RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 SLX4Q8IY92 1834 aa17.54■□□□□ 0.4
TSR1-205ENST00000576202 HSPA1AP0DMV8 641 aaKnown RBP17.53■□□□□ 0.4
TSR1-205ENST00000576202 HSPA1BP0DMV9 641 aaKnown RBP17.53■□□□□ 0.4
TSR1-205ENST00000576202 SRGNP10124 158 aa17.53■□□□□ 0.4
TSR1-205ENST00000576202 SOGA3Q5TF21 947 aa17.53■□□□□ 0.4
TSR1-205ENST00000576202 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
TSR1-205ENST00000576202 DZIP3Q86Y13 1208 aaKnown RBP17.53■□□□□ 0.4
TSR1-205ENST00000576202 KCNQ3O43525 872 aa17.52■□□□□ 0.4
TSR1-205ENST00000576202 CHADLQ6NUI6 762 aa17.52■□□□□ 0.4
TSR1-205ENST00000576202 MASTLQ96GX5 879 aa17.52■□□□□ 0.4
TSR1-205ENST00000576202 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.4
TSR1-205ENST00000576202 CAPN15O75808 1086 aa17.51■□□□□ 0.39
TSR1-205ENST00000576202 DDNO94850 711 aaPredicted RBP17.51■□□□□ 0.39
TSR1-205ENST00000576202 PRKAR2BP31323 418 aa17.51■□□□□ 0.39
TSR1-205ENST00000576202 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
TSR1-205ENST00000576202 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
TSR1-205ENST00000576202 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
TSR1-205ENST00000576202 CLEC4GQ6UXB4 293 aa17.49■□□□□ 0.39
TSR1-205ENST00000576202 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
TSR1-205ENST00000576202 CFAP53Q96M91 514 aa17.49■□□□□ 0.39
TSR1-205ENST00000576202 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
TSR1-205ENST00000576202 ZNF652Q9Y2D9 606 aa17.49■□□□□ 0.39
TSR1-205ENST00000576202 POTEIP0CG38 1075 aa17.48■□□□□ 0.39
TSR1-205ENST00000576202 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
TSR1-205ENST00000576202 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
TSR1-205ENST00000576202 IQCA1LA6NCM1 817 aa17.47■□□□□ 0.39
TSR1-205ENST00000576202 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
TSR1-205ENST00000576202 CCDC93Q567U6 631 aa17.47■□□□□ 0.39
TSR1-205ENST00000576202 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
TSR1-205ENST00000576202 SCN4AP35499 1836 aa17.47■□□□□ 0.39
TSR1-205ENST00000576202 NPR1P16066 1061 aa17.46■□□□□ 0.39
TSR1-205ENST00000576202 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
TSR1-205ENST00000576202 L3MBTL3Q96JM7 780 aaPredicted RBP17.46■□□□□ 0.39
TSR1-205ENST00000576202 MKRN1Q9UHC7 482 aaKnown RBP17.46■□□□□ 0.39
TSR1-205ENST00000576202 NUDCQ9Y266 331 aa17.46■□□□□ 0.39
TSR1-205ENST00000576202 KLRG2A4D1S0 409 aaPredicted RBP17.45■□□□□ 0.38
TSR1-205ENST00000576202 RGL2O15211 777 aa17.45■□□□□ 0.38
TSR1-205ENST00000576202 TPTE2Q6XPS3 522 aa17.45■□□□□ 0.38
TSR1-205ENST00000576202 MCM10Q7L590 875 aa17.45■□□□□ 0.38
TSR1-205ENST00000576202 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.38
TSR1-205ENST00000576202 LDHDQ86WU2 507 aa17.44■□□□□ 0.38
TSR1-205ENST00000576202 TAF1DQ9H5J8 278 aaPredicted RBP17.44■□□□□ 0.38
TSR1-205ENST00000576202 NIP7Q9Y221 180 aaKnown RBP eCLIP17.44■□□□□ 0.38
TSR1-205ENST00000576202 PASKQ96RG2 1323 aa17.44■□□□□ 0.38
TSR1-205ENST00000576202 NBPF26B4DH59 902 aa17.43■□□□□ 0.38
TSR1-205ENST00000576202 U2AF1L5P0DN76 240 aaPredicted RBP17.43■□□□□ 0.38
TSR1-205ENST00000576202 U2AF1Q01081 240 aaKnown RBP eCLIP17.43■□□□□ 0.38
TSR1-205ENST00000576202 NBPF10Q6P3W6 841 aaKnown RBP17.43■□□□□ 0.38
TSR1-205ENST00000576202 NBPF15Q8N660 670 aa17.43■□□□□ 0.38
TSR1-205ENST00000576202 CNTNAP1P78357 1384 aa17.42■□□□□ 0.38
TSR1-205ENST00000576202 RTKN2Q8IZC4 609 aa17.42■□□□□ 0.38
TSR1-205ENST00000576202 ZNF277Q9NRM2 450 aaPredicted RBP17.42■□□□□ 0.38
TSR1-205ENST00000576202 ZNF541Q9H0D2 1346 aa17.42■□□□□ 0.38
TSR1-205ENST00000576202 LAMB4A4D0S4 1761 aa17.41■□□□□ 0.38
TSR1-205ENST00000576202 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
TSR1-205ENST00000576202 HTATSF1O43719 755 aaKnown RBP17.41■□□□□ 0.38
TSR1-205ENST00000576202 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
TSR1-205ENST00000576202 OLFM4Q6UX06 510 aa17.41■□□□□ 0.38
TSR1-205ENST00000576202 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
TSR1-205ENST00000576202 ALDH1B1P30837 517 aa17.4■□□□□ 0.38
TSR1-205ENST00000576202 HACL1Q9UJ83 578 aa17.4■□□□□ 0.38
TSR1-205ENST00000576202 ADAMTSL1Q8N6G6 1762 aa17.39■□□□□ 0.37
TSR1-205ENST00000576202 ITGBL1O95965 494 aaPredicted RBP17.39■□□□□ 0.37
TSR1-205ENST00000576202 HLFQ16534 295 aa17.39■□□□□ 0.37
TSR1-205ENST00000576202 EAPPQ56P03 285 aaPredicted RBP17.39■□□□□ 0.37
TSR1-205ENST00000576202 TMEM88BA6NKF7 163 aa17.38■□□□□ 0.37
TSR1-205ENST00000576202 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
TSR1-205ENST00000576202 IARSP41252 1262 aaKnown RBP17.38■□□□□ 0.37
TSR1-205ENST00000576202 TAF7Q15545 349 aaPredicted RBP17.38■□□□□ 0.37
TSR1-205ENST00000576202 FZD9O00144 591 aa17.37■□□□□ 0.37
TSR1-205ENST00000576202 FOXN1O15353 648 aa17.37■□□□□ 0.37
TSR1-205ENST00000576202 EPHX2P34913 555 aa17.37■□□□□ 0.37
TSR1-205ENST00000576202 PNMA8AQ86V59 439 aaPredicted RBP17.37■□□□□ 0.37
TSR1-205ENST00000576202 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
TSR1-205ENST00000576202 CRY2Q49AN0 593 aa17.36■□□□□ 0.37
TSR1-205ENST00000576202 GPC2Q8N158 579 aa17.36■□□□□ 0.37
TSR1-205ENST00000576202 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
TSR1-205ENST00000576202 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
TSR1-205ENST00000576202 RNF123Q5XPI4 1314 aa17.36■□□□□ 0.37
TSR1-205ENST00000576202 SNED1Q8TER0 1413 aa17.36■□□□□ 0.37
TSR1-205ENST00000576202 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
TSR1-205ENST00000576202 VEGFBP49765 207 aa17.35■□□□□ 0.37
TSR1-205ENST00000576202 PSMD1Q99460 953 aa17.35■□□□□ 0.37
TSR1-205ENST00000576202 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
TSR1-205ENST00000576202 ABCC12Q96J65 1359 aa17.35■□□□□ 0.37
TSR1-205ENST00000576202 ERVV-1B6SEH8 477 aa17.34■□□□□ 0.37
TSR1-205ENST00000576202 NUP98P52948 1817 aa17.34■□□□□ 0.37
TSR1-205ENST00000576202 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
TSR1-205ENST00000576202 AIDAQ96BJ3 306 aa17.34■□□□□ 0.37
TSR1-205ENST00000576202 PRDM10Q9NQV6 1147 aa17.34■□□□□ 0.37
TSR1-205ENST00000576202 RIC1Q4ADV7 1423 aa17.33■□□□□ 0.36
TSR1-205ENST00000576202 MAP3K15Q6ZN16 1313 aa17.33■□□□□ 0.36
TSR1-205ENST00000576202 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.36
TSR1-205ENST00000576202 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.36
TSR1-205ENST00000576202 NUTM1Q86Y26 1132 aa17.33■□□□□ 0.36
TSR1-205ENST00000576202 CNTROBQ8N137 903 aa17.33■□□□□ 0.36
TSR1-205ENST00000576202 NGEFQ8N5V2 710 aa17.33■□□□□ 0.36
TSR1-205ENST00000576202 PNISRQ8TF01 805 aaKnown RBP17.33■□□□□ 0.36
TSR1-205ENST00000576202 DLG5Q8TDM6 1919 aa17.33■□□□□ 0.36
TSR1-205ENST00000576202 IBTKQ9P2D0 1353 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms