RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 ZHX3Q9H4I2 956 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
SEC22B-201ENST00000578049 IFFO1Q0D2I5 559 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 KDM4AO75164 1064 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 GNG11P61952 73 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 MAP3K12Q12852 859 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.39□□□□□ -0.433e-9■□□□□ 9.8
SEC22B-201ENST00000578049 ZNF213O14771 459 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 IDH1O75874 414 aaKnown RBP12.39□□□□□ -0.43
SEC22B-201ENST00000578049 PRDM10Q9NQV6 1147 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 LRP2BPQ9P2M1 347 aa12.39□□□□□ -0.43
SEC22B-201ENST00000578049 IGHMBP2P38935 993 aaKnown RBP12.38□□□□□ -0.43
SEC22B-201ENST00000578049 IFI16Q16666 785 aaKnown RBP12.38□□□□□ -0.43
SEC22B-201ENST00000578049 MTMR7Q9Y216 660 aa12.38□□□□□ -0.43
SEC22B-201ENST00000578049 SKILP12757 684 aa12.38□□□□□ -0.43
SEC22B-201ENST00000578049 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
SEC22B-201ENST00000578049 TMEM266Q2M3C6 531 aa12.38□□□□□ -0.43
SEC22B-201ENST00000578049 ATL3Q6DD88 541 aa12.38□□□□□ -0.43
SEC22B-201ENST00000578049 RMND1Q9NWS8 449 aa12.38□□□□□ -0.43
SEC22B-201ENST00000578049 TRMT1Q9NXH9 659 aaKnown RBP12.38□□□□□ -0.43
SEC22B-201ENST00000578049 SLC12A7Q9Y666 1083 aa12.38□□□□□ -0.43
SEC22B-201ENST00000578049 NEK1Q96PY6 1258 aa12.38□□□□□ -0.43
SEC22B-201ENST00000578049 BOLA2Q9H3K6 86 aa12.38□□□□□ -0.43
SEC22B-201ENST00000578049 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
SEC22B-201ENST00000578049 CEP112Q8N8E3 955 aa12.38□□□□□ -0.43
SEC22B-201ENST00000578049 V9GYY5 206 aaPredicted RBP12.38□□□□□ -0.43
SEC22B-201ENST00000578049 SSRP1Q08945 709 aaKnown RBP12.38□□□□□ -0.43
SEC22B-201ENST00000578049 SSBP05455 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
SEC22B-201ENST00000578049 TTF1Q15361 905 aaPredicted RBP12.37□□□□□ -0.43
SEC22B-201ENST00000578049 ANKRD24Q8TF21 1146 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 CCDC12Q8WUD4 166 aaPredicted RBP12.37□□□□□ -0.43
SEC22B-201ENST00000578049 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
SEC22B-201ENST00000578049 GOLGA8BA8MQT2 603 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 CDK13Q14004 1512 aaKnown RBP12.37□□□□□ -0.43
SEC22B-201ENST00000578049 ASXL1Q8IXJ9 1541 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 IARSP41252 1262 aaKnown RBP12.37□□□□□ -0.43
SEC22B-201ENST00000578049 LMAN1P49257 510 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 RAI14Q9P0K7 980 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 CTAGE15A4D2H0 777 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 ANKRD62A6NC57 917 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 CTAGE8P0CG41 777 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 CTAGE6Q86UF2 777 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 CTAGE4Q8IX94 777 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
SEC22B-201ENST00000578049 ZFYP08048 801 aaPredicted RBP12.37□□□□□ -0.43
SEC22B-201ENST00000578049 SMAP1Q8IYB5 467 aaPredicted RBP12.37□□□□□ -0.43
SEC22B-201ENST00000578049 KLHL10Q6JEL2 608 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 BBXQ8WY36 941 aaPredicted RBP12.36□□□□□ -0.43
SEC22B-201ENST00000578049 MRPS27Q92552 414 aaKnown RBP12.36□□□□□ -0.43
SEC22B-201ENST00000578049 A0A087WZG4 1122 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 STARD3NLO95772 234 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 MYL6BP14649 208 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 METTL24Q5JXM2 366 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 SEC63Q9UGP8 760 aaKnown RBP12.36□□□□□ -0.43
SEC22B-201ENST00000578049 GOLGA8AA7E2F4 631 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 ESYT1Q9BSJ8 1104 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 ORC3Q9UBD5 711 aaPredicted RBP12.36□□□□□ -0.43
SEC22B-201ENST00000578049 F13A1P00488 732 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 CYLC1P35663 651 aaPredicted RBP12.36□□□□□ -0.43
SEC22B-201ENST00000578049 SPECC1Q5M775 1068 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 CYB5RLQ6IPT4 315 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 SDSP20132 328 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 MCM10Q7L590 875 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 CCDC186Q7Z3E2 898 aa12.36□□□□□ -0.43
SEC22B-201ENST00000578049 THUMPD2Q9BTF0 503 aaKnown RBP12.36□□□□□ -0.43
SEC22B-201ENST00000578049 CCDC194A0A1B0GVG4 234 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 PDE1AP54750 535 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 PIP4K2BP78356 416 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 PCDHB15Q9Y5E8 787 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 SOS1Q07889 1333 aaPredicted RBP12.35□□□□□ -0.43
SEC22B-201ENST00000578049 OPA1O60313 960 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 CETN1Q12798 172 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 OGFRQ9NZT2 677 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.35□□□□□ -0.43
SEC22B-201ENST00000578049 KIF14Q15058 1648 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 DNAI2Q9GZS0 605 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 GDPD2Q9HCC8 539 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 TCP11L1Q9NUJ3 509 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 SEPT11Q9NVA2 429 aaKnown RBP12.35□□□□□ -0.43
SEC22B-201ENST00000578049 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 ZMYM3Q14202 1370 aa12.35□□□□□ -0.43
SEC22B-201ENST00000578049 ARFGAP2Q8N6H7 521 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 TFIP11Q9UBB9 837 aaKnown RBP12.34□□□□□ -0.43
SEC22B-201ENST00000578049 PROSER2Q86WR7 435 aaPredicted RBP12.34□□□□□ -0.43
SEC22B-201ENST00000578049 TMTC2Q8N394 836 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 NCOA7Q8NI08 942 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
SEC22B-201ENST00000578049 RBM27Q9P2N5 1060 aaKnown RBP12.34□□□□□ -0.43
SEC22B-201ENST00000578049 KIF5BP33176 963 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 UBASH3AP57075 661 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 CC2D2AQ9P2K1 1620 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 RAD50Q92878 1312 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 A6NNZ2 444 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 SYKP43405 635 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 TMEM132AQ24JP5 1023 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 TUBB8Q3ZCM7 444 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 RHPN1Q8TCX5 695 aa12.34□□□□□ -0.43
SEC22B-201ENST00000578049 CCDC172P0C7W6 258 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms