RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 SLX4Q8IY92 1834 aa16.49■□□□□ 0.23
POLR2A-202ENST00000573603 DICER1Q9UPY3 1922 aaKnown RBP16.49■□□□□ 0.23
POLR2A-202ENST00000573603 SNRPA1P09661 255 aaKnown RBP16.48■□□□□ 0.23
POLR2A-202ENST00000573603 PDZRN3Q9UPQ7 1066 aa16.48■□□□□ 0.23
POLR2A-202ENST00000573603 KDM3BQ7LBC6 1761 aa16.47■□□□□ 0.23
POLR2A-202ENST00000573603 GLTPD2A6NH11 291 aa16.47■□□□□ 0.23
POLR2A-202ENST00000573603 DNAJC5GQ8N7S2 189 aa16.47■□□□□ 0.23
POLR2A-202ENST00000573603 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.23
POLR2A-202ENST00000573603 SMC1BQ8NDV3 1235 aa16.46■□□□□ 0.23
POLR2A-202ENST00000573603 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
POLR2A-202ENST00000573603 MIS18AQ9NYP9 233 aa16.45■□□□□ 0.22
POLR2A-202ENST00000573603 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
POLR2A-202ENST00000573603 FAM177BA6PVY3 158 aa16.44■□□□□ 0.22
POLR2A-202ENST00000573603 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
POLR2A-202ENST00000573603 NEFMP07197 916 aa16.44■□□□□ 0.22
POLR2A-202ENST00000573603 SRGNP10124 158 aa16.44■□□□□ 0.22
POLR2A-202ENST00000573603 VEGFAP15692 232 aaPredicted RBP16.44■□□□□ 0.22
POLR2A-202ENST00000573603 ERFEQ4G0M1 354 aa16.44■□□□□ 0.22
POLR2A-202ENST00000573603 STYK1Q6J9G0 422 aa16.44■□□□□ 0.22
POLR2A-202ENST00000573603 NBPF10Q6P3W6 841 aaKnown RBP16.44■□□□□ 0.22
POLR2A-202ENST00000573603 NBPF15Q8N660 670 aa16.44■□□□□ 0.22
POLR2A-202ENST00000573603 CNKSR1Q969H4 720 aa16.44■□□□□ 0.22
POLR2A-202ENST00000573603 TAOK3Q9H2K8 898 aa16.44■□□□□ 0.22
POLR2A-202ENST00000573603 HTATSF1O43719 755 aaKnown RBP16.43■□□□□ 0.22
POLR2A-202ENST00000573603 MASTLQ96GX5 879 aa16.43■□□□□ 0.22
POLR2A-202ENST00000573603 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
POLR2A-202ENST00000573603 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
POLR2A-202ENST00000573603 CLEC4GQ6UXB4 293 aa16.42■□□□□ 0.22
POLR2A-202ENST00000573603 KLRG1Q96E93 195 aa16.42■□□□□ 0.22
POLR2A-202ENST00000573603 DPY19L2Q6NUT2 758 aa16.41■□□□□ 0.22
POLR2A-202ENST00000573603 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
POLR2A-202ENST00000573603 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
POLR2A-202ENST00000573603 LTBP3Q9NS15 1303 aa16.41■□□□□ 0.22
POLR2A-202ENST00000573603 HLFQ16534 295 aa16.4■□□□□ 0.22
POLR2A-202ENST00000573603 POTECB2RU33 542 aa16.39■□□□□ 0.21
POLR2A-202ENST00000573603 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
POLR2A-202ENST00000573603 NUP98P52948 1817 aa16.39■□□□□ 0.21
POLR2A-202ENST00000573603 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
POLR2A-202ENST00000573603 NPR1P16066 1061 aa16.38■□□□□ 0.21
POLR2A-202ENST00000573603 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
POLR2A-202ENST00000573603 CCDC93Q567U6 631 aa16.38■□□□□ 0.21
POLR2A-202ENST00000573603 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
POLR2A-202ENST00000573603 PNISRQ8TF01 805 aaKnown RBP16.38■□□□□ 0.21
POLR2A-202ENST00000573603 PLEKHF1Q96S99 279 aa16.38■□□□□ 0.21
POLR2A-202ENST00000573603 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
POLR2A-202ENST00000573603 DDNO94850 711 aaPredicted RBP16.37■□□□□ 0.21
POLR2A-202ENST00000573603 GTF2E1P29083 439 aaPredicted RBP16.37■□□□□ 0.21
POLR2A-202ENST00000573603 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
POLR2A-202ENST00000573603 MYL6BP14649 208 aa16.36■□□□□ 0.21
POLR2A-202ENST00000573603 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
POLR2A-202ENST00000573603 JMYQ8N9B5 988 aa16.36■□□□□ 0.21
POLR2A-202ENST00000573603 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
POLR2A-202ENST00000573603 RGL2O15211 777 aa16.35■□□□□ 0.21
POLR2A-202ENST00000573603 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
POLR2A-202ENST00000573603 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
POLR2A-202ENST00000573603 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
POLR2A-202ENST00000573603 KLRG2A4D1S0 409 aaPredicted RBP16.34■□□□□ 0.21
POLR2A-202ENST00000573603 POTEIP0CG38 1075 aa16.34■□□□□ 0.21
POLR2A-202ENST00000573603 POTEJP0CG39 1038 aa16.34■□□□□ 0.21
POLR2A-202ENST00000573603 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
POLR2A-202ENST00000573603 TTLL7Q6ZT98 887 aa16.34■□□□□ 0.21
POLR2A-202ENST00000573603 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
POLR2A-202ENST00000573603 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
POLR2A-202ENST00000573603 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
POLR2A-202ENST00000573603 GPTP24298 496 aa16.33■□□□□ 0.2
POLR2A-202ENST00000573603 ZNF541Q9H0D2 1346 aa16.33■□□□□ 0.2
POLR2A-202ENST00000573603 SCN4AP35499 1836 aa16.33■□□□□ 0.2
POLR2A-202ENST00000573603 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
POLR2A-202ENST00000573603 CHADLQ6NUI6 762 aa16.32■□□□□ 0.2
POLR2A-202ENST00000573603 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
POLR2A-202ENST00000573603 NYXQ9GZU5 481 aa16.32■□□□□ 0.2
POLR2A-202ENST00000573603 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
POLR2A-202ENST00000573603 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
POLR2A-202ENST00000573603 IQCA1LA6NCM1 817 aa16.3■□□□□ 0.2
POLR2A-202ENST00000573603 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
POLR2A-202ENST00000573603 RTKN2Q8IZC4 609 aa16.3■□□□□ 0.2
POLR2A-202ENST00000573603 RPGRQ92834 1020 aaKnown RBP16.3■□□□□ 0.2
POLR2A-202ENST00000573603 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
POLR2A-202ENST00000573603 IARSP41252 1262 aaKnown RBP16.29■□□□□ 0.2
POLR2A-202ENST00000573603 CRY2Q49AN0 593 aa16.29■□□□□ 0.2
POLR2A-202ENST00000573603 COL13A1Q5TAT6 717 aaPredicted RBP16.29■□□□□ 0.2
POLR2A-202ENST00000573603 SUSD4Q5VX71 490 aa16.29■□□□□ 0.2
POLR2A-202ENST00000573603 SYNE4Q8N205 404 aa16.29■□□□□ 0.2
POLR2A-202ENST00000573603 L3MBTL3Q96JM7 780 aaPredicted RBP16.29■□□□□ 0.2
POLR2A-202ENST00000573603 PCNTO95613 3336 aa16.29■□□□□ 0.2
POLR2A-202ENST00000573603 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
POLR2A-202ENST00000573603 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
POLR2A-202ENST00000573603 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
POLR2A-202ENST00000573603 ERBB4Q15303 1308 aa16.28■□□□□ 0.2
POLR2A-202ENST00000573603 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
POLR2A-202ENST00000573603 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
POLR2A-202ENST00000573603 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
POLR2A-202ENST00000573603 RIPK4P57078 832 aa16.28■□□□□ 0.2
POLR2A-202ENST00000573603 EAPPQ56P03 285 aaPredicted RBP16.28■□□□□ 0.2
POLR2A-202ENST00000573603 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
POLR2A-202ENST00000573603 TAF1DQ9H5J8 278 aaPredicted RBP16.28■□□□□ 0.2
POLR2A-202ENST00000573603 COL4A5P29400 1685 aa16.27■□□□□ 0.2
POLR2A-202ENST00000573603 NTSR2O95665 410 aa16.27■□□□□ 0.2
POLR2A-202ENST00000573603 ANXA1P04083 346 aa16.27■□□□□ 0.2
POLR2A-202ENST00000573603 LDHDQ86WU2 507 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms