RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 SOGA3Q5TF21 947 aa16.16■□□□□ 0.18
FANCA-232ENST00000568983 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
FANCA-232ENST00000568983 ZNF652Q9Y2D9 606 aa16.16■□□□□ 0.18
FANCA-232ENST00000568983 NPC1L1Q9UHC9 1359 aa16.15■□□□□ 0.18
FANCA-232ENST00000568983 PCNTO95613 3336 aa16.15■□□□□ 0.18
FANCA-232ENST00000568983 PIP4K2AP48426 406 aaPredicted RBP16.15■□□□□ 0.18
FANCA-232ENST00000568983 NBPF5PQ86XG9 351 aaPredicted RBP16.15■□□□□ 0.18
FANCA-232ENST00000568983 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
FANCA-232ENST00000568983 MASTLQ96GX5 879 aa16.15■□□□□ 0.18
FANCA-232ENST00000568983 SLX4Q8IY92 1834 aa16.15■□□□□ 0.18
FANCA-232ENST00000568983 CEMIPQ8WUJ3 1361 aa16.14■□□□□ 0.17
FANCA-232ENST00000568983 STYK1Q6J9G0 422 aa16.14■□□□□ 0.17
FANCA-232ENST00000568983 LTBP3Q9NS15 1303 aa16.14■□□□□ 0.17
FANCA-232ENST00000568983 POTECB2RU33 542 aa16.13■□□□□ 0.17
FANCA-232ENST00000568983 KCNQ3O43525 872 aa16.13■□□□□ 0.17
FANCA-232ENST00000568983 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
FANCA-232ENST00000568983 NUDCQ9Y266 331 aa16.13■□□□□ 0.17
FANCA-232ENST00000568983 IQCA1LA6NCM1 817 aa16.12■□□□□ 0.17
FANCA-232ENST00000568983 DDNO94850 711 aaPredicted RBP16.12■□□□□ 0.17
FANCA-232ENST00000568983 SRGNP10124 158 aa16.12■□□□□ 0.17
FANCA-232ENST00000568983 PHACTR3Q96KR7 559 aa16.12■□□□□ 0.17
FANCA-232ENST00000568983 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
FANCA-232ENST00000568983 U2AF1L5P0DN76 240 aaPredicted RBP16.11■□□□□ 0.17
FANCA-232ENST00000568983 U2AF1Q01081 240 aaKnown RBP eCLIP16.11■□□□□ 0.17
FANCA-232ENST00000568983 CCDC93Q567U6 631 aa16.11■□□□□ 0.17
FANCA-232ENST00000568983 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
FANCA-232ENST00000568983 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
FANCA-232ENST00000568983 MKRN1Q9UHC7 482 aaKnown RBP16.11■□□□□ 0.17
FANCA-232ENST00000568983 USP16Q9Y5T5 823 aa16.11■□□□□ 0.17
FANCA-232ENST00000568983 PRAMEF22A3QJZ6 481 aa16.1■□□□□ 0.17
FANCA-232ENST00000568983 FAM177BA6PVY3 158 aa16.1■□□□□ 0.17
FANCA-232ENST00000568983 POTEIP0CG38 1075 aa16.1■□□□□ 0.17
FANCA-232ENST00000568983 POTEJP0CG39 1038 aa16.1■□□□□ 0.17
FANCA-232ENST00000568983 MCM10Q7L590 875 aa16.1■□□□□ 0.17
FANCA-232ENST00000568983 NPR1P16066 1061 aa16.09■□□□□ 0.17
FANCA-232ENST00000568983 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
FANCA-232ENST00000568983 EAPPQ56P03 285 aaPredicted RBP16.09■□□□□ 0.17
FANCA-232ENST00000568983 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
FANCA-232ENST00000568983 NIP7Q9Y221 180 aaKnown RBP eCLIP16.09■□□□□ 0.17
FANCA-232ENST00000568983 SCN4AP35499 1836 aa16.08■□□□□ 0.17
FANCA-232ENST00000568983 TPTE2Q6XPS3 522 aa16.08■□□□□ 0.16
FANCA-232ENST00000568983 LDHDQ86WU2 507 aa16.07■□□□□ 0.16
FANCA-232ENST00000568983 ZNF277Q9NRM2 450 aaPredicted RBP16.07■□□□□ 0.16
FANCA-232ENST00000568983 LAMB4A4D0S4 1761 aa16.07■□□□□ 0.16
FANCA-232ENST00000568983 FKBP4Q02790 459 aaKnown RBP eCLIP16.06■□□□□ 0.16
FANCA-232ENST00000568983 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
FANCA-232ENST00000568983 NEFMP07197 916 aa16.05■□□□□ 0.16
FANCA-232ENST00000568983 DCTN1Q14203 1278 aa16.05■□□□□ 0.16
FANCA-232ENST00000568983 RTKN2Q8IZC4 609 aa16.05■□□□□ 0.16
FANCA-232ENST00000568983 L3MBTL3Q96JM7 780 aaPredicted RBP16.05■□□□□ 0.16
FANCA-232ENST00000568983 TAF1DQ9H5J8 278 aaPredicted RBP16.05■□□□□ 0.16
FANCA-232ENST00000568983 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
FANCA-232ENST00000568983 ZNF541Q9H0D2 1346 aa16.04■□□□□ 0.16
FANCA-232ENST00000568983 ALDH1B1P30837 517 aa16.04■□□□□ 0.16
FANCA-232ENST00000568983 OLFM4Q6UX06 510 aa16.04■□□□□ 0.16
FANCA-232ENST00000568983 AIDAQ96BJ3 306 aa16.04■□□□□ 0.16
FANCA-232ENST00000568983 CNTNAP1P78357 1384 aa16.03■□□□□ 0.16
FANCA-232ENST00000568983 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
FANCA-232ENST00000568983 RNF123Q5XPI4 1314 aa16.02■□□□□ 0.16
FANCA-232ENST00000568983 TMEM88BA6NKF7 163 aa16.02■□□□□ 0.16
FANCA-232ENST00000568983 NBPF26B4DH59 902 aa16.02■□□□□ 0.16
FANCA-232ENST00000568983 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.16
FANCA-232ENST00000568983 PPP2R1AP30153 589 aa16.02■□□□□ 0.16
FANCA-232ENST00000568983 EPHX2P34913 555 aa16.02■□□□□ 0.16
FANCA-232ENST00000568983 IARSP41252 1262 aaKnown RBP16.02■□□□□ 0.16
FANCA-232ENST00000568983 TAF7Q15545 349 aaPredicted RBP16.02■□□□□ 0.16
FANCA-232ENST00000568983 NBPF10Q6P3W6 841 aaKnown RBP16.02■□□□□ 0.16
FANCA-232ENST00000568983 NBPF15Q8N660 670 aa16.02■□□□□ 0.16
FANCA-232ENST00000568983 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.16
FANCA-232ENST00000568983 JDP2Q8WYK2 163 aa16.02■□□□□ 0.16
FANCA-232ENST00000568983 NYXQ9GZU5 481 aa16.02■□□□□ 0.16
FANCA-232ENST00000568983 PASKQ96RG2 1323 aa16.01■□□□□ 0.15
FANCA-232ENST00000568983 KLRG2A4D1S0 409 aaPredicted RBP16.01■□□□□ 0.15
FANCA-232ENST00000568983 RGL2O15211 777 aa16.01■□□□□ 0.15
FANCA-232ENST00000568983 HLFQ16534 295 aa16.01■□□□□ 0.15
FANCA-232ENST00000568983 KIF6Q6ZMV9 814 aa16.01■□□□□ 0.15
FANCA-232ENST00000568983 PNMA8AQ86V59 439 aaPredicted RBP16.01■□□□□ 0.15
FANCA-232ENST00000568983 RPGRQ92834 1020 aaKnown RBP16.01■□□□□ 0.15
FANCA-232ENST00000568983 MIS18AQ9NYP9 233 aa16.01■□□□□ 0.15
FANCA-232ENST00000568983 SYNE4Q8N205 404 aa16■□□□□ 0.15
FANCA-232ENST00000568983 FOXN1O15353 648 aa15.99■□□□□ 0.15
FANCA-232ENST00000568983 NUTM1Q86Y26 1132 aa15.99■□□□□ 0.15
FANCA-232ENST00000568983 GJA3Q9Y6H8 435 aa15.99■□□□□ 0.15
FANCA-232ENST00000568983 KDM3BQ7LBC6 1761 aa15.99■□□□□ 0.15
FANCA-232ENST00000568983 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
FANCA-232ENST00000568983 NUP98P52948 1817 aa15.98■□□□□ 0.15
FANCA-232ENST00000568983 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
FANCA-232ENST00000568983 LMOD1P29536 600 aaPredicted RBP15.98■□□□□ 0.15
FANCA-232ENST00000568983 VEGFBP49765 207 aa15.98■□□□□ 0.15
FANCA-232ENST00000568983 EIF6P56537 245 aaKnown RBP15.98■□□□□ 0.15
FANCA-232ENST00000568983 MAP1SQ66K74 1059 aaPredicted RBP15.98■□□□□ 0.15
FANCA-232ENST00000568983 GPC2Q8N158 579 aa15.98■□□□□ 0.15
FANCA-232ENST00000568983 PNISRQ8TF01 805 aaKnown RBP15.98■□□□□ 0.15
FANCA-232ENST00000568983 RRP7AQ9Y3A4 280 aaKnown RBP15.98■□□□□ 0.15
FANCA-232ENST00000568983 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
FANCA-232ENST00000568983 FZD9O00144 591 aa15.97■□□□□ 0.15
FANCA-232ENST00000568983 MYL6BP14649 208 aa15.97■□□□□ 0.15
FANCA-232ENST00000568983 GPTP24298 496 aa15.97■□□□□ 0.15
FANCA-232ENST00000568983 CTCFP49711 727 aaPredicted RBP15.97■□□□□ 0.15
FANCA-232ENST00000568983 PSMD1Q99460 953 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms