RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 C21orf2O43822 256 aa18.35■□□□□ 0.53
GTF3C1-211ENST00000569653 TOMM70O94826 608 aa18.35■□□□□ 0.53
GTF3C1-211ENST00000569653 SRGNP10124 158 aa18.35■□□□□ 0.53
GTF3C1-211ENST00000569653 CLEC4GQ6UXB4 293 aa18.35■□□□□ 0.53
GTF3C1-211ENST00000569653 WDR90Q96KV7 1748 aa18.35■□□□□ 0.53
GTF3C1-211ENST00000569653 LMNB1P20700 586 aa18.34■□□□□ 0.53
GTF3C1-211ENST00000569653 PDE6BP35913 854 aa18.34■□□□□ 0.53
GTF3C1-211ENST00000569653 RALBP1Q15311 655 aa18.33■□□□□ 0.52
GTF3C1-211ENST00000569653 TTLL7Q6ZT98 887 aa18.33■□□□□ 0.52
GTF3C1-211ENST00000569653 RRAGCQ9HB90 399 aa18.33■□□□□ 0.52
GTF3C1-211ENST00000569653 ABCC12Q96J65 1359 aa18.32■□□□□ 0.52
GTF3C1-211ENST00000569653 PRPF40BQ6NWY9 871 aaKnown RBP18.32■□□□□ 0.52
GTF3C1-211ENST00000569653 NBPF5PQ86XG9 351 aaPredicted RBP18.32■□□□□ 0.52
GTF3C1-211ENST00000569653 NIP7Q9Y221 180 aaKnown RBP eCLIP18.32■□□□□ 0.52
GTF3C1-211ENST00000569653 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 KLRG2A4D1S0 409 aaPredicted RBP18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 FAM177BA6PVY3 158 aa18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 ST5P78524 1137 aa18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 STYK1Q6J9G0 422 aa18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 LRP10Q7Z4F1 713 aa18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 PNISRQ8TF01 805 aaKnown RBP18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 C7orf43Q8WVR3 580 aa18.31■□□□□ 0.52
GTF3C1-211ENST00000569653 KDM2BQ8NHM5 1336 aa18.3■□□□□ 0.52
GTF3C1-211ENST00000569653 ZC3H4Q9UPT8 1303 aaKnown RBP18.3■□□□□ 0.52
GTF3C1-211ENST00000569653 POTECB2RU33 542 aa18.3■□□□□ 0.52
GTF3C1-211ENST00000569653 RGL2O15211 777 aa18.3■□□□□ 0.52
GTF3C1-211ENST00000569653 OLFM4Q6UX06 510 aa18.3■□□□□ 0.52
GTF3C1-211ENST00000569653 CCDC146Q8IYE0 955 aa18.3■□□□□ 0.52
GTF3C1-211ENST00000569653 RBM46Q8TBY0 533 aaKnown RBP18.3■□□□□ 0.52
GTF3C1-211ENST00000569653 PDZRN3Q9UPQ7 1066 aa18.3■□□□□ 0.52
GTF3C1-211ENST00000569653 UBN2Q6ZU65 1347 aa18.29■□□□□ 0.52
GTF3C1-211ENST00000569653 MYBBP1AQ9BQG0 1328 aaKnown RBP18.29■□□□□ 0.52
GTF3C1-211ENST00000569653 NEFMP07197 916 aa18.29■□□□□ 0.52
GTF3C1-211ENST00000569653 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
GTF3C1-211ENST00000569653 RIPK4P57078 832 aa18.29■□□□□ 0.52
GTF3C1-211ENST00000569653 SLC51AQ86UW1 340 aa18.29■□□□□ 0.52
GTF3C1-211ENST00000569653 MASTLQ96GX5 879 aa18.29■□□□□ 0.52
GTF3C1-211ENST00000569653 ZNF652Q9Y2D9 606 aa18.29■□□□□ 0.52
GTF3C1-211ENST00000569653 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
GTF3C1-211ENST00000569653 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
GTF3C1-211ENST00000569653 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
GTF3C1-211ENST00000569653 MYL6BP14649 208 aa18.28■□□□□ 0.52
GTF3C1-211ENST00000569653 HTRA3P83110 453 aa18.28■□□□□ 0.52
GTF3C1-211ENST00000569653 PDIA6Q15084 440 aa18.28■□□□□ 0.52
GTF3C1-211ENST00000569653 PROSER3Q2NL68 480 aa18.28■□□□□ 0.52
GTF3C1-211ENST00000569653 DNAJC5GQ8N7S2 189 aa18.28■□□□□ 0.52
GTF3C1-211ENST00000569653 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
GTF3C1-211ENST00000569653 ANKRD36CQ5JPF3 1778 aa18.27■□□□□ 0.52
GTF3C1-211ENST00000569653 LTBP3Q9NS15 1303 aa18.27■□□□□ 0.52
GTF3C1-211ENST00000569653 NPHP1O15259 732 aa18.27■□□□□ 0.52
GTF3C1-211ENST00000569653 CNKSR1Q969H4 720 aa18.27■□□□□ 0.52
GTF3C1-211ENST00000569653 ANXA1P04083 346 aa18.26■□□□□ 0.51
GTF3C1-211ENST00000569653 KRT24Q2M2I5 525 aa18.26■□□□□ 0.51
GTF3C1-211ENST00000569653 NUTM1Q86Y26 1132 aa18.26■□□□□ 0.51
GTF3C1-211ENST00000569653 ZBTB3Q9H5J0 574 aa18.26■□□□□ 0.51
GTF3C1-211ENST00000569653 TSPYL4Q9UJ04 414 aa18.26■□□□□ 0.51
GTF3C1-211ENST00000569653 TRIM35Q9UPQ4 493 aa18.26■□□□□ 0.51
GTF3C1-211ENST00000569653 LAMB2P55268 1798 aa18.25■□□□□ 0.51
GTF3C1-211ENST00000569653 ERVV-1B6SEH8 477 aa18.25■□□□□ 0.51
GTF3C1-211ENST00000569653 NPR1P16066 1061 aa18.25■□□□□ 0.51
GTF3C1-211ENST00000569653 GPTP24298 496 aa18.25■□□□□ 0.51
GTF3C1-211ENST00000569653 APLP1P51693 650 aa18.25■□□□□ 0.51
GTF3C1-211ENST00000569653 TAOK3Q9H2K8 898 aa18.25■□□□□ 0.51
GTF3C1-211ENST00000569653 PNNQ9H307 717 aaKnown RBP18.25■□□□□ 0.51
GTF3C1-211ENST00000569653 ERFEQ4G0M1 354 aa18.24■□□□□ 0.51
GTF3C1-211ENST00000569653 TPTE2Q6XPS3 522 aa18.24■□□□□ 0.51
GTF3C1-211ENST00000569653 C3orf67Q6ZVT6 689 aa18.24■□□□□ 0.51
GTF3C1-211ENST00000569653 COL4A5P29400 1685 aa18.24■□□□□ 0.51
GTF3C1-211ENST00000569653 PCNTO95613 3336 aa18.24■□□□□ 0.51
GTF3C1-211ENST00000569653 CRY2Q49AN0 593 aa18.23■□□□□ 0.51
GTF3C1-211ENST00000569653 SUSD4Q5VX71 490 aa18.23■□□□□ 0.51
GTF3C1-211ENST00000569653 ZNF34Q8IZ26 560 aa18.23■□□□□ 0.51
GTF3C1-211ENST00000569653 ADAMTS8Q9UP79 889 aa18.23■□□□□ 0.51
GTF3C1-211ENST00000569653 RIC1Q4ADV7 1423 aa18.23■□□□□ 0.51
GTF3C1-211ENST00000569653 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
GTF3C1-211ENST00000569653 FSTL1Q12841 308 aa18.22■□□□□ 0.51
GTF3C1-211ENST00000569653 NEUROD2Q15784 382 aa18.22■□□□□ 0.51
GTF3C1-211ENST00000569653 C16orf71Q8IYS4 520 aaPredicted RBP18.22■□□□□ 0.51
GTF3C1-211ENST00000569653 IBTKQ9P2D0 1353 aaPredicted RBP18.21■□□□□ 0.51
GTF3C1-211ENST00000569653 NTSR2O95665 410 aa18.21■□□□□ 0.51
GTF3C1-211ENST00000569653 VEGFAP15692 232 aaPredicted RBP18.21■□□□□ 0.51
GTF3C1-211ENST00000569653 EIF2S2P20042 333 aaKnown RBP18.21■□□□□ 0.51
GTF3C1-211ENST00000569653 KIF6Q6ZMV9 814 aa18.21■□□□□ 0.51
GTF3C1-211ENST00000569653 TAF1P21675 1872 aa18.2■□□□□ 0.5
GTF3C1-211ENST00000569653 CHL1O00533 1208 aa18.2■□□□□ 0.5
GTF3C1-211ENST00000569653 DDNO94850 711 aaPredicted RBP18.2■□□□□ 0.5
GTF3C1-211ENST00000569653 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
GTF3C1-211ENST00000569653 GIGYF2Q6Y7W6 1299 aaKnown RBP18.2■□□□□ 0.5
GTF3C1-211ENST00000569653 NECTIN2Q92692 538 aa18.2■□□□□ 0.5
GTF3C1-211ENST00000569653 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
GTF3C1-211ENST00000569653 BABAM1Q9NWV8 329 aa18.2■□□□□ 0.5
GTF3C1-211ENST00000569653 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
GTF3C1-211ENST00000569653 RUNDC1Q96C34 613 aa18.19■□□□□ 0.5
GTF3C1-211ENST00000569653 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
GTF3C1-211ENST00000569653 ZNF541Q9H0D2 1346 aa18.19■□□□□ 0.5
GTF3C1-211ENST00000569653 POTEIP0CG38 1075 aa18.18■□□□□ 0.5
GTF3C1-211ENST00000569653 POTEJP0CG39 1038 aa18.18■□□□□ 0.5
GTF3C1-211ENST00000569653 SMC1BQ8NDV3 1235 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms