RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 VEGFAP15692 232 aaPredicted RBP16.7■□□□□ 0.26
SMARCD2-207ENST00000578234 PIP4K2AP48426 406 aaPredicted RBP16.7■□□□□ 0.26
SMARCD2-207ENST00000578234 ST5P78524 1137 aa16.7■□□□□ 0.26
SMARCD2-207ENST00000578234 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
SMARCD2-207ENST00000578234 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
SMARCD2-207ENST00000578234 STYK1Q6J9G0 422 aa16.69■□□□□ 0.26
SMARCD2-207ENST00000578234 DPY19L2Q6NUT2 758 aa16.69■□□□□ 0.26
SMARCD2-207ENST00000578234 CNKSR1Q969H4 720 aa16.69■□□□□ 0.26
SMARCD2-207ENST00000578234 ZNF652Q9Y2D9 606 aa16.69■□□□□ 0.26
SMARCD2-207ENST00000578234 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
SMARCD2-207ENST00000578234 COL11A2P13942 1736 aaPredicted RBP16.68■□□□□ 0.26
SMARCD2-207ENST00000578234 FER1L6Q2WGJ9 1857 aa16.68■□□□□ 0.26
SMARCD2-207ENST00000578234 NBPF26B4DH59 902 aa16.68■□□□□ 0.26
SMARCD2-207ENST00000578234 CAPN15O75808 1086 aa16.68■□□□□ 0.26
SMARCD2-207ENST00000578234 NEFMP07197 916 aa16.68■□□□□ 0.26
SMARCD2-207ENST00000578234 NBPF10Q6P3W6 841 aaKnown RBP16.68■□□□□ 0.26
SMARCD2-207ENST00000578234 NBPF15Q8N660 670 aa16.68■□□□□ 0.26
SMARCD2-207ENST00000578234 KLRG1Q96E93 195 aa16.68■□□□□ 0.26
SMARCD2-207ENST00000578234 LTBP3Q9NS15 1303 aa16.68■□□□□ 0.26
SMARCD2-207ENST00000578234 FAM177BA6PVY3 158 aa16.67■□□□□ 0.26
SMARCD2-207ENST00000578234 ERFEQ4G0M1 354 aa16.67■□□□□ 0.26
SMARCD2-207ENST00000578234 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
SMARCD2-207ENST00000578234 MASTLQ96GX5 879 aa16.67■□□□□ 0.26
SMARCD2-207ENST00000578234 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
SMARCD2-207ENST00000578234 PRPF40BQ6NWY9 871 aaKnown RBP16.66■□□□□ 0.26
SMARCD2-207ENST00000578234 TPTE2Q6XPS3 522 aa16.66■□□□□ 0.26
SMARCD2-207ENST00000578234 TIAM2Q8IVF5 1701 aa16.66■□□□□ 0.26
SMARCD2-207ENST00000578234 DICER1Q9UPY3 1922 aaKnown RBP16.66■□□□□ 0.26
SMARCD2-207ENST00000578234 SLX4Q8IY92 1834 aa16.66■□□□□ 0.26
SMARCD2-207ENST00000578234 KLRG2A4D1S0 409 aaPredicted RBP16.65■□□□□ 0.26
SMARCD2-207ENST00000578234 POTECB2RU33 542 aa16.65■□□□□ 0.26
SMARCD2-207ENST00000578234 PNISRQ8TF01 805 aaKnown RBP16.65■□□□□ 0.26
SMARCD2-207ENST00000578234 TAOK3Q9H2K8 898 aa16.65■□□□□ 0.26
SMARCD2-207ENST00000578234 MIS18AQ9NYP9 233 aa16.65■□□□□ 0.26
SMARCD2-207ENST00000578234 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
SMARCD2-207ENST00000578234 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMARCD2-207ENST00000578234 NPR1P16066 1061 aa16.63■□□□□ 0.25
SMARCD2-207ENST00000578234 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
SMARCD2-207ENST00000578234 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
SMARCD2-207ENST00000578234 JMYQ8N9B5 988 aa16.63■□□□□ 0.25
SMARCD2-207ENST00000578234 C7orf43Q8WVR3 580 aa16.63■□□□□ 0.25
SMARCD2-207ENST00000578234 DLG5Q8TDM6 1919 aa16.62■□□□□ 0.25
SMARCD2-207ENST00000578234 ARFGEF2Q9Y6D5 1785 aa16.62■□□□□ 0.25
SMARCD2-207ENST00000578234 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
SMARCD2-207ENST00000578234 NFE2L2Q16236 605 aa16.61■□□□□ 0.25
SMARCD2-207ENST00000578234 HLFQ16534 295 aa16.61■□□□□ 0.25
SMARCD2-207ENST00000578234 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
SMARCD2-207ENST00000578234 ERVV-1B6SEH8 477 aa16.6■□□□□ 0.25
SMARCD2-207ENST00000578234 EIF4A1P60842 406 aaKnown RBP16.6■□□□□ 0.25
SMARCD2-207ENST00000578234 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
SMARCD2-207ENST00000578234 COL13A1Q5TAT6 717 aaPredicted RBP16.6■□□□□ 0.25
SMARCD2-207ENST00000578234 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
SMARCD2-207ENST00000578234 PCNTO95613 3336 aa16.59■□□□□ 0.25
SMARCD2-207ENST00000578234 DDNO94850 711 aaPredicted RBP16.59■□□□□ 0.25
SMARCD2-207ENST00000578234 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
SMARCD2-207ENST00000578234 TNS4Q8IZW8 715 aa16.58■□□□□ 0.24
SMARCD2-207ENST00000578234 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
SMARCD2-207ENST00000578234 CLEC11AQ9Y240 323 aa16.58■□□□□ 0.24
SMARCD2-207ENST00000578234 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
SMARCD2-207ENST00000578234 MAPK8IP3Q9UPT6 1336 aa16.57■□□□□ 0.24
SMARCD2-207ENST00000578234 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMARCD2-207ENST00000578234 DDX10Q13206 875 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-207ENST00000578234 RTKN2Q8IZC4 609 aa16.57■□□□□ 0.24
SMARCD2-207ENST00000578234 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-207ENST00000578234 RRP7AQ9Y3A4 280 aaKnown RBP16.57■□□□□ 0.24
SMARCD2-207ENST00000578234 CRY2Q49AN0 593 aa16.56■□□□□ 0.24
SMARCD2-207ENST00000578234 EAPPQ56P03 285 aaPredicted RBP16.56■□□□□ 0.24
SMARCD2-207ENST00000578234 MKRN1Q9UHC7 482 aaKnown RBP16.56■□□□□ 0.24
SMARCD2-207ENST00000578234 NUP98P52948 1817 aa16.56■□□□□ 0.24
SMARCD2-207ENST00000578234 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
SMARCD2-207ENST00000578234 IQCA1LA6NCM1 817 aa16.55■□□□□ 0.24
SMARCD2-207ENST00000578234 MYL6BP14649 208 aa16.55■□□□□ 0.24
SMARCD2-207ENST00000578234 CHADLQ6NUI6 762 aa16.55■□□□□ 0.24
SMARCD2-207ENST00000578234 KIF6Q6ZMV9 814 aa16.55■□□□□ 0.24
SMARCD2-207ENST00000578234 TTLL7Q6ZT98 887 aa16.55■□□□□ 0.24
SMARCD2-207ENST00000578234 ZNF316A6NFI3 1004 aaPredicted RBP16.54■□□□□ 0.24
SMARCD2-207ENST00000578234 HSPA1AP0DMV8 641 aaKnown RBP16.54■□□□□ 0.24
SMARCD2-207ENST00000578234 HSPA1BP0DMV9 641 aaKnown RBP16.54■□□□□ 0.24
SMARCD2-207ENST00000578234 RALBP1Q15311 655 aa16.54■□□□□ 0.24
SMARCD2-207ENST00000578234 L3MBTL3Q96JM7 780 aaPredicted RBP16.54■□□□□ 0.24
SMARCD2-207ENST00000578234 ZNF277Q9NRM2 450 aaPredicted RBP16.54■□□□□ 0.24
SMARCD2-207ENST00000578234 TCERG1O14776 1098 aaKnown RBP16.53■□□□□ 0.24
SMARCD2-207ENST00000578234 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
SMARCD2-207ENST00000578234 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
SMARCD2-207ENST00000578234 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
SMARCD2-207ENST00000578234 NUTM1Q86Y26 1132 aa16.53■□□□□ 0.24
SMARCD2-207ENST00000578234 BABAM1Q9NWV8 329 aa16.53■□□□□ 0.24
SMARCD2-207ENST00000578234 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
SMARCD2-207ENST00000578234 HOXA10P31260 410 aaPredicted RBP16.52■□□□□ 0.24
SMARCD2-207ENST00000578234 RIPK4P57078 832 aa16.52■□□□□ 0.24
SMARCD2-207ENST00000578234 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.24
SMARCD2-207ENST00000578234 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.24
SMARCD2-207ENST00000578234 ZNF34Q8IZ26 560 aa16.52■□□□□ 0.24
SMARCD2-207ENST00000578234 ZBTB3Q9H5J0 574 aa16.52■□□□□ 0.24
SMARCD2-207ENST00000578234 TSPYL4Q9UJ04 414 aa16.52■□□□□ 0.24
SMARCD2-207ENST00000578234 RIC1Q4ADV7 1423 aa16.52■□□□□ 0.23
SMARCD2-207ENST00000578234 SCN4AP35499 1836 aa16.52■□□□□ 0.23
SMARCD2-207ENST00000578234 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
SMARCD2-207ENST00000578234 UBN2Q6ZU65 1347 aa16.51■□□□□ 0.23
SMARCD2-207ENST00000578234 GPTP24298 496 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms