RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 PYGBP11216 843 aa11.19□□□□□ -0.62
KLHDC4-220ENST00000568338 KCNA3P22001 575 aa11.19□□□□□ -0.62
KLHDC4-220ENST00000568338 ASTLQ6HA08 431 aaPredicted RBP11.19□□□□□ -0.62
KLHDC4-220ENST00000568338 RFC4P35249 363 aa11.18□□□□□ -0.62
KLHDC4-220ENST00000568338 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
KLHDC4-220ENST00000568338 WDR63Q8IWG1 891 aa11.18□□□□□ -0.62
KLHDC4-220ENST00000568338 AIDAQ96BJ3 306 aa11.18□□□□□ -0.62
KLHDC4-220ENST00000568338 PRDM10Q9NQV6 1147 aa11.18□□□□□ -0.62
KLHDC4-220ENST00000568338 ARFGEF1Q9Y6D6 1849 aa11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 GLTPD2A6NH11 291 aa11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 E9PSI1 815 aa11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 GYS1P13807 737 aa11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 CALD1Q05682 793 aaKnown RBP11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 MTHFSDQ2M296 383 aaKnown RBP11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 AMOTQ4VCS5 1084 aa11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 IFNL1Q8IU54 200 aa11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 MKRN1Q9UHC7 482 aaKnown RBP11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 ASAP1Q9ULH1 1129 aa11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 TRIM35Q9UPQ4 493 aa11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
KLHDC4-220ENST00000568338 IL16Q14005 1332 aa11.16□□□□□ -0.62
KLHDC4-220ENST00000568338 FOXN1O15353 648 aa11.16□□□□□ -0.62
KLHDC4-220ENST00000568338 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
KLHDC4-220ENST00000568338 PLEKHO1Q53GL0 409 aaPredicted RBP11.16□□□□□ -0.62
KLHDC4-220ENST00000568338 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
KLHDC4-220ENST00000568338 BRCA1P38398 1863 aaKnown RBP11.16□□□□□ -0.62
KLHDC4-220ENST00000568338 ITGB4P16144 1822 aa11.16□□□□□ -0.62
KLHDC4-220ENST00000568338 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
KLHDC4-220ENST00000568338 LMNB1P20700 586 aa11.15□□□□□ -0.62
KLHDC4-220ENST00000568338 CTCFP49711 727 aaPredicted RBP11.15□□□□□ -0.62
KLHDC4-220ENST00000568338 RASSF7Q02833 373 aa11.15□□□□□ -0.62
KLHDC4-220ENST00000568338 SLFN5Q08AF3 891 aa11.15□□□□□ -0.62
KLHDC4-220ENST00000568338 RTF1Q92541 710 aaKnown RBP11.15□□□□□ -0.62
KLHDC4-220ENST00000568338 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
KLHDC4-220ENST00000568338 BMP2KQ9NSY1 1161 aaPredicted RBP11.15□□□□□ -0.62
KLHDC4-220ENST00000568338 VIRMAQ69YN4 1812 aaKnown RBP11.14□□□□□ -0.63
KLHDC4-220ENST00000568338 GNAT3A8MTJ3 354 aa11.14□□□□□ -0.63
KLHDC4-220ENST00000568338 CHRNA5P30532 468 aa11.14□□□□□ -0.63
KLHDC4-220ENST00000568338 TIE1P35590 1138 aa11.14□□□□□ -0.63
KLHDC4-220ENST00000568338 MYH16Q9H6N6 1097 aa11.14□□□□□ -0.63
KLHDC4-220ENST00000568338 ATG3Q9NT62 314 aa11.14□□□□□ -0.63
KLHDC4-220ENST00000568338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.14□□□□□ -0.63
KLHDC4-220ENST00000568338 KDM6AO15550 1401 aaPredicted RBP11.13□□□□□ -0.63
KLHDC4-220ENST00000568338 RPS6KA4O75676 772 aa11.13□□□□□ -0.63
KLHDC4-220ENST00000568338 AKAP4Q5JQC9 854 aa11.13□□□□□ -0.63
KLHDC4-220ENST00000568338 C1orf141Q5JVX7 400 aa11.13□□□□□ -0.63
KLHDC4-220ENST00000568338 RC3H1Q5TC82 1133 aaKnown RBP11.13□□□□□ -0.63
KLHDC4-220ENST00000568338 DUSP27Q5VZP5 1158 aa11.13□□□□□ -0.63
KLHDC4-220ENST00000568338 ZNF530Q6P9A1 599 aaPredicted RBP11.13□□□□□ -0.63
KLHDC4-220ENST00000568338 CIZ1Q9ULV3 898 aaPredicted RBP11.13□□□□□ -0.63
KLHDC4-220ENST00000568338 ADAMTS7Q9UKP4 1686 aa11.13□□□□□ -0.63
KLHDC4-220ENST00000568338 CNTNAP4Q9C0A0 1308 aa11.12□□□□□ -0.63
KLHDC4-220ENST00000568338 ATN1P54259 1190 aaPredicted RBP11.12□□□□□ -0.63
KLHDC4-220ENST00000568338 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
KLHDC4-220ENST00000568338 TRMT2AQ8IZ69 625 aaKnown RBP11.12□□□□□ -0.63
KLHDC4-220ENST00000568338 IFT57Q9NWB7 429 aa11.12□□□□□ -0.63
KLHDC4-220ENST00000568338 CNTNAP1P78357 1384 aa11.12□□□□□ -0.63
KLHDC4-220ENST00000568338 SCN11AQ9UI33 1791 aa11.11□□□□□ -0.63
KLHDC4-220ENST00000568338 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
KLHDC4-220ENST00000568338 MLLT1Q03111 559 aaPredicted RBP11.11□□□□□ -0.63
KLHDC4-220ENST00000568338 MCM10Q7L590 875 aa11.11□□□□□ -0.63
KLHDC4-220ENST00000568338 IFNL2Q8IZJ0 200 aa11.11□□□□□ -0.63
KLHDC4-220ENST00000568338 ABHD8Q96I13 439 aa11.11□□□□□ -0.63
KLHDC4-220ENST00000568338 THUMPD2Q9BTF0 503 aaKnown RBP11.11□□□□□ -0.63
KLHDC4-220ENST00000568338 TIAM2Q8IVF5 1701 aa11.11□□□□□ -0.63
KLHDC4-220ENST00000568338 FANCIQ9NVI1 1328 aa11.1□□□□□ -0.63
KLHDC4-220ENST00000568338 PHKG2P15735 406 aa11.1□□□□□ -0.63
KLHDC4-220ENST00000568338 GNAI1P63096 354 aa11.1□□□□□ -0.63
KLHDC4-220ENST00000568338 DDR1Q08345 913 aa11.1□□□□□ -0.63
KLHDC4-220ENST00000568338 DCTN1Q14203 1278 aa11.1□□□□□ -0.63
KLHDC4-220ENST00000568338 CEMIPQ8WUJ3 1361 aa11.1□□□□□ -0.63
KLHDC4-220ENST00000568338 USP42Q9H9J4 1324 aaKnown RBP11.09□□□□□ -0.63
KLHDC4-220ENST00000568338 ZNF831Q5JPB2 1677 aa11.09□□□□□ -0.63
KLHDC4-220ENST00000568338 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
KLHDC4-220ENST00000568338 HSP90AB1P08238 724 aaKnown RBP11.09□□□□□ -0.63
KLHDC4-220ENST00000568338 LBX1P52954 281 aa11.09□□□□□ -0.63
KLHDC4-220ENST00000568338 CFAP44Q96MT7 982 aa11.09□□□□□ -0.63
KLHDC4-220ENST00000568338 SRP68Q9UHB9 627 aaKnown RBP11.09□□□□□ -0.63
KLHDC4-220ENST00000568338 SIPA1L3O60292 1781 aaPredicted RBP11.08□□□□□ -0.64
KLHDC4-220ENST00000568338 MRC1P22897 1456 aa11.08□□□□□ -0.64
KLHDC4-220ENST00000568338 ZNF853P0CG23 659 aa11.08□□□□□ -0.64
KLHDC4-220ENST00000568338 LHX8Q68G74 356 aa11.08□□□□□ -0.64
KLHDC4-220ENST00000568338 SLC4A9Q96Q91 983 aa11.08□□□□□ -0.64
KLHDC4-220ENST00000568338 PCDHB8Q9UN66 801 aa11.08□□□□□ -0.64
KLHDC4-220ENST00000568338 LAS1LQ9Y4W2 734 aaKnown RBP11.08□□□□□ -0.64
KLHDC4-220ENST00000568338 COL5A3P25940 1745 aaPredicted RBP11.08□□□□□ -0.64
KLHDC4-220ENST00000568338 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
KLHDC4-220ENST00000568338 CCDC85CA6NKD9 419 aa11.07□□□□□ -0.64
KLHDC4-220ENST00000568338 POLRMTO00411 1230 aaKnown RBP11.07□□□□□ -0.64
KLHDC4-220ENST00000568338 RNMTO43148 476 aaKnown RBP11.07□□□□□ -0.64
KLHDC4-220ENST00000568338 TTLL6Q8N841 843 aa11.07□□□□□ -0.64
KLHDC4-220ENST00000568338 IL17REQ8NFR9 667 aa11.07□□□□□ -0.64
KLHDC4-220ENST00000568338 TSR2Q969E8 191 aaKnown RBP11.07□□□□□ -0.64
KLHDC4-220ENST00000568338 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
KLHDC4-220ENST00000568338 POTECB2RU33 542 aa11.06□□□□□ -0.64
KLHDC4-220ENST00000568338 CT47B1P0C2W7 299 aaPredicted RBP11.06□□□□□ -0.64
KLHDC4-220ENST00000568338 CRKLP46109 303 aaKnown RBP11.06□□□□□ -0.64
KLHDC4-220ENST00000568338 VEGFBP49765 207 aa11.06□□□□□ -0.64
KLHDC4-220ENST00000568338 TEFQ10587 303 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms