ITGB4-208ENST00000582629 LAMB4A4D0S4 1761 aa19.23■□□□□ 0.67
ITGB4-208ENST00000582629 C21orf2O43822 256 aa19.22■□□□□ 0.67
ITGB4-208ENST00000582629 NEFMP07197 916 aa19.22■□□□□ 0.67
ITGB4-208ENST00000582629 TAF7Q15545 349 aaPredicted RBP19.22■□□□□ 0.67
ITGB4-208ENST00000582629 DNAJC5GQ8N7S2 189 aa19.22■□□□□ 0.67
ITGB4-208ENST00000582629 CNKSR1Q969H4 720 aa19.22■□□□□ 0.67
ITGB4-208ENST00000582629 RGL2O15211 777 aa19.21■□□□□ 0.67
ITGB4-208ENST00000582629 IFFO2Q5TF58 517 aa19.21■□□□□ 0.67
ITGB4-208ENST00000582629 STYK1Q6J9G0 422 aa19.21■□□□□ 0.67
ITGB4-208ENST00000582629 SMC1BQ8NDV3 1235 aa19.21■□□□□ 0.67
ITGB4-208ENST00000582629 KDM3BQ7LBC6 1761 aa19.21■□□□□ 0.67
ITGB4-208ENST00000582629 SLX4Q8IY92 1834 aa19.21■□□□□ 0.67
ITGB4-208ENST00000582629 SRGNP10124 158 aa19.2■□□□□ 0.66
ITGB4-208ENST00000582629 NBPF5PQ86XG9 351 aaPredicted RBP19.2■□□□□ 0.66
ITGB4-208ENST00000582629 MASTLQ96GX5 879 aa19.2■□□□□ 0.66
ITGB4-208ENST00000582629 ZNF219Q9P2Y4 722 aaPredicted RBP19.2■□□□□ 0.66
ITGB4-208ENST00000582629 NBPF26B4DH59 902 aa19.19■□□□□ 0.66
ITGB4-208ENST00000582629 VEGFAP15692 232 aaPredicted RBP19.19■□□□□ 0.66
ITGB4-208ENST00000582629 NBPF10Q6P3W6 841 aaKnown RBP19.19■□□□□ 0.66
ITGB4-208ENST00000582629 NBPF15Q8N660 670 aa19.19■□□□□ 0.66
ITGB4-208ENST00000582629 LTBP3Q9NS15 1303 aa19.19■□□□□ 0.66
ITGB4-208ENST00000582629 SOGA3Q5TF21 947 aa19.18■□□□□ 0.66
ITGB4-208ENST00000582629 PRPF40BQ6NWY9 871 aaKnown RBP19.18■□□□□ 0.66
ITGB4-208ENST00000582629 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
ITGB4-208ENST00000582629 TAOK3Q9H2K8 898 aa19.18■□□□□ 0.66
ITGB4-208ENST00000582629 ERFEQ4G0M1 354 aa19.17■□□□□ 0.66
ITGB4-208ENST00000582629 DPY19L2Q6NUT2 758 aa19.17■□□□□ 0.66
ITGB4-208ENST00000582629 MIS18AQ9NYP9 233 aa19.17■□□□□ 0.66
ITGB4-208ENST00000582629 TPTE2Q6XPS3 522 aa19.16■□□□□ 0.66
ITGB4-208ENST00000582629 PLEKHF1Q96S99 279 aa19.16■□□□□ 0.66
ITGB4-208ENST00000582629 NIP7Q9Y221 180 aaKnown RBP eCLIP19.16■□□□□ 0.66
ITGB4-208ENST00000582629 KLRG1Q96E93 195 aa19.15■□□□□ 0.66
ITGB4-208ENST00000582629 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
ITGB4-208ENST00000582629 NPR1P16066 1061 aa19.14■□□□□ 0.65
ITGB4-208ENST00000582629 HTRA3P83110 453 aa19.14■□□□□ 0.65
ITGB4-208ENST00000582629 NFE2L2Q16236 605 aa19.14■□□□□ 0.65
ITGB4-208ENST00000582629 KLRG2A4D1S0 409 aaPredicted RBP19.13■□□□□ 0.65
ITGB4-208ENST00000582629 MAPK8IP3Q9UPT6 1336 aa19.13■□□□□ 0.65
ITGB4-208ENST00000582629 NUP98P52948 1817 aa19.12■□□□□ 0.65
ITGB4-208ENST00000582629 EIF4A1P60842 406 aaKnown RBP19.12■□□□□ 0.65
ITGB4-208ENST00000582629 HLFQ16534 295 aa19.12■□□□□ 0.65
ITGB4-208ENST00000582629 CCDC93Q567U6 631 aa19.12■□□□□ 0.65
ITGB4-208ENST00000582629 FAM177BA6PVY3 158 aa19.11■□□□□ 0.65
ITGB4-208ENST00000582629 POTECB2RU33 542 aa19.11■□□□□ 0.65
ITGB4-208ENST00000582629 C7orf43Q8WVR3 580 aa19.11■□□□□ 0.65
ITGB4-208ENST00000582629 ERVV-1B6SEH8 477 aa19.1■□□□□ 0.65
ITGB4-208ENST00000582629 JMYQ8N9B5 988 aa19.1■□□□□ 0.65
ITGB4-208ENST00000582629 THUMPD2Q9BTF0 503 aaKnown RBP19.1■□□□□ 0.65
ITGB4-208ENST00000582629 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
ITGB4-208ENST00000582629 KIF6Q6ZMV9 814 aa19.09■□□□□ 0.65
ITGB4-208ENST00000582629 NGEFQ8N5V2 710 aa19.09■□□□□ 0.65
ITGB4-208ENST00000582629 NYXQ9GZU5 481 aa19.09■□□□□ 0.65
ITGB4-208ENST00000582629 MAP3K15Q6ZN16 1313 aa19.08■□□□□ 0.65
ITGB4-208ENST00000582629 ALDH1B1P30837 517 aa19.08■□□□□ 0.64
ITGB4-208ENST00000582629 RRP7AQ9Y3A4 280 aaKnown RBP19.08■□□□□ 0.64
ITGB4-208ENST00000582629 DDNO94850 711 aaPredicted RBP19.07■□□□□ 0.64
ITGB4-208ENST00000582629 FKBP4Q02790 459 aaKnown RBP eCLIP19.07■□□□□ 0.64
ITGB4-208ENST00000582629 RALBP1Q15311 655 aa19.07■□□□□ 0.64
ITGB4-208ENST00000582629 TTLL7Q6ZT98 887 aa19.07■□□□□ 0.64
ITGB4-208ENST00000582629 RTKN2Q8IZC4 609 aa19.07■□□□□ 0.64
ITGB4-208ENST00000582629 SCN4AP35499 1836 aa19.07■□□□□ 0.64
ITGB4-208ENST00000582629 IBTKQ9P2D0 1353 aaPredicted RBP19.06■□□□□ 0.64
ITGB4-208ENST00000582629 ERBB4Q15303 1308 aa19.06■□□□□ 0.64
ITGB4-208ENST00000582629 ABCC12Q96J65 1359 aa19.06■□□□□ 0.64
ITGB4-208ENST00000582629 MYL6BP14649 208 aa19.05■□□□□ 0.64
ITGB4-208ENST00000582629 TSPYL4Q9UJ04 414 aa19.05■□□□□ 0.64
ITGB4-208ENST00000582629 RIC1Q4ADV7 1423 aa19.05■□□□□ 0.64
ITGB4-208ENST00000582629 IQCA1LA6NCM1 817 aa19.04■□□□□ 0.64
ITGB4-208ENST00000582629 CRY2Q49AN0 593 aa19.04■□□□□ 0.64
ITGB4-208ENST00000582629 NUTM1Q86Y26 1132 aa19.04■□□□□ 0.64
ITGB4-208ENST00000582629 ZNF277Q9NRM2 450 aaPredicted RBP19.04■□□□□ 0.64
ITGB4-208ENST00000582629 RIPK4P57078 832 aa19.03■□□□□ 0.64
ITGB4-208ENST00000582629 CHADLQ6NUI6 762 aa19.03■□□□□ 0.64
ITGB4-208ENST00000582629 OLFM4Q6UX06 510 aa19.03■□□□□ 0.64
ITGB4-208ENST00000582629 L3MBTL3Q96JM7 780 aaPredicted RBP19.03■□□□□ 0.64
ITGB4-208ENST00000582629 ZBTB3Q9H5J0 574 aa19.03■□□□□ 0.64
ITGB4-208ENST00000582629 GPTP24298 496 aa19.02■□□□□ 0.64
ITGB4-208ENST00000582629 LMOD3Q0VAK6 560 aa19.02■□□□□ 0.64
ITGB4-208ENST00000582629 BABAM1Q9NWV8 329 aa19.02■□□□□ 0.64
ITGB4-208ENST00000582629 UBN2Q6ZU65 1347 aa19.01■□□□□ 0.63
ITGB4-208ENST00000582629 IARSP41252 1262 aaKnown RBP19.01■□□□□ 0.63
ITGB4-208ENST00000582629 SUSD4Q5VX71 490 aa19.01■□□□□ 0.63
ITGB4-208ENST00000582629 ZNF34Q8IZ26 560 aa19.01■□□□□ 0.63
ITGB4-208ENST00000582629 SYNE4Q8N205 404 aa19.01■□□□□ 0.63
ITGB4-208ENST00000582629 RPGRQ92834 1020 aaKnown RBP19.01■□□□□ 0.63
ITGB4-208ENST00000582629 ZNF541Q9H0D2 1346 aa19■□□□□ 0.63
ITGB4-208ENST00000582629 SNED1Q8TER0 1413 aa19■□□□□ 0.63
ITGB4-208ENST00000582629 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
ITGB4-208ENST00000582629 GIGYF2Q6Y7W6 1299 aaKnown RBP19■□□□□ 0.63
ITGB4-208ENST00000582629 PSMD1Q99460 953 aa19■□□□□ 0.63
ITGB4-208ENST00000582629 NTSR2O95665 410 aa18.99■□□□□ 0.63
ITGB4-208ENST00000582629 POTEIP0CG38 1075 aa18.99■□□□□ 0.63
ITGB4-208ENST00000582629 POTEJP0CG39 1038 aa18.99■□□□□ 0.63
ITGB4-208ENST00000582629 HOXA10P31260 410 aaPredicted RBP18.99■□□□□ 0.63
ITGB4-208ENST00000582629 TMPOP42166 694 aaKnown RBP18.99■□□□□ 0.63
ITGB4-208ENST00000582629 PARP10Q53GL7 1025 aa18.99■□□□□ 0.63
ITGB4-208ENST00000582629 LDHDQ86WU2 507 aa18.99■□□□□ 0.63
ITGB4-208ENST00000582629 TAF1DQ9H5J8 278 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms