RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 CDHR5Q9HBB8 845 aa12.74□□□□□ -0.37
NPLOC4-210ENST00000572824 WWC3Q9ULE0 1092 aa12.74□□□□□ -0.37
NPLOC4-210ENST00000572824 KIAA1551Q9HCM1 1747 aa12.74□□□□□ -0.37
NPLOC4-210ENST00000572824 FCHSD2O94868 740 aa12.73□□□□□ -0.37
NPLOC4-210ENST00000572824 YBX3P16989 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
NPLOC4-210ENST00000572824 EIF4G2P78344 907 aaKnown RBP eCLIP12.73□□□□□ -0.372e-15■■■■□ 23.9
NPLOC4-210ENST00000572824 PTGDRQ13258 359 aa12.73□□□□□ -0.37
NPLOC4-210ENST00000572824 ITPK1Q13572 414 aa12.73□□□□□ -0.37
NPLOC4-210ENST00000572824 TSR1Q2NL82 804 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-210ENST00000572824 ZNF784Q8NCA9 323 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-210ENST00000572824 ADAM33Q9BZ11 813 aa12.73□□□□□ -0.37
NPLOC4-210ENST00000572824 ASAP1Q9ULH1 1129 aa12.73□□□□□ -0.37
NPLOC4-210ENST00000572824 TJP1Q07157 1748 aa12.73□□□□□ -0.37
NPLOC4-210ENST00000572824 IGSF1Q8N6C5 1336 aa12.72□□□□□ -0.37
NPLOC4-210ENST00000572824 PHKG2P15735 406 aa12.72□□□□□ -0.37
NPLOC4-210ENST00000572824 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-210ENST00000572824 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
NPLOC4-210ENST00000572824 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
NPLOC4-210ENST00000572824 KDRP35968 1356 aa12.71□□□□□ -0.37
NPLOC4-210ENST00000572824 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
NPLOC4-210ENST00000572824 C6orf132Q5T0Z8 1188 aa12.71□□□□□ -0.37
NPLOC4-210ENST00000572824 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
NPLOC4-210ENST00000572824 SLC24A3Q9HC58 644 aa12.71□□□□□ -0.37
NPLOC4-210ENST00000572824 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.38
NPLOC4-210ENST00000572824 HIC1Q14526 733 aa12.7□□□□□ -0.38
NPLOC4-210ENST00000572824 KIF7Q2M1P5 1343 aa12.69□□□□□ -0.38
NPLOC4-210ENST00000572824 GNPATO15228 680 aa12.69□□□□□ -0.38
NPLOC4-210ENST00000572824 POLD1P28340 1107 aa12.69□□□□□ -0.38
NPLOC4-210ENST00000572824 GPR162Q16538 588 aa12.69□□□□□ -0.38
NPLOC4-210ENST00000572824 SLC16A10Q8TF71 515 aa12.69□□□□□ -0.38
NPLOC4-210ENST00000572824 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
NPLOC4-210ENST00000572824 SIK1P57059 783 aa12.68□□□□□ -0.38
NPLOC4-210ENST00000572824 ATG3Q9NT62 314 aa12.68□□□□□ -0.38
NPLOC4-210ENST00000572824 TMOD3Q9NYL9 352 aa12.68□□□□□ -0.38
NPLOC4-210ENST00000572824 SPG7Q9UQ90 795 aa12.68□□□□□ -0.38
NPLOC4-210ENST00000572824 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-210ENST00000572824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-210ENST00000572824 KRI1Q8N9T8 703 aaKnown RBP12.67□□□□□ -0.38
NPLOC4-210ENST00000572824 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
NPLOC4-210ENST00000572824 AK7Q96M32 723 aa12.67□□□□□ -0.38
NPLOC4-210ENST00000572824 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
NPLOC4-210ENST00000572824 ADAMTS7Q9UKP4 1686 aa12.67□□□□□ -0.38
NPLOC4-210ENST00000572824 KIF13BQ9NQT8 1826 aa12.67□□□□□ -0.38
NPLOC4-210ENST00000572824 FECHP22830 423 aa12.66□□□□□ -0.38
NPLOC4-210ENST00000572824 CNGB1Q14028 1251 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-210ENST00000572824 MORC1Q86VD1 984 aa12.66□□□□□ -0.38
NPLOC4-210ENST00000572824 IFNL2Q8IZJ0 200 aa12.66□□□□□ -0.38
NPLOC4-210ENST00000572824 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
NPLOC4-210ENST00000572824 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
NPLOC4-210ENST00000572824 ZNF530Q6P9A1 599 aaPredicted RBP12.65□□□□□ -0.38
NPLOC4-210ENST00000572824 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
NPLOC4-210ENST00000572824 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
NPLOC4-210ENST00000572824 MARVELD3Q96A59 401 aa12.64□□□□□ -0.39
NPLOC4-210ENST00000572824 COL3A1P02461 1466 aaPredicted RBP12.64□□□□□ -0.39
NPLOC4-210ENST00000572824 IL13P35225 146 aa12.63□□□□□ -0.39
NPLOC4-210ENST00000572824 SULT6B1Q6IMI4 303 aa12.63□□□□□ -0.39
NPLOC4-210ENST00000572824 EMP3P54852 163 aa12.62□□□□□ -0.39
NPLOC4-210ENST00000572824 MAP2K5Q13163 448 aa12.62□□□□□ -0.39
NPLOC4-210ENST00000572824 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
NPLOC4-210ENST00000572824 HMOX1P09601 288 aa12.61□□□□□ -0.39
NPLOC4-210ENST00000572824 VARS2Q5ST30 1063 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-210ENST00000572824 CC2D1BQ5T0F9 858 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-210ENST00000572824 KCPQ6ZWJ8 1503 aa12.61□□□□□ -0.39
NPLOC4-210ENST00000572824 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
NPLOC4-210ENST00000572824 MRC1P22897 1456 aa12.6□□□□□ -0.39
NPLOC4-210ENST00000572824 PTCD1O75127 700 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-210ENST00000572824 PTPREP23469 700 aa12.6□□□□□ -0.39
NPLOC4-210ENST00000572824 SSFA2P28290 1259 aa12.6□□□□□ -0.39
NPLOC4-210ENST00000572824 LCE2DQ5TA82 110 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-210ENST00000572824 KNSTRNQ9Y448 316 aa12.6□□□□□ -0.39
NPLOC4-210ENST00000572824 SIPA1L3O60292 1781 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-210ENST00000572824 ATP10DQ9P241 1426 aa12.6□□□□□ -0.39
NPLOC4-210ENST00000572824 IRF6O14896 467 aa12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 PER1O15534 1290 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 MMP10P09238 476 aa12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 COL9A1P20849 921 aa12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 MTHFSP49914 203 aa12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 DCAF5Q96JK2 942 aa12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 LGR6Q9HBX8 967 aa12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 SRP68Q9UHB9 627 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 AFDNP55196 1824 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-210ENST00000572824 CABP4P57796 275 aa12.58□□□□□ -0.4
NPLOC4-210ENST00000572824 C10orf71Q711Q0 1435 aa12.58□□□□□ -0.4
NPLOC4-210ENST00000572824 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
NPLOC4-210ENST00000572824 ADCY9O60503 1353 aa12.57□□□□□ -0.4
NPLOC4-210ENST00000572824 ERVV-2B6SEH9 535 aa12.57□□□□□ -0.4
NPLOC4-210ENST00000572824 SLC39A6Q13433 755 aa12.57□□□□□ -0.4
NPLOC4-210ENST00000572824 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
NPLOC4-210ENST00000572824 CD2APQ9Y5K6 639 aa12.57□□□□□ -0.4
NPLOC4-210ENST00000572824 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
NPLOC4-210ENST00000572824 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
NPLOC4-210ENST00000572824 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
NPLOC4-210ENST00000572824 GYS1P13807 737 aa12.56□□□□□ -0.4
NPLOC4-210ENST00000572824 ZNF526Q8TF50 670 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-210ENST00000572824 CCDC102AQ96A19 550 aa12.56□□□□□ -0.4
NPLOC4-210ENST00000572824 CNTNAP4Q9C0A0 1308 aa12.56□□□□□ -0.4
NPLOC4-210ENST00000572824 CRKLP46109 303 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-210ENST00000572824 PRSS12P56730 875 aa12.55□□□□□ -0.4
NPLOC4-210ENST00000572824 C1QTNF8P60827 252 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms