RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 NISCHQ9Y2I1 1504 aa33.09■■■□□ 2.89
TSR1-205ENST00000576202 ABCC9O60706 1549 aa29.97■■■□□ 2.39
TSR1-205ENST00000576202 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
TSR1-205ENST00000576202 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
TSR1-205ENST00000576202 DNAJC5BQ9UF47 199 aa28.27■■■□□ 2.12
TSR1-205ENST00000576202 NACADO15069 1562 aa28.21■■■□□ 2.11
TSR1-205ENST00000576202 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
TSR1-205ENST00000576202 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
TSR1-205ENST00000576202 UNC13AQ9UPW8 1703 aa27.82■■■□□ 2.04
TSR1-205ENST00000576202 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
TSR1-205ENST00000576202 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
TSR1-205ENST00000576202 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
TSR1-205ENST00000576202 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
TSR1-205ENST00000576202 SHROOM4Q9ULL8 1493 aa27.27■■□□□ 1.96
TSR1-205ENST00000576202 SCRIBQ14160 1630 aa27.13■■□□□ 1.93
TSR1-205ENST00000576202 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
TSR1-205ENST00000576202 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
TSR1-205ENST00000576202 EIF4G1Q04637 1599 aaKnown RBP26.98■■□□□ 1.91
TSR1-205ENST00000576202 DNAJC5Q9H3Z4 198 aa26.12■■□□□ 1.77
TSR1-205ENST00000576202 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
TSR1-205ENST00000576202 CUX2O14529 1486 aa25.93■■□□□ 1.74
TSR1-205ENST00000576202 ATAD2BQ9ULI0 1458 aa25.93■■□□□ 1.74
TSR1-205ENST00000576202 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
TSR1-205ENST00000576202 SMARCA4P51532 1647 aa25.87■■□□□ 1.73
TSR1-205ENST00000576202 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
TSR1-205ENST00000576202 HMGXB3Q12766 1538 aa25.84■■□□□ 1.73
TSR1-205ENST00000576202 BAZ1AQ9NRL2 1556 aaPredicted RBP25.72■■□□□ 1.71
TSR1-205ENST00000576202 NESP48681 1621 aa25.69■■□□□ 1.7
TSR1-205ENST00000576202 BAZ1BQ9UIG0 1483 aaKnown RBP25.68■■□□□ 1.7
TSR1-205ENST00000576202 PEG3Q9GZU2 1588 aa25.63■■□□□ 1.69
TSR1-205ENST00000576202 LAMC3Q9Y6N6 1575 aa25.51■■□□□ 1.67
TSR1-205ENST00000576202 THOC2Q8NI27 1593 aaKnown RBP25.5■■□□□ 1.67
TSR1-205ENST00000576202 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
TSR1-205ENST00000576202 KIF21AQ7Z4S6 1674 aa25.38■■□□□ 1.65
TSR1-205ENST00000576202 PDS5BQ9NTI5 1447 aa25.35■■□□□ 1.65
TSR1-205ENST00000576202 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
TSR1-205ENST00000576202 WIZO95785 1651 aa25.18■■□□□ 1.62
TSR1-205ENST00000576202 MRC2Q9UBG0 1479 aa25.15■■□□□ 1.62
TSR1-205ENST00000576202 WDR62O43379 1518 aa25.1■■□□□ 1.61
TSR1-205ENST00000576202 CEP164Q9UPV0 1460 aa25.01■■□□□ 1.59
TSR1-205ENST00000576202 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
TSR1-205ENST00000576202 CFTRP13569 1480 aa24.91■■□□□ 1.58
TSR1-205ENST00000576202 TRIM41Q8WV44 630 aa24.89■■□□□ 1.58
TSR1-205ENST00000576202 RSF1Q96T23 1441 aaPredicted RBP24.88■■□□□ 1.57
TSR1-205ENST00000576202 TOP2AP11388 1531 aaKnown RBP24.86■■□□□ 1.57
TSR1-205ENST00000576202 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
TSR1-205ENST00000576202 OSCARQ8IYS5 282 aa24.69■■□□□ 1.54
TSR1-205ENST00000576202 PRDM2Q13029 1718 aa24.67■■□□□ 1.54
TSR1-205ENST00000576202 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
TSR1-205ENST00000576202 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
TSR1-205ENST00000576202 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
TSR1-205ENST00000576202 TOPBP1Q92547 1522 aa24.45■■□□□ 1.51
TSR1-205ENST00000576202 RIMBP3CA6NJZ7 1639 aa24.42■■□□□ 1.5
TSR1-205ENST00000576202 RIMBP3BA6NNM3 1639 aa24.42■■□□□ 1.5
TSR1-205ENST00000576202 RIMBP3Q9UFD9 1639 aa24.42■■□□□ 1.5
TSR1-205ENST00000576202 ABCC8Q09428 1581 aa24.41■■□□□ 1.5
TSR1-205ENST00000576202 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
TSR1-205ENST00000576202 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
TSR1-205ENST00000576202 ARHGEF11O15085 1522 aa24.31■■□□□ 1.48
TSR1-205ENST00000576202 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
TSR1-205ENST00000576202 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.473e-8■■■■■ 49.5
TSR1-205ENST00000576202 CHD1O14646 1710 aa24.21■■□□□ 1.47
TSR1-205ENST00000576202 POLA1P09884 1462 aaPredicted RBP24.19■■□□□ 1.46
TSR1-205ENST00000576202 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
TSR1-205ENST00000576202 FBLN2P98095 1184 aa24.1■■□□□ 1.45
TSR1-205ENST00000576202 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
TSR1-205ENST00000576202 SOGA1O94964 1423 aa24.07■■□□□ 1.44
TSR1-205ENST00000576202 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
TSR1-205ENST00000576202 TDRD9Q8NDG6 1382 aaKnown RBP24.05■■□□□ 1.44
TSR1-205ENST00000576202 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
TSR1-205ENST00000576202 FGD5Q6ZNL6 1462 aa24.02■■□□□ 1.44
TSR1-205ENST00000576202 SNAPC4Q5SXM2 1469 aa23.99■■□□□ 1.43
TSR1-205ENST00000576202 CUX1P39880 1505 aa23.96■■□□□ 1.43
TSR1-205ENST00000576202 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
TSR1-205ENST00000576202 MAGI1Q96QZ7 1491 aaPredicted RBP23.93■■□□□ 1.42
TSR1-205ENST00000576202 TRHP20396 242 aaPredicted RBP23.92■■□□□ 1.42
TSR1-205ENST00000576202 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
TSR1-205ENST00000576202 GRIN2BQ13224 1484 aa23.9■■□□□ 1.42
TSR1-205ENST00000576202 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
TSR1-205ENST00000576202 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
TSR1-205ENST00000576202 PBRM1Q86U86 1689 aa23.81■■□□□ 1.4
TSR1-205ENST00000576202 GAPVD1Q14C86 1478 aa23.79■■□□□ 1.4
TSR1-205ENST00000576202 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
TSR1-205ENST00000576202 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
TSR1-205ENST00000576202 SUPT5HO00267 1087 aaKnown RBP23.6■■□□□ 1.37
TSR1-205ENST00000576202 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
TSR1-205ENST00000576202 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
TSR1-205ENST00000576202 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
TSR1-205ENST00000576202 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
TSR1-205ENST00000576202 TOP2BQ02880 1626 aa23.54■■□□□ 1.36
TSR1-205ENST00000576202 ERCC6L2Q5T890 1561 aa23.53■■□□□ 1.36
TSR1-205ENST00000576202 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
TSR1-205ENST00000576202 NUP160Q12769 1436 aa23.52■■□□□ 1.36
TSR1-205ENST00000576202 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
TSR1-205ENST00000576202 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
TSR1-205ENST00000576202 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
TSR1-205ENST00000576202 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
TSR1-205ENST00000576202 PRG4Q92954 1404 aaPredicted RBP23.31■■□□□ 1.32
TSR1-205ENST00000576202 JPH4Q96JJ6 628 aa23.25■■□□□ 1.31
TSR1-205ENST00000576202 KIF13AQ9H1H9 1805 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms