RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 NPM2Q86SE8 214 aaKnown RBP16.15■□□□□ 0.18
TRIM25-207ENST00000573108 NPHP1O15259 732 aa16.14■□□□□ 0.17
TRIM25-207ENST00000573108 MCM10Q7L590 875 aa16.14■□□□□ 0.17
TRIM25-207ENST00000573108 CFAP53Q96M91 514 aa16.14■□□□□ 0.17
TRIM25-207ENST00000573108 SRGNP10124 158 aa16.13■□□□□ 0.17
TRIM25-207ENST00000573108 ST5P78524 1137 aa16.13■□□□□ 0.17
TRIM25-207ENST00000573108 DPY19L2Q6NUT2 758 aa16.13■□□□□ 0.17
TRIM25-207ENST00000573108 PRPF40BQ6NWY9 871 aaKnown RBP16.13■□□□□ 0.17
TRIM25-207ENST00000573108 TAOK3Q9H2K8 898 aa16.13■□□□□ 0.17
TRIM25-207ENST00000573108 U2AF1L5P0DN76 240 aaPredicted RBP16.12■□□□□ 0.17
TRIM25-207ENST00000573108 U2AF1Q01081 240 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRIM25-207ENST00000573108 DCTN1Q14203 1278 aa16.12■□□□□ 0.17
TRIM25-207ENST00000573108 STYK1Q6J9G0 422 aa16.12■□□□□ 0.17
TRIM25-207ENST00000573108 CNKSR1Q969H4 720 aa16.12■□□□□ 0.17
TRIM25-207ENST00000573108 MASTLQ96GX5 879 aa16.12■□□□□ 0.17
TRIM25-207ENST00000573108 LTBP3Q9NS15 1303 aa16.12■□□□□ 0.17
TRIM25-207ENST00000573108 DDNO94850 711 aaPredicted RBP16.11■□□□□ 0.17
TRIM25-207ENST00000573108 PPP2R1AP30153 589 aa16.11■□□□□ 0.17
TRIM25-207ENST00000573108 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
TRIM25-207ENST00000573108 NBPF26B4DH59 902 aa16.1■□□□□ 0.17
TRIM25-207ENST00000573108 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
TRIM25-207ENST00000573108 POTEIP0CG38 1075 aa16.1■□□□□ 0.17
TRIM25-207ENST00000573108 POTEJP0CG39 1038 aa16.1■□□□□ 0.17
TRIM25-207ENST00000573108 NBPF10Q6P3W6 841 aaKnown RBP16.1■□□□□ 0.17
TRIM25-207ENST00000573108 NBPF5PQ86XG9 351 aaPredicted RBP16.1■□□□□ 0.17
TRIM25-207ENST00000573108 NBPF15Q8N660 670 aa16.1■□□□□ 0.17
TRIM25-207ENST00000573108 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
TRIM25-207ENST00000573108 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
TRIM25-207ENST00000573108 C7orf43Q8WVR3 580 aa16.09■□□□□ 0.17
TRIM25-207ENST00000573108 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.16
TRIM25-207ENST00000573108 FAM177BA6PVY3 158 aa16.07■□□□□ 0.16
TRIM25-207ENST00000573108 HSPA1AP0DMV8 641 aaKnown RBP16.07■□□□□ 0.16
TRIM25-207ENST00000573108 HSPA1BP0DMV9 641 aaKnown RBP16.07■□□□□ 0.16
TRIM25-207ENST00000573108 SOGA3Q5TF21 947 aa16.07■□□□□ 0.16
TRIM25-207ENST00000573108 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
TRIM25-207ENST00000573108 OLFM4Q6UX06 510 aa16.07■□□□□ 0.16
TRIM25-207ENST00000573108 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
TRIM25-207ENST00000573108 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
TRIM25-207ENST00000573108 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
TRIM25-207ENST00000573108 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
TRIM25-207ENST00000573108 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
TRIM25-207ENST00000573108 NPR1P16066 1061 aa16.06■□□□□ 0.16
TRIM25-207ENST00000573108 HLFQ16534 295 aa16.06■□□□□ 0.16
TRIM25-207ENST00000573108 CAPN15O75808 1086 aa16.05■□□□□ 0.16
TRIM25-207ENST00000573108 CCDC93Q567U6 631 aa16.05■□□□□ 0.16
TRIM25-207ENST00000573108 SCN4AP35499 1836 aa16.05■□□□□ 0.16
TRIM25-207ENST00000573108 KDM3BQ7LBC6 1761 aa16.05■□□□□ 0.16
TRIM25-207ENST00000573108 HTATSF1O43719 755 aaKnown RBP16.04■□□□□ 0.16
TRIM25-207ENST00000573108 FKBP4Q02790 459 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRIM25-207ENST00000573108 TAF7Q15545 349 aaPredicted RBP16.04■□□□□ 0.16
TRIM25-207ENST00000573108 TPTE2Q6XPS3 522 aa16.04■□□□□ 0.16
TRIM25-207ENST00000573108 TNS4Q8IZW8 715 aa16.04■□□□□ 0.16
TRIM25-207ENST00000573108 ZNF277Q9NRM2 450 aaPredicted RBP16.04■□□□□ 0.16
TRIM25-207ENST00000573108 ZNF541Q9H0D2 1346 aa16.03■□□□□ 0.16
TRIM25-207ENST00000573108 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
TRIM25-207ENST00000573108 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
TRIM25-207ENST00000573108 MKRN1Q9UHC7 482 aaKnown RBP16.03■□□□□ 0.16
TRIM25-207ENST00000573108 NUP98P52948 1817 aa16.03■□□□□ 0.16
TRIM25-207ENST00000573108 RGL2O15211 777 aa16.02■□□□□ 0.16
TRIM25-207ENST00000573108 NGEFQ8N5V2 710 aa16.02■□□□□ 0.16
TRIM25-207ENST00000573108 L3MBTL3Q96JM7 780 aaPredicted RBP16.02■□□□□ 0.16
TRIM25-207ENST00000573108 TAF1DQ9H5J8 278 aaPredicted RBP16.02■□□□□ 0.16
TRIM25-207ENST00000573108 ABCC12Q96J65 1359 aa16.01■□□□□ 0.15
TRIM25-207ENST00000573108 IQCA1LA6NCM1 817 aa16.01■□□□□ 0.15
TRIM25-207ENST00000573108 PASKQ96RG2 1323 aa16■□□□□ 0.15
TRIM25-207ENST00000573108 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
TRIM25-207ENST00000573108 LDHDQ86WU2 507 aa16■□□□□ 0.15
TRIM25-207ENST00000573108 NUTM1Q86Y26 1132 aa16■□□□□ 0.15
TRIM25-207ENST00000573108 SNED1Q8TER0 1413 aa16■□□□□ 0.15
TRIM25-207ENST00000573108 ADAMTSL1Q8N6G6 1762 aa16■□□□□ 0.15
TRIM25-207ENST00000573108 GTF2E1P29083 439 aaPredicted RBP15.99■□□□□ 0.15
TRIM25-207ENST00000573108 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
TRIM25-207ENST00000573108 IARSP41252 1262 aaKnown RBP15.99■□□□□ 0.15
TRIM25-207ENST00000573108 EAPPQ56P03 285 aaPredicted RBP15.99■□□□□ 0.15
TRIM25-207ENST00000573108 TTLL7Q6ZT98 887 aa15.99■□□□□ 0.15
TRIM25-207ENST00000573108 RTKN2Q8IZC4 609 aa15.99■□□□□ 0.15
TRIM25-207ENST00000573108 SYNE4Q8N205 404 aa15.99■□□□□ 0.15
TRIM25-207ENST00000573108 THUMPD2Q9BTF0 503 aaKnown RBP15.99■□□□□ 0.15
TRIM25-207ENST00000573108 RRP7AQ9Y3A4 280 aaKnown RBP15.99■□□□□ 0.15
TRIM25-207ENST00000573108 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
TRIM25-207ENST00000573108 DDX10Q13206 875 aaKnown RBP15.98■□□□□ 0.15
TRIM25-207ENST00000573108 SLC51AQ86UW1 340 aa15.98■□□□□ 0.15
TRIM25-207ENST00000573108 PLEKHF1Q96S99 279 aa15.98■□□□□ 0.15
TRIM25-207ENST00000573108 COL4A5P29400 1685 aa15.98■□□□□ 0.15
TRIM25-207ENST00000573108 CNTNAP1P78357 1384 aa15.98■□□□□ 0.15
TRIM25-207ENST00000573108 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
TRIM25-207ENST00000573108 MAP3K15Q6ZN16 1313 aa15.97■□□□□ 0.15
TRIM25-207ENST00000573108 UBN2Q6ZU65 1347 aa15.97■□□□□ 0.15
TRIM25-207ENST00000573108 ERVV-1B6SEH8 477 aa15.97■□□□□ 0.15
TRIM25-207ENST00000573108 FZD9O00144 591 aa15.97■□□□□ 0.15
TRIM25-207ENST00000573108 ITGBL1O95965 494 aaPredicted RBP15.97■□□□□ 0.15
TRIM25-207ENST00000573108 MYL6BP14649 208 aa15.97■□□□□ 0.15
TRIM25-207ENST00000573108 CRY2Q49AN0 593 aa15.97■□□□□ 0.15
TRIM25-207ENST00000573108 HACL1Q9UJ83 578 aa15.97■□□□□ 0.15
TRIM25-207ENST00000573108 GPTP24298 496 aa15.96■□□□□ 0.15
TRIM25-207ENST00000573108 EPHX2P34913 555 aa15.96■□□□□ 0.15
TRIM25-207ENST00000573108 PNISRQ8TF01 805 aaKnown RBP15.96■□□□□ 0.15
TRIM25-207ENST00000573108 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
TRIM25-207ENST00000573108 ZBTB3Q9H5J0 574 aa15.96■□□□□ 0.15
TRIM25-207ENST00000573108 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 255.5 ms