RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 DLEC1Q9Y238 1755 aa21.64■■□□□ 1.06
TMEM88-202ENST00000574668 KCNQ3O43525 872 aa21.64■■□□□ 1.05
TMEM88-202ENST00000574668 STARD3NLO95772 234 aa21.64■■□□□ 1.05
TMEM88-202ENST00000574668 TBC1D9BQ66K14 1250 aa21.64■■□□□ 1.05
TMEM88-202ENST00000574668 CCDC24Q8N4L8 307 aa21.64■■□□□ 1.05
TMEM88-202ENST00000574668 FMNL2Q96PY5 1086 aa21.64■■□□□ 1.05
TMEM88-202ENST00000574668 TNRC6CQ9HCJ0 1690 aaKnown RBP21.63■■□□□ 1.05
TMEM88-202ENST00000574668 H0YIN7 160 aa21.63■■□□□ 1.05
TMEM88-202ENST00000574668 LMNB1P20700 586 aa21.63■■□□□ 1.05
TMEM88-202ENST00000574668 GNAI1P63096 354 aa21.63■■□□□ 1.05
TMEM88-202ENST00000574668 TBC1D2BQ9UPU7 963 aa21.63■■□□□ 1.05
TMEM88-202ENST00000574668 SIPA1L3O60292 1781 aaPredicted RBP21.63■■□□□ 1.05
TMEM88-202ENST00000574668 HEG1Q9ULI3 1381 aa21.62■■□□□ 1.05
TMEM88-202ENST00000574668 NFKBIEO00221 500 aa21.62■■□□□ 1.05
TMEM88-202ENST00000574668 WDR63Q8IWG1 891 aa21.62■■□□□ 1.05
TMEM88-202ENST00000574668 CFAP44Q96MT7 982 aa21.62■■□□□ 1.05
TMEM88-202ENST00000574668 IFT57Q9NWB7 429 aa21.62■■□□□ 1.05
TMEM88-202ENST00000574668 A0A087WZG4 1122 aa21.61■■□□□ 1.05
TMEM88-202ENST00000574668 CHL1O00533 1208 aa21.61■■□□□ 1.05
TMEM88-202ENST00000574668 KLRG1Q96E93 195 aa21.61■■□□□ 1.05
TMEM88-202ENST00000574668 ZNF219Q9P2Y4 722 aaPredicted RBP21.61■■□□□ 1.05
TMEM88-202ENST00000574668 IL16Q14005 1332 aa21.6■■□□□ 1.05
TMEM88-202ENST00000574668 HNRNPUQ00839 825 aaKnown RBP eCLIP21.6■■□□□ 1.05
TMEM88-202ENST00000574668 ZC3H4Q9UPT8 1303 aaKnown RBP21.59■■□□□ 1.05
TMEM88-202ENST00000574668 GLTPD2A6NH11 291 aa21.59■■□□□ 1.05
TMEM88-202ENST00000574668 A1BGP04217 495 aa21.59■■□□□ 1.05
TMEM88-202ENST00000574668 SMC1BQ8NDV3 1235 aa21.59■■□□□ 1.05
TMEM88-202ENST00000574668 ZNF622Q969S3 477 aaKnown RBP eCLIP21.59■■□□□ 1.05
TMEM88-202ENST00000574668 SCN7AQ01118 1682 aa21.59■■□□□ 1.05
TMEM88-202ENST00000574668 ANKRD31Q8N7Z5 1873 aa21.58■■□□□ 1.05
TMEM88-202ENST00000574668 ZNF853P0CG23 659 aa21.58■■□□□ 1.05
TMEM88-202ENST00000574668 EIF4A1P60842 406 aaKnown RBP21.58■■□□□ 1.05
TMEM88-202ENST00000574668 PRR5LQ6MZQ0 368 aa21.58■■□□□ 1.05
TMEM88-202ENST00000574668 TEX13AQ9BXU3 409 aaPredicted RBP21.58■■□□□ 1.05
TMEM88-202ENST00000574668 TIAM2Q8IVF5 1701 aa21.58■■□□□ 1.04
TMEM88-202ENST00000574668 SNRPA1P09661 255 aaKnown RBP21.57■■□□□ 1.04
TMEM88-202ENST00000574668 MBIPQ9NS73 344 aa21.57■■□□□ 1.04
TMEM88-202ENST00000574668 COL11A2P13942 1736 aaPredicted RBP21.56■■□□□ 1.04
TMEM88-202ENST00000574668 C21orf2O43822 256 aa21.56■■□□□ 1.04
TMEM88-202ENST00000574668 VEGFAP15692 232 aaPredicted RBP21.56■■□□□ 1.04
TMEM88-202ENST00000574668 IL6STP40189 918 aaPredicted RBP21.56■■□□□ 1.04
TMEM88-202ENST00000574668 PIP4K2AP48426 406 aaPredicted RBP21.56■■□□□ 1.04
TMEM88-202ENST00000574668 JMYQ8N9B5 988 aa21.56■■□□□ 1.04
TMEM88-202ENST00000574668 BRIP1Q9BX63 1249 aa21.56■■□□□ 1.04
TMEM88-202ENST00000574668 CAMTA2O94983 1202 aa21.55■■□□□ 1.04
TMEM88-202ENST00000574668 PDE6BP35913 854 aa21.55■■□□□ 1.04
TMEM88-202ENST00000574668 PRAMEF22A3QJZ6 481 aa21.54■■□□□ 1.04
TMEM88-202ENST00000574668 POTECB2RU33 542 aa21.54■■□□□ 1.04
TMEM88-202ENST00000574668 GOLGA2Q08379 1002 aa21.54■■□□□ 1.04
TMEM88-202ENST00000574668 MYH16Q9H6N6 1097 aa21.54■■□□□ 1.04
TMEM88-202ENST00000574668 ZNF521Q96K83 1311 aa21.54■■□□□ 1.04
TMEM88-202ENST00000574668 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
TMEM88-202ENST00000574668 USP16Q9Y5T5 823 aa21.53■■□□□ 1.04
TMEM88-202ENST00000574668 CCDC88AQ3V6T2 1871 aa21.53■■□□□ 1.04
TMEM88-202ENST00000574668 CNBD1Q8NA66 436 aa21.52■■□□□ 1.04
TMEM88-202ENST00000574668 TSR2Q969E8 191 aaKnown RBP21.52■■□□□ 1.04
TMEM88-202ENST00000574668 SETDB2Q96T68 719 aa21.52■■□□□ 1.04
TMEM88-202ENST00000574668 COL13A1Q5TAT6 717 aaPredicted RBP21.51■■□□□ 1.03
TMEM88-202ENST00000574668 DZIP3Q86Y13 1208 aaKnown RBP21.51■■□□□ 1.03
TMEM88-202ENST00000574668 NPHP1O15259 732 aa21.5■■□□□ 1.03
TMEM88-202ENST00000574668 ERFEQ4G0M1 354 aa21.5■■□□□ 1.03
TMEM88-202ENST00000574668 NPM2Q86SE8 214 aaKnown RBP21.5■■□□□ 1.03
TMEM88-202ENST00000574668 PDZRN3Q9UPQ7 1066 aa21.5■■□□□ 1.03
TMEM88-202ENST00000574668 E9PSI1 815 aa21.49■■□□□ 1.03
TMEM88-202ENST00000574668 KRT24Q2M2I5 525 aa21.49■■□□□ 1.03
TMEM88-202ENST00000574668 SPINK5Q9NQ38 1064 aaPredicted RBP21.49■■□□□ 1.03
TMEM88-202ENST00000574668 FANCIQ9NVI1 1328 aa21.49■■□□□ 1.03
TMEM88-202ENST00000574668 BCORQ6W2J9 1755 aa21.48■■□□□ 1.03
TMEM88-202ENST00000574668 ST5P78524 1137 aa21.48■■□□□ 1.03
TMEM88-202ENST00000574668 DUSP27Q5VZP5 1158 aa21.48■■□□□ 1.03
TMEM88-202ENST00000574668 DPY19L2Q6NUT2 758 aa21.48■■□□□ 1.03
TMEM88-202ENST00000574668 PRPF40BQ6NWY9 871 aaKnown RBP21.48■■□□□ 1.03
TMEM88-202ENST00000574668 FER1L6Q2WGJ9 1857 aa21.47■■□□□ 1.03
TMEM88-202ENST00000574668 SRGNP10124 158 aa21.47■■□□□ 1.03
TMEM88-202ENST00000574668 EIF2S2P20042 333 aaKnown RBP21.47■■□□□ 1.03
TMEM88-202ENST00000574668 TAOK3Q9H2K8 898 aa21.47■■□□□ 1.03
TMEM88-202ENST00000574668 SLX4Q8IY92 1834 aa21.46■■□□□ 1.03
TMEM88-202ENST00000574668 ELL2O00472 640 aaPredicted RBP21.46■■□□□ 1.03
TMEM88-202ENST00000574668 HOXB7P09629 217 aa21.46■■□□□ 1.03
TMEM88-202ENST00000574668 SLFN5Q08AF3 891 aa21.46■■□□□ 1.03
TMEM88-202ENST00000574668 STYK1Q6J9G0 422 aa21.46■■□□□ 1.03
TMEM88-202ENST00000574668 CNKSR1Q969H4 720 aa21.46■■□□□ 1.03
TMEM88-202ENST00000574668 PCNTO95613 3336 aa21.45■■□□□ 1.03
TMEM88-202ENST00000574668 CDCA7LQ96GN5 454 aa21.45■■□□□ 1.02
TMEM88-202ENST00000574668 MASTLQ96GX5 879 aa21.45■■□□□ 1.02
TMEM88-202ENST00000574668 ZBED9Q6R2W3 1325 aa21.45■■□□□ 1.02
TMEM88-202ENST00000574668 LTBP3Q9NS15 1303 aa21.45■■□□□ 1.02
TMEM88-202ENST00000574668 CACNA1SQ13698 1873 aa21.44■■□□□ 1.02
TMEM88-202ENST00000574668 DDNO94850 711 aaPredicted RBP21.44■■□□□ 1.02
TMEM88-202ENST00000574668 POTEIP0CG38 1075 aa21.44■■□□□ 1.02
TMEM88-202ENST00000574668 POTEJP0CG39 1038 aa21.44■■□□□ 1.02
TMEM88-202ENST00000574668 NBPF5PQ86XG9 351 aaPredicted RBP21.44■■□□□ 1.02
TMEM88-202ENST00000574668 C8orf58Q8NAV2 365 aa21.44■■□□□ 1.02
TMEM88-202ENST00000574668 CHMP4AQ9BY43 222 aa21.44■■□□□ 1.02
TMEM88-202ENST00000574668 NBPF26B4DH59 902 aa21.43■■□□□ 1.02
TMEM88-202ENST00000574668 EXOSC9Q06265 439 aaKnown RBP21.43■■□□□ 1.02
TMEM88-202ENST00000574668 HDGFL1Q5TGJ6 251 aa21.43■■□□□ 1.02
TMEM88-202ENST00000574668 NBPF10Q6P3W6 841 aaKnown RBP21.43■■□□□ 1.02
TMEM88-202ENST00000574668 NBPF15Q8N660 670 aa21.43■■□□□ 1.02
TMEM88-202ENST00000574668 NECTIN2Q92692 538 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms