RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PDGFDQ9GZP0 370 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PTPRCP08575 1304 aa14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 TCERG1O14776 1098 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 MSH5O43196 834 aa14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PIP4K2AP48426 406 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 BRPF1P55201 1214 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PDIA6Q15084 440 aa14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 DZIP3Q86Y13 1208 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 MRPL50Q8N5N7 158 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ZNF652Q9Y2D9 606 aa14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ANXA1P04083 346 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 AIMP1Q12904 312 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 FLIIQ13045 1269 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 FKBP5Q13451 457 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 COPS6Q7L5N1 327 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 XAGE3Q8WTP9 111 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 SGIP1Q9BQI5 828 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 BCL2L13Q9BXK5 485 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 RGL2O15211 777 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 MS4A1P11836 297 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PROSER3Q2NL68 480 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 HSP90AB3PQ58FF7 597 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PHAXQ9H814 394 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 NARFQ9UHQ1 456 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 RIC3Q7Z5B4 369 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PLBD2Q8NHP8 589 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 API5Q9BZZ5 524 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 MAP3K15Q6ZN16 1313 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PNPLA7Q6ZV29 1317 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ZKSCAN2Q63HK3 967 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 SLC16A10Q8TF71 515 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ARHGAP45Q92619 1136 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 FRAT1Q92837 279 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 TBC1D2BQ9UPU7 963 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 USP42Q9H9J4 1324 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 PXDNLA1KZ92 1463 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 BCAR3O75815 825 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 CLEC4GQ6UXB4 293 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 TTLL7Q6ZT98 887 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 LRP10Q7Z4F1 713 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ZBTB3Q9H5J0 574 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 NOB1Q9ULX3 412 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 USPL1Q5W0Q7 1092 aa14.31□□□□□ -0.12
CDK5RAP3-210ENST00000578733 G2E3Q7L622 706 aa14.31□□□□□ -0.12
CDK5RAP3-210ENST00000578733 COL23A1Q86Y22 540 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-210ENST00000578733 COL24A1Q17RW2 1714 aa14.31□□□□□ -0.12
CDK5RAP3-210ENST00000578733 PI4KAP2A4QPH2 592 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 CAMTA2O94983 1202 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 GPR162Q16538 588 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ATF7IPQ6VMQ6 1270 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 GIGYF2Q6Y7W6 1299 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 FTSJ3Q8IY81 847 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 NLGN1Q8N2Q7 840 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 PI4KAP1Q8N8J0 262 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 MYH3P11055 1940 aa14.29□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
CDK5RAP3-210ENST00000578733 PARP10Q53GL7 1025 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 RNF123Q5XPI4 1314 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 SLC4A10Q6U841 1118 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 AMIGO3Q86WK7 504 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 METTL22Q9BUU2 404 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 SRP68Q9UHB9 627 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 LAMB2P55268 1798 aa14.27□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ADCY9O60503 1353 aa14.27□□□□□ -0.12
CDK5RAP3-210ENST00000578733 GYS1P13807 737 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 CCT4P50991 539 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 TCIRG1Q13488 830 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 SMIM5Q71RC9 77 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 SETDB2Q96T68 719 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 MYD88Q99836 296 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NPHP1O15259 732 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 POLD1P28340 1107 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 RRP1P56182 461 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 HLFQ16534 295 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 PPP1R42Q7Z4L9 355 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 DZIP1LQ8IYY4 767 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 SRCIN1Q9C0H9 1055 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NRXN2Q9P2S2 1712 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 F6X3S4 739 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 TRIM27P14373 513 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 FKBP8Q14318 412 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NYXQ9GZU5 481 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 CHMP4BQ9H444 224 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 PARP3Q9Y6F1 533 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 GOLGB1Q14789 3259 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 ABCC4O15439 1325 aa14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 ALDH1L1O75891 902 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms